Personal tools

FFCP PHASE1:Mm9::chr4:4065921..4065945,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr4:4065921..4065945,- |short_description=p1@Penk |description=CAGE_peak_1_at_Penk_5end |association_with_transcript=16bp_to_uc008rxa.1,uc012dah.1_5end |Entre...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:4065921..4065945,-
|DHSsupport=NA
|short_description=p1@Penk
|DPIdataset=NA
|description=CAGE_peak_1_at_Penk_5end
|association_with_transcript=16bp_to_uc008rxa.1,uc012dah.1_5end
|EntrezGene=18619
|EntrezGene=18619
|HGNC=
|HGNC=
|MCL_coexpression_id=90
|TSSclassifier=NA
|UniProt=Q3UXY8
|UniProt=Q3UXY8
|association_with_transcript=16bp_to_uc008rxa.1,uc012dah.1_5end
|cluster_id=chr4:4065921..4065945,-
|description=CAGE_peak_1_at_Penk_5end
|id=chr4:4065921..4065945,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.89e-09!71;UBERON:0003075!4.89e-09!71;UBERON:0007284!4.89e-09!71;UBERON:0000489!2.50e-08!21;UBERON:0004121!1.48e-07!102;UBERON:0000924!1.48e-07!102;UBERON:0006601!1.48e-07!102;UBERON:0000468!1.51e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.29e-08,21;UBERON:0010371,2.77e-07,73;UBERON:0002346,3.59e-07,64;UBERON:0003075,3.59e-07,64;UBERON:0007284,3.59e-07,64
|phase1_expression=1.28119077683835,0.697950815278722,0,0,0,0,0.233612640595526,27.6323912164973,3.23814060948833,1.40438715793196,2.73948749160808,0.159544317990673,0.684802919724823,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.946386496074713,0.411343300817216,0,68.5448918617622,0,0,0.47997726838022,0.22940928106717,0,0.86152399231815,1.07735616342945,0,1.00812051903972,0.886922042621219,0,0,0,0,0,0,2.09265815368454,2.3440060335714,2.61761871986899,7.05877785637217,4.09827290975067,9.71020706062307,23.1650145075062,25.0401020112201,1.65192076945513,12.5182615095686,0.436050312760893,1.97717564461025,1.1665793944457,6.15940255151595,2.87505128729943,0,7.97898356212479,0,0,0,1.03134418455488,14.1621522601718,23.2756030879694,31.0577387718028,15.2480039431109,39.1289710288901,7.19919773825119,4.94433181283487,7.104801149461,1.49800055259202,1.15265491596466,0.622137673850866,1.35005938331691,0.420649922702764,115.117346714733,124.348988555758,6.36952155917761,6.22995561618536,14.7075005857603,49.5521464497249,34.6032686210859,73.4239228964844,5.01167893374737,5.85520919055422,2.6045668527838,120.048689570594,109.175946346146,92.4429399049701,61.2827457785229,89.6941589034349,38.7710847316625,5.6794644999888,3.09843396437821,0.579728977403356,1.72084775396277,0,0.539703191637817,0,0,29.0719949672726,0,0,0,14.2251853974447,0,0,0,0,0,0,12.4460428893775,18.125651855302,59.8221820431244,30.8803881643722,151.928273677758,121.534367053943,91.3379201748893,109.122320221934,15.8339905075391,3.21353458054686,35.4268424453784,6.19227386364912,67.7803101279644,21.2007857721978,13.091631834651,16.775258509631,101.887717360018,84.1975761390089,5.8755122697976,0.11981512450592,0,0,98.861822007183,2894.60631403345,155.3087792115,223.538075767268,241.906822634493,273.656854684941,736.250851801484,556.653962805829,99.8987973999047,137.986626104786,75.7590681191306,33.3108333984522,48.0495398265958,64.462242470315,49.732589885786,36.1273810493551,26.5195400989639,28.8601311643965,75.0239775143145,3.66465587985832,13.4265316919152,29.0319354870516,80.2256380684924,101.209198718118,153.230953269753,179.442022947727,32.0445169577774,0.702213187313235,0.51469581422943,0.284163499395593,4.97101854085205,8.20841209933837,3.42117916775928,7.81257627431194,7.28027657465394,7.86762275725629,2.09280550275367,7.77992864058896,4.2035523252181,3.62031669809657,1.47750717671186,3.08061476274252,2.77779976108131,5.26920276698522,4.16039898157152,25.6553737248235,4.01327988279209,2.64335026387038,7.66906643324278,13.4371597837197,12.5407802804637,12.2424088255989,20.1683524623343,27.3524993929191,40.13760710975,4.74529061544512,48.0920947794112,27.6468729680296,30.8382531663784,23.2007263671753,4.49409704327111,7.13255564586491,12.7450414882795,137.698896091937,132.642523139895,234.432090200007,241.937777480233,249.034993523231,248.561345691289,173.710767480335,13.727743762103,13.3448918665169,16.2884256376777,0.296452627087149,1.16791574001266,4.52085688760367,0.674586337154561,1.21716072833102,0.964708639009667,1.2731292589071,3.16465751195892,1.45921704097532,0.549122826376163,0,1.48856379067401,0.936113019343682,0,0.179397413521912,0,4.80358294433172,14.2118558827864,7.49638891633319,6.45031325945715,5.63256595892405,16.0806007144143,50.4652518678349,31.02625000939,6.46304090835383,4.87222317227305,7.01600982092943,3.11340297959902,1.72684981865896,2.31438493730419,0,3.26343410291226,2.45882136509518,8.82997588175144,244.036896781444,199.845925639706,0,21.7124997395761,12.304820557234,13.2749173060857,17.8801420118223,5.73525115086125,8.24355094104858,5.37845408498782,9.31064613852257,13.7360253218317,13.4397844501818,203.717714611426,78.7767472905891,166.669405032551,169.076663809012,175.69318096575,79.6470830039777,15.2951800777638,16.9301191900261,28.8565772026524,72.9395675415509,79.3182681695333,81.9217689343261,78.1597518376637,69.1604914066359,53.0941753332171,23.1920938864997,48.4737053266478,26.2138496430417,152.871868832582,135.179824552978,75.4466363311205,98.0691492041773,161.95888638268,109.918745762217,77.3340970751082,38.9555035385759,1.48282449604674,75.8617689309069,31.9879330706471,301.29262021456,81.9652649773638,35.9310755449441,26.5908257586999,8.74442509889552,297.051333820837,1.36696704638282,14.4470807574256,20.1862034832986,0.188368457004691,0.546776910884101,0.915112692826091,0.169978429993855,0.279902904647316,1.24379976423981,46.7788602827406,57.2568148381855,40.8672128924966,23.6531696399745,32.4086858822427,45.4194132592049,25.2196327739615,28.8460560481422,18.5846718808661,10.4988128366352,14.2908042009993,1.69107881605257,1.49516546043979,4.63283773279873,34.8067627135845,52.0514088615256,48.6593641413441,87.9005717456697,84.1120326091918,34.7084430049103,16.6693043369944,23.9064905194028,8.53230025696081,40.747768273323,35.3325692647006,23.1259064900475,21.4832034800978,18.4773659946576,10.6973950072772,12.5536098098391,6.5628192466296,7.08723301891499,5.64626636766307,5.16526767920688,3.94468550725351,4.20756847853648,32.8759056242057,0,0.897138566094757,11.7519231454855,49.6497256662729,1202.10625526482,35.897718356384,9.4322086794789,40.6273404268644,19.2015626489803,24.8575627713876,25.2074025913335,18.9038500578056,22.6077231524312,31.7265436903674,24.9758325085768,26.1186297870048,37.610819945689,30.0300980816056,4.15149390336707,48.6810345549258,52.9274177837816,82.4131770861517,18.2363451486345,30.7018659111524,69.340979074104,67.3734637171184,77.3415295116275,74.0402830467927,78.8320622658646,62.0580663160191,61.5224704077127,60.3116935653869,56.3441950454566,72.3966410750272,60.4916181432146,60.187676784676,57.6920261124629,62.4123421369845,57.6020344007498,57.857112807944,54.8403236878838,64.3884625681215,59.2889096616583,59.2302255241735,67.1345660443075,58.1384062277633,59.3463977506416,77.9987757604256,66.3169751314133,54.8669966831888,64.6585048208109,62.1296733155724,96.0674922686084,122.407183189594,129.832042687202,99.2704269703138,139.449194078187,74.3393082432767,58.6625624119666
|phase1_expression=1.28119077683835,0.697950815278722,0,0,0,0,0.233612640595526,27.6323912164973,3.23814060948833,1.40438715793196,2.73948749160808,0.159544317990673,0.684802919724823,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.946386496074713,0.411343300817216,0,68.5448918617622,0,0,0.47997726838022,0.22940928106717,0,0.86152399231815,1.07735616342945,0,1.00812051903972,0.886922042621219,0,0,0,0,0,0,2.09265815368454,2.3440060335714,2.61761871986899,7.05877785637217,4.09827290975067,9.71020706062307,23.1650145075062,25.0401020112201,1.65192076945513,12.5182615095686,0.436050312760893,1.97717564461025,1.1665793944457,6.15940255151595,2.87505128729943,0,7.97898356212479,0,0,0,1.03134418455488,14.1621522601718,23.2756030879694,31.0577387718028,15.2480039431109,39.1289710288901,7.19919773825119,4.94433181283487,7.104801149461,1.49800055259202,1.15265491596466,0.622137673850866,1.35005938331691,0.420649922702764,115.117346714733,124.348988555758,6.36952155917761,6.22995561618536,14.7075005857603,49.5521464497249,34.6032686210859,73.4239228964844,5.01167893374737,5.85520919055422,2.6045668527838,120.048689570594,109.175946346146,92.4429399049701,61.2827457785229,89.6941589034349,38.7710847316625,5.6794644999888,3.09843396437821,0.579728977403356,1.72084775396277,0,0.539703191637817,0,0,29.0719949672726,0,0,0,14.2251853974447,0,0,0,0,0,0,12.4460428893775,18.125651855302,59.8221820431244,30.8803881643722,151.928273677758,121.534367053943,91.3379201748893,109.122320221934,15.8339905075391,3.21353458054686,35.4268424453784,6.19227386364912,67.7803101279644,21.2007857721978,13.091631834651,16.775258509631,101.887717360018,84.1975761390089,5.8755122697976,0.11981512450592,0,0,98.861822007183,2894.60631403345,155.3087792115,223.538075767268,241.906822634493,273.656854684941,736.250851801484,556.653962805829,99.8987973999047,137.986626104786,75.7590681191306,33.3108333984522,48.0495398265958,64.462242470315,49.732589885786,36.1273810493551,26.5195400989639,28.8601311643965,75.0239775143145,3.66465587985832,13.4265316919152,29.0319354870516,80.2256380684924,101.209198718118,153.230953269753,179.442022947727,32.0445169577774,0.702213187313235,0.51469581422943,0.284163499395593,4.97101854085205,8.20841209933837,3.42117916775928,7.81257627431194,7.28027657465394,7.86762275725629,2.09280550275367,7.77992864058896,4.2035523252181,3.62031669809657,1.47750717671186,3.08061476274252,2.77779976108131,5.26920276698522,4.16039898157152,25.6553737248235,4.01327988279209,2.64335026387038,7.66906643324278,13.4371597837197,12.5407802804637,12.2424088255989,20.1683524623343,27.3524993929191,40.13760710975,4.74529061544512,48.0920947794112,27.6468729680296,30.8382531663784,23.2007263671753,4.49409704327111,7.13255564586491,12.7450414882795,137.698896091937,132.642523139895,234.432090200007,241.937777480233,249.034993523231,248.561345691289,173.710767480335,13.727743762103,13.3448918665169,16.2884256376777,0.296452627087149,1.16791574001266,4.52085688760367,0.674586337154561,1.21716072833102,0.964708639009667,1.2731292589071,3.16465751195892,1.45921704097532,0.549122826376163,0,1.48856379067401,0.936113019343682,0,0.179397413521912,0,4.80358294433172,14.2118558827864,7.49638891633319,6.45031325945715,5.63256595892405,16.0806007144143,50.4652518678349,31.02625000939,6.46304090835383,4.87222317227305,7.01600982092943,3.11340297959902,1.72684981865896,2.31438493730419,0,3.26343410291226,2.45882136509518,8.82997588175144,244.036896781444,199.845925639706,0,21.7124997395761,12.304820557234,13.2749173060857,17.8801420118223,5.73525115086125,8.24355094104858,5.37845408498782,9.31064613852257,13.7360253218317,13.4397844501818,203.717714611426,78.7767472905891,166.669405032551,169.076663809012,175.69318096575,79.6470830039777,15.2951800777638,16.9301191900261,28.8565772026524,72.9395675415509,79.3182681695333,81.9217689343261,78.1597518376637,69.1604914066359,53.0941753332171,23.1920938864997,48.4737053266478,26.2138496430417,152.871868832582,135.179824552978,75.4466363311205,98.0691492041773,161.95888638268,109.918745762217,77.3340970751082,38.9555035385759,1.48282449604674,75.8617689309069,31.9879330706471,301.29262021456,81.9652649773638,35.9310755449441,26.5908257586999,8.74442509889552,297.051333820837,1.36696704638282,14.4470807574256,20.1862034832986,0.188368457004691,0.546776910884101,0.915112692826091,0.169978429993855,0.279902904647316,1.24379976423981,46.7788602827406,57.2568148381855,40.8672128924966,23.6531696399745,32.4086858822427,45.4194132592049,25.2196327739615,28.8460560481422,18.5846718808661,10.4988128366352,14.2908042009993,1.69107881605257,1.49516546043979,4.63283773279873,34.8067627135845,52.0514088615256,48.6593641413441,87.9005717456697,84.1120326091918,34.7084430049103,16.6693043369944,23.9064905194028,8.53230025696081,40.747768273323,35.3325692647006,23.1259064900475,21.4832034800978,18.4773659946576,10.6973950072772,12.5536098098391,6.5628192466296,7.08723301891499,5.64626636766307,5.16526767920688,3.94468550725351,4.20756847853648,32.8759056242057,0,0.897138566094757,11.7519231454855,49.6497256662729,1202.10625526482,35.897718356384,9.4322086794789,40.6273404268644,19.2015626489803,24.8575627713876,25.2074025913335,18.9038500578056,22.6077231524312,31.7265436903674,24.9758325085768,26.1186297870048,37.610819945689,30.0300980816056,4.15149390336707,48.6810345549258,52.9274177837816,82.4131770861517,18.2363451486345,30.7018659111524,69.340979074104,67.3734637171184,77.3415295116275,74.0402830467927,78.8320622658646,62.0580663160191,61.5224704077127,60.3116935653869,56.3441950454566,72.3966410750272,60.4916181432146,60.187676784676,57.6920261124629,62.4123421369845,57.6020344007498,57.857112807944,54.8403236878838,64.3884625681215,59.2889096616583,59.2302255241735,67.1345660443075,58.1384062277633,59.3463977506416,77.9987757604256,66.3169751314133,54.8669966831888,64.6585048208109,62.1296733155724,96.0674922686084,122.407183189594,129.832042687202,99.2704269703138,139.449194078187,74.3393082432767,58.6625624119666
|short_description=p1@Penk
}}
}}

Latest revision as of 22:58, 26 September 2015

Short description:p1@Penk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Penk_5end
Coexpression cluster:MCL_coexpression_mm9:90
Association with transcript: 16bp_to_uc008rxa.1, uc012dah.1_5end
EntrezGene:Penk
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Penk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A368.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D925.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C314.16
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C731.06
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.25
Mouse Meningeal cells, donor3.CNhs12109.11639-122D139.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1115.12
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5124.35
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D349.55
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D773.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4120.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5109.18
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I692.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D661.28
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F689.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E138.77
Mouse Schwann, donor1.CNhs12507.11728-123D95.68
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A729.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.45
accessory axillary lymph node, adult.CNhs10475.1063-29H918.13
adrenal gland, adult.CNhs10508.49-24D759.82
adrenal gland, embryo E14.CNhs11038.406-44C530.88
adrenal gland, embryo E16.CNhs11004.1254-43D6151.93
adrenal gland, embryo E17.CNhs11043.1263-45I1121.53
adrenal gland, embryo E18.CNhs11026.1262-18F591.34
adrenal gland, neonate N00.CNhs11191.1311-23C1109.12
adrenal gland, neonate N25.CNhs11223.1377-27I315.83
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H135.43
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F567.78
bone (os femoris), neonate N16.CNhs11225.1525-43A621.20
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B2101.89
cerebellum, neonate N30.CNhs11135.1395-42I284.20
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A498.86
corpus striatum, adult.CNhs10487.19-21D82894.61
corpus striatum, neonate N00.CNhs11226.630-43F1155.31
cortex, adult.CNhs10473.12-14D5223.54
cortex, neonate N30.CNhs11107.1392-42F2241.91
diencephalon, adult.CNhs10482.20-12F2273.66
diencephalon, neonate N30.CNhs11201.1388-42B2736.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1556.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A299.90
epididymis, adult.CNhs10490.58-23B2137.99
eyeball, adult.CNhs10484.31-12G475.76
eyeball, embryo E12.CNhs11016.345-16C633.31
eyeball, embryo E14.CNhs10521.399-16E248.05
eyeball, embryo E15.CNhs10593.426-16C964.46
eyeball, embryo E17.CNhs11023.1261-18D449.73
eyeball, neonate N00.CNhs11207.633-15C636.13
eyeball, neonate N01.CNhs11140.1532-43E726.52
eyeball, neonate N02.CNhs11205.1551-44G828.86
eyeball, neonate N16.CNhs11188.777-19A275.02
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H213.43
forelimb, embryo E13.CNhs10589.384-1E229.03
forelimb, embryo E14.CNhs10577.413-26A880.23
forelimb, embryo E15.CNhs11007.437-20E7101.21
forelimb, embryo E17.CNhs10598.1517-43C4153.23
forelimb, embryo E18.CNhs11008.1520-43B5179.44
gonad, embryo E13.CNhs11044.1564-45I632.04
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F58.21
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C67.87
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E34.20
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D35.27
heart, neonate N30.CNhs11202.1390-42D24.16
hippocampus, adult.CNhs10478.13-16E825.66
hippocampus, neonate N00.CNhs11228.627-43G14.01
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A37.67
intestine, embryo E12.CNhs11019.1251-16I513.44
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D812.24
intestine, embryo E16.CNhs10585.463-22H420.17
intestine, embryo E17.CNhs10582.482-18D327.35
intestine, embryo E18.CNhs10526.1289-20F740.14
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E948.09
intestine, neonate N06.CNhs11102.688-20B827.65
intestine, neonate N07.CNhs11095.720-20F230.84
intestine, neonate N10.CNhs11098.755-23A523.20
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E37.13
intestine, neonate N30.CNhs11131.1384-42G112.75
kidney, embryo E14.CNhs10606.411-4I9137.70
kidney, embryo E15.CNhs10997.434-16F8132.64
kidney, embryo E16.CNhs10584.464-22A5234.43
kidney, embryo E17.CNhs11028.483-18I2241.94
kidney, embryo E18.CNhs11001.1288-20C7249.03
kidney, neonate N00.CNhs11214.646-21G7248.56
kidney, neonate N10.CNhs11206.758-6D5173.71
kidney, neonate N20.CNhs11113.832-19I113.73
kidney, neonate N25.CNhs11122.1353-25F313.34
kidney, neonate N30.CNhs11203.1385-42H116.29
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G214.21
lung, embryo E14.CNhs10604.404-26F87.50
lung, embryo E15.CNhs11020.432-17C56.45
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A616.08
lung, embryo E18.CNhs10583.1287-20I650.47
lung, neonate N00.CNhs11224.640-42C631.03
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E67.02
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H28.83
medulla oblongata, adult.CNhs10477.17-12C2244.04
medulla oblongata, neonate N30.CNhs11200.1396-42A3199.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.71
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.74
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I9203.72
ovary, adult.CNhs10507.91-2I778.78
ovary, embryo E18.CNhs11040.505-44H7166.67
ovary, neonate N00.CNhs11217.1299-22I4169.08
oviduct, adult pregnant day01.CNhs10500.988-6G6175.69
pancreas, adult.CNhs10486.34-16E479.65
pancreas, embryo E14.CNhs11012.405-44F415.30
pancreas, embryo E15.CNhs11042.1556-45F216.93
pancreas, embryo E16.CNhs11003.460-26E528.86
pancreas, embryo E17.CNhs10599.1558-45G372.94
pancreas, embryo E18.CNhs10580.1535-43I779.32
pancreas, neonate N00.CNhs11105.645-26G981.92
pancreas, neonate N01.CNhs11138.1531-43D778.16
pancreas, neonate N02.CNhs11139.1539-43D869.16
pancreas, neonate N16.CNhs11136.787-43B653.09
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H548.47
pituitary gland, adult.CNhs10493.21-1G826.21
pituitary gland, embryo E12.CNhs11018.346-16E6152.87
pituitary gland, embryo E13.CNhs11009.370-44C7135.18
pituitary gland, embryo E14.CNhs11037.398-44A575.45
pituitary gland, embryo E15.CNhs10592.427-16B998.07
pituitary gland, embryo E16.CNhs11036.449-43F6161.96
pituitary gland, embryo E17.CNhs11039.1265-44F5109.92
pituitary gland, neonate N00.CNhs11190.1308-22E977.33
placenta, adult pregnant day10.CNhs10472.539-13I738.96
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F875.86
skin, adult.CNhs10492.30-1C331.99
skin, neonate N00.CNhs11124.650-25G4301.29
skin, neonate N03.CNhs11215.662-22H381.97
skin, neonate N06.CNhs11097.693-20I535.93
skin, neonate N10.CNhs11108.762-6C426.59
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C9297.05
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C114.45
spleen, embryo E18.CNhs11011.1271-21F220.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H646.78
stomach, embryo E12.CNhs10588.356-43E357.26
stomach, embryo E15.CNhs10603.1252-16G840.87
stomach, embryo E16.CNhs11022.459-17D423.65
stomach, embryo E17.CNhs11006.1035-18D532.41
stomach, embryo E18.CNhs10999.1286-20C645.42
stomach, neonate N03.CNhs11193.1340-24B825.22
stomach, neonate N07.CNhs11210.718-18A928.85
stomach, neonate N25.CNhs11104.1355-25E418.58
stomach, neonate N30.CNhs11134.1386-42I110.50
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G534.81
testis, embryo E17.CNhs11029.486-18I552.05
testis, embryo E18.CNhs11027.503-18G548.66
testis, neonate N00.CNhs11189.1300-22B787.90
testis, neonate N07.CNhs11222.726-26I484.11
testis, neonate N10.CNhs11204.763-44D934.71
testis, neonate N20.CNhs11110.839-18H316.67
testis, neonate N30.CNhs11130.1391-42E223.91
thymus, adult.CNhs10471.38-12B58.53
thymus, embryo E14.CNhs11041.402-44I440.75
thymus, embryo E15.CNhs11005.430-45I235.33
thymus, embryo E16.CNhs11002.456-26C523.13
thymus, embryo E17.CNhs10581.478-18C121.48
thymus, embryo E18.CNhs10595.1273-19G418.48
thymus, neonate N02.CNhs11181.1541-43F810.70
thymus, neonate N03.CNhs11137.2104-43C712.55
thymus, neonate N06.CNhs11197.681-26C46.56
thymus, neonate N07.CNhs11211.713-19D37.09
thymus, neonate N10.CNhs11194.748-24E45.65
thymus, neonate N20.CNhs11186.820-7A25.17
thymus, neonate N25.CNhs11125.1362-25G73.94
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B432.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.75
urinary bladder, adult.CNhs10481.879-12E449.65
uterus, adult pregnant day19.CNhs10497.590-15F51202.11
uterus, adult.CNhs10509.92-27E535.90
vagina, adult.CNhs10502.89-27D59.43
vesicular gland, adult.CNhs10491.51-27F840.63
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A726.12
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A837.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.03
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C948.68
whole body, embryo E13.CNhs10512.372-23H252.93
whole body, embryo E14.5.CNhs10578.420-27D282.41
whole body, embryo E14.CNhs10519.395-14B118.24
whole body, embryo E16.CNhs10514.453-14F230.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G569.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G567.37
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G577.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G574.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G578.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G562.06
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G561.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G560.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G556.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G572.40
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G560.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G560.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G557.69
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G562.41
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G557.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G557.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G554.84
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G564.39
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G559.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G559.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G567.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G558.14
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G559.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G578.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G566.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G554.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G564.66
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G562.13
whole body, embryo E17.5.CNhs10513.490-9F996.07
whole body, embryo E17.CNhs10517.475-3I5122.41
whole body, embryo E18.CNhs10516.493-3B3129.83
whole body, neonate N00.CNhs10525.657-19C299.27
whole body, neonate N01.CNhs10576.659-23C6139.45
whole body, neonate N06.CNhs10515.692-21D174.34
whole body, neonate N10.CNhs10518.761-6B458.66





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cavitated compound organ2.29e-0821
ecto-epithelium2.77e-0773
neurectoderm3.59e-0764
neural plate3.59e-0764
presumptive neural plate3.59e-0764
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:4065921..4065945,-&oldid=4278884"