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FFCP PHASE1:Mm9::chr4:154010409..154010466,-: Difference between revisions

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(Created page with "{{FFCP |id=chr4:154010409..154010466,- |short_description=p2@Prdm16 |description=CAGE_peak_2_at_Prdm16_5end |association_with_transcript=8bp_to_uc008wby.1_5end |EntrezGen...")
 
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{{FFCP
{{FFCP
|id=chr4:154010409..154010466,-
|DHSsupport=NA
|short_description=p2@Prdm16
|DPIdataset=NA
|description=CAGE_peak_2_at_Prdm16_5end
|association_with_transcript=8bp_to_uc008wby.1_5end
|EntrezGene=70673
|EntrezGene=70673
|HGNC=
|HGNC=
|MCL_coexpression_id=3471
|TSSclassifier=NA
|UniProt=Q3UR05
|UniProt=Q3UR05
|association_with_transcript=8bp_to_uc008wby.1_5end
|cluster_id=chr4:154010409..154010466,-
|description=CAGE_peak_2_at_Prdm16_5end
|id=chr4:154010409..154010466,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.43e-09!63;UBERON:0000956!1.32e-08!21;UBERON:0001869!1.32e-08!21;UBERON:0000203!1.32e-08!21;UBERON:0000955!8.93e-08!50;UBERON:0006238!8.93e-08!50;UBERON:0003056!1.02e-07!49;UBERON:0001049!1.68e-07!52;UBERON:0005068!1.68e-07!52;UBERON:0006241!1.68e-07!52;UBERON:0007135!1.68e-07!52;UBERON:0002020!1.80e-07!34;UBERON:0000073!2.22e-07!75;UBERON:0001016!2.22e-07!75;UBERON:0004121!2.50e-07!102;UBERON:0000924!2.50e-07!102;UBERON:0006601!2.50e-07!102;UBERON:0002616!2.52e-07!49;UBERON:0002619!2.99e-07!17;UBERON:0000468!3.03e-07!333;UBERON:0002346!3.64e-07!71;UBERON:0003075!3.64e-07!71;UBERON:0007284!3.64e-07!71;UBERON:0001017!6.29e-07!73;UBERON:0005743!6.29e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.31e-09,21;UBERON:0001869,3.31e-09,21;UBERON:0000203,3.31e-09,21;UBERON:0000073,3.57e-08,54;UBERON:0003056,5.80e-08,49;UBERON:0002020,8.10e-08,34;UBERON:0002619,9.74e-08,17;UBERON:0002346,1.90e-07,64;UBERON:0003075,1.90e-07,64;UBERON:0007284,1.90e-07,64;UBERON:0000955,1.93e-07,47;UBERON:0006238,1.93e-07,47;UBERON:0001049,2.16e-07,52;UBERON:0005068,2.16e-07,52;UBERON:0006241,2.16e-07,52;UBERON:0007135,2.16e-07,52;UBERON:0003528,5.50e-07,29;UBERON:0002791,5.50e-07,29;UBERON:0001893,5.50e-07,29;UBERON:0001016,5.63e-07,75;UBERON:0002616,5.73e-07,46;UBERON:0003080,9.83e-07,40
|phase1_expression=14.8938427807458,0,0,0,0,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0.47997726838022,1.14704640533585,0,0,0,0,0,0,0,0,0,2.02196133825892,1.99481574430191,2.6542016314108,0,0,0,0,0,0,0,0,0,0.782391344348039,66.0616223832753,29.8773208518882,43.1634375944909,18.6181940761732,12.9377307928474,0,0,0,0,0.286533439938757,0.515672092277442,0.404632921719196,1.05798195854407,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0.7104801149461,14.081205194365,30.3532461204028,2.90330914463737,4.72520784160917,3.78584930432488,2.28520787523043,4.63823935998388,3.55223317723367,3.06705507258356,2.75765635983006,3.30347642998166,2.17068474744819,1.99688493233117,0.527545150920775,0.274462930807229,0,1.11673199600552,1.12552522006336,2.59757021220577,2.65165726926301,4.27115042397309,1.4911955666024,2.34751199332871,7.02815508993105,0.869593466105033,0,0,0,0,0,1.26399978118577,0.340860645156116,0.259786004602869,0,48.4501364031781,0,0,0,0,0.253359865475099,0.505524445014783,1.94112595522402,0.258937883647172,0.742210695324124,0.867426633830679,2.13125834818499,3.45923245884088,1.95939432718409,1.05829836422134,2.01066546127481,0,44.8258006451726,0,0.970601099684455,0.220841518460394,0,0,1.75668478206928,2.51336048176146,1.27728527604296,0,0,0.127070227073065,2.69623150928681,9.15001205637253,1.50785222535437,12.5153510538439,8.18289463457058,4.36354893575076,6.16516799657479,0.407357455401265,1.36847667671102,1.0108910337347,1.68353484709179,3.513251959993,2.29902104433473,1.62055916824814,1.80845781402858,3.33378845841506,2.3060469651273,3.09215691047105,4.9153640440413,29.3172470388665,27.7985937846694,21.6419882721657,10.0830036916684,6.11703948296315,1.74126083261083,2.05782136407943,0,0,0,0,1.03562886267751,2.57978665979206,1.44049649168812,3.55117103377815,1.77087808572663,1.07986979021165,2.32533944750408,1.07309360559848,1.28441876603886,1.48103864922132,1.47750717671186,1.37816976227955,1.31579988682799,0.878200461164203,1.07365135008297,11.565947171027,3.19004298375782,0,1.32225283331772,0.853153002140936,0.464473343720877,0.38660238396628,0.605050573870028,1.33426826306922,0.951128130562796,0.474529061544512,1.4822905925161,2.5133520880027,3.18330355265841,2.33956904542944,1.79763881730844,0.648414149624083,1.39398891278057,6.2590407314517,5.59817711787671,11.270773567308,10.386217720111,11.2492442557223,8.6968416663995,16.1253169666856,18.8940989413891,21.1948282585856,18.0159859325829,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0,0,0.575392274901621,0.324270453550071,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0,0,3.51031061316549,2.08440552947533,1.30371981153621,1.86719594352707,2.81628297946203,4.35516269348721,4.52282917683426,3.51240566144038,2.52216230569906,1.55025282754142,2.87018583583477,2.29408640602033,2.93564469172023,2.16973587872267,0,0,0.491764273019036,1.10374698521893,2.56880943980467,1.28932855251423,0,0.757412781613119,0,0,0,0.238968797952552,0.891194696329576,0.566153061577665,0.404810701674894,0.584511715822624,1.18586333383957,11.8888887076069,0.709700426041343,0.534196811001766,0.488660878060728,0,1.32745138339963,8.49732226542435,8.46505959501303,6.03536255218874,9.44966057218473,7.37844355065426,4.9101375701962,10.5424781548477,7.48644494607915,4.10847785316561,7.37930260024991,8.25084345985495,0,1.98067203434441,1.29358683782755,1.92903331528433,0.886701168211368,1.24858172321449,3.62007845324666,1.2178597964584,0,0,2.42581237860458,0.16488625294148,0.645857706783622,0.844380948994182,0.596861720015682,0.492422699235184,2.62332752966866,0.370850604021019,0,2.68302928352189,2.22233432843654,0.376736914009382,0,0.228778173206523,1.01987057996313,1.11961161858926,1.24379976423981,3.81868247206045,1.10717597753397,2.23651413839534,2.05210147561422,2.50905955217362,4.80397640241591,3.9110660451598,6.28166263512553,7.59092231753686,0.129614973291793,1.24267862617385,0,0.448549638131936,0.165458490457098,0.388902376688095,0.516639293910924,0.506868376472335,0.117357238645754,0.781226309063701,0.524296722128554,0,0,0,1.41907650703115,0.924398614483445,0,0.716106782669926,0.596044064343795,0.480781798079875,0.590758108698309,0.403865799792591,0.304827226619999,0.302478555410522,0.194915761479505,0.0962118416403295,0,0.453460767230423,0,0,0,1.35232715822533,0,0,0,1.50471631210609,5.0827665835536,1.38097570952153,5.15605962095457,3.43706364687375,8.90607275701835,9.06472676867641,3.37511250115903,9.45674526770863,5.89085131679466,5.1776031175182,9.44464863016008,3.99024873401031,3.24393850932855,2.18796045361465,2.51535795153579,5.88299227040045,3.77819437262746,3.09052585858341,3.53011130550997,1.76888048234658,5.32306529769503,4.71565853465191,3.93294331373506,3.26528277264833,3.4461281373368,2.85776214769844,2.89710814862139,2.31491064556446,2.88460130562315,4.12156976376312,4.4573002810104,3.37204031702741,4.76872379894642,2.18019624948493,3.01150017329058,2.62305284464197,3.84148743032822,2.10455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|phase1_expression=14.8938427807458,0,0,0,0,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0.47997726838022,1.14704640533585,0,0,0,0,0,0,0,0,0,2.02196133825892,1.99481574430191,2.6542016314108,0,0,0,0,0,0,0,0,0,0.782391344348039,66.0616223832753,29.8773208518882,43.1634375944909,18.6181940761732,12.9377307928474,0,0,0,0,0.286533439938757,0.515672092277442,0.404632921719196,1.05798195854407,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0.7104801149461,14.081205194365,30.3532461204028,2.90330914463737,4.72520784160917,3.78584930432488,2.28520787523043,4.63823935998388,3.55223317723367,3.06705507258356,2.75765635983006,3.30347642998166,2.17068474744819,1.99688493233117,0.527545150920775,0.274462930807229,0,1.11673199600552,1.12552522006336,2.59757021220577,2.65165726926301,4.27115042397309,1.4911955666024,2.34751199332871,7.02815508993105,0.869593466105033,0,0,0,0,0,1.26399978118577,0.340860645156116,0.259786004602869,0,48.4501364031781,0,0,0,0,0.253359865475099,0.505524445014783,1.94112595522402,0.258937883647172,0.742210695324124,0.867426633830679,2.13125834818499,3.45923245884088,1.95939432718409,1.05829836422134,2.01066546127481,0,44.8258006451726,0,0.970601099684455,0.220841518460394,0,0,1.75668478206928,2.51336048176146,1.27728527604296,0,0,0.127070227073065,2.69623150928681,9.15001205637253,1.50785222535437,12.5153510538439,8.18289463457058,4.36354893575076,6.16516799657479,0.407357455401265,1.36847667671102,1.0108910337347,1.68353484709179,3.513251959993,2.29902104433473,1.62055916824814,1.80845781402858,3.33378845841506,2.3060469651273,3.09215691047105,4.9153640440413,29.3172470388665,27.7985937846694,21.6419882721657,10.0830036916684,6.11703948296315,1.74126083261083,2.05782136407943,0,0,0,0,1.03562886267751,2.57978665979206,1.44049649168812,3.55117103377815,1.77087808572663,1.07986979021165,2.32533944750408,1.07309360559848,1.28441876603886,1.48103864922132,1.47750717671186,1.37816976227955,1.31579988682799,0.878200461164203,1.07365135008297,11.565947171027,3.19004298375782,0,1.32225283331772,0.853153002140936,0.464473343720877,0.38660238396628,0.605050573870028,1.33426826306922,0.951128130562796,0.474529061544512,1.4822905925161,2.5133520880027,3.18330355265841,2.33956904542944,1.79763881730844,0.648414149624083,1.39398891278057,6.2590407314517,5.59817711787671,11.270773567308,10.386217720111,11.2492442557223,8.6968416663995,16.1253169666856,18.8940989413891,21.1948282585856,18.0159859325829,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0,0,0.575392274901621,0.324270453550071,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0,0,3.51031061316549,2.08440552947533,1.30371981153621,1.86719594352707,2.81628297946203,4.35516269348721,4.52282917683426,3.51240566144038,2.52216230569906,1.55025282754142,2.87018583583477,2.29408640602033,2.93564469172023,2.16973587872267,0,0,0.491764273019036,1.10374698521893,2.56880943980467,1.28932855251423,0,0.757412781613119,0,0,0,0.238968797952552,0.891194696329576,0.566153061577665,0.404810701674894,0.584511715822624,1.18586333383957,11.8888887076069,0.709700426041343,0.534196811001766,0.488660878060728,0,1.32745138339963,8.49732226542435,8.46505959501303,6.03536255218874,9.44966057218473,7.37844355065426,4.9101375701962,10.5424781548477,7.48644494607915,4.10847785316561,7.37930260024991,8.25084345985495,0,1.98067203434441,1.29358683782755,1.92903331528433,0.886701168211368,1.24858172321449,3.62007845324666,1.2178597964584,0,0,2.42581237860458,0.16488625294148,0.645857706783622,0.844380948994182,0.596861720015682,0.492422699235184,2.62332752966866,0.370850604021019,0,2.68302928352189,2.22233432843654,0.376736914009382,0,0.228778173206523,1.01987057996313,1.11961161858926,1.24379976423981,3.81868247206045,1.10717597753397,2.23651413839534,2.05210147561422,2.50905955217362,4.80397640241591,3.9110660451598,6.28166263512553,7.59092231753686,0.129614973291793,1.24267862617385,0,0.448549638131936,0.165458490457098,0.388902376688095,0.516639293910924,0.506868376472335,0.117357238645754,0.781226309063701,0.524296722128554,0,0,0,1.41907650703115,0.924398614483445,0,0.716106782669926,0.596044064343795,0.480781798079875,0.590758108698309,0.403865799792591,0.304827226619999,0.302478555410522,0.194915761479505,0.0962118416403295,0,0.453460767230423,0,0,0,1.35232715822533,0,0,0,1.50471631210609,5.0827665835536,1.38097570952153,5.15605962095457,3.43706364687375,8.90607275701835,9.06472676867641,3.37511250115903,9.45674526770863,5.89085131679466,5.1776031175182,9.44464863016008,3.99024873401031,3.24393850932855,2.18796045361465,2.51535795153579,5.88299227040045,3.77819437262746,3.09052585858341,3.53011130550997,1.76888048234658,5.32306529769503,4.71565853465191,3.93294331373506,3.26528277264833,3.4461281373368,2.85776214769844,2.89710814862139,2.31491064556446,2.88460130562315,4.12156976376312,4.4573002810104,3.37204031702741,4.76872379894642,2.18019624948493,3.01150017329058,2.62305284464197,3.84148743032822,2.10455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|short_description=p2@Prdm16
}}
}}

Latest revision as of 19:27, 26 September 2015

Short description:p2@Prdm16
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Prdm16_5end
Coexpression cluster:MCL_coexpression_mm9:3471
Association with transcript: 8bp_to_uc008wby.1_5end
EntrezGene:Prdm16
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Prdm16

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C266.06
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C343.16
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C814.08
Mouse Microglia, donor2.CNhs12634.11736-123E830.35
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F97.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G648.45
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H144.83
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D512.52
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C63.33
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E229.32
forelimb, embryo E12.CNhs10600.359-14H227.80
forelimb, embryo E13.CNhs10589.384-1E221.64
forelimb, embryo E14.CNhs10577.413-26A810.08
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F85.60
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I210.39
kidney, embryo E18.CNhs11001.1288-20C711.25
kidney, neonate N00.CNhs11214.646-21G78.70
kidney, neonate N10.CNhs11206.758-6D516.13
kidney, neonate N20.CNhs11113.832-19I118.89
kidney, neonate N25.CNhs11122.1353-25F321.19
kidney, neonate N30.CNhs11203.1385-42H118.02
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A64.36
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B83.91
stomach, neonate N07.CNhs11210.718-18A96.28
stomach, neonate N25.CNhs11104.1355-25E47.59
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I89.44
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cerebral cortex3.31e-0921
cerebral hemisphere3.31e-0921
pallium3.31e-0921
regional part of nervous system3.57e-0854
pre-chordal neural plate5.80e-0849
gray matter8.10e-0834
regional part of cerebral cortex9.74e-0817
neurectoderm1.90e-0764
neural plate1.90e-0764
presumptive neural plate1.90e-0764
brain1.93e-0747
future brain1.93e-0747
neural tube2.16e-0752
neural rod2.16e-0752
future spinal cord2.16e-0752
neural keel2.16e-0752
brain grey matter5.50e-0729
regional part of telencephalon5.50e-0729
telencephalon5.50e-0729
nervous system5.63e-0775
regional part of brain5.73e-0746
anterior neural tube9.83e-0740
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