FFCP PHASE2:Mm9::chr5:15440374..15440442,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:12293 |HGNC= |MCL_coexpression_id=1167 |TSSclassifier=NA |UniProt=uniprot:O08532,uniprot:E9Q1X8,uniprot:Q14BH8,unip...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=12293 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1167 | |MCL_coexpression_id=1167 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=O08532,E9Q1X8,Q14BH8,Q8C6Y3 | ||
|association_with_transcript=-66bp_to_ENSMUST00000039370,ENSMUST00000078272,ENSMUST00000101581,ENSMUST00000167946,NM_001110843,NM_001110844,NM_001110845,NM_001110846,NM_009784,uc008wmw.2,uc008wmx.2,uc008wmy.2,uc008wmz.2,uc008wna.2,uc008wnb.2_5end | |association_with_transcript=-66bp_to_ENSMUST00000039370,ENSMUST00000078272,ENSMUST00000101581,ENSMUST00000167946,NM_001110843,NM_001110844,NM_001110845,NM_001110846,NM_009784,uc008wmw.2,uc008wmx.2,uc008wmy.2,uc008wmz.2,uc008wna.2,uc008wnb.2_5end | ||
|cluster_id=chr5:15440374..15440442,+ | |cluster_id=chr5:15440374..15440442,+ | ||
Latest revision as of 19:19, 25 September 2015
| Short description: | p2@Cacna2d1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Cacna2d1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1167 |
| Association with transcript: | -66bp_to_ENSMUST00000039370, ENSMUST00000078272, ENSMUST00000101581, ENSMUST00000167946, NM_001110843, NM_001110844, NM_001110845, NM_001110846, NM_009784, uc008wmw.2, uc008wmx.2, uc008wmy.2, uc008wmz.2, uc008wna.2, uc008wnb.2_5end |
| EntrezGene: | Cacna2d1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| structure with developmental contribution from neural crest | 8.70e-13 | 92 |
| primary circulatory organ | 5.05e-09 | 18 |
| heart | 5.05e-09 | 18 |
| primitive heart tube | 5.05e-09 | 18 |
| primary heart field | 5.05e-09 | 18 |
| anterior lateral plate mesoderm | 5.05e-09 | 18 |
| heart tube | 5.05e-09 | 18 |
| heart primordium | 5.05e-09 | 18 |
| cardiac mesoderm | 5.05e-09 | 18 |
| cardiogenic plate | 5.05e-09 | 18 |
| heart rudiment | 5.05e-09 | 18 |
| cardiovascular system | 4.32e-08 | 23 |
| circulatory system | 4.32e-08 | 23 |
| occipital lobe | 7.99e-08 | 10 |
| visual cortex | 7.99e-08 | 10 |
| neocortex | 7.99e-08 | 10 |
| anatomical conduit | 1.67e-07 | 122 |
| tube | 9.18e-07 | 114 |
