FFCP PHASE1:Mm9::chr4:107552434..107552445,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:107552434..107552445,+
|short_description=p3@Magoh
|description=CAGE_peak_3_at_Magoh_5end
|association_with_transcript=16bp_to_NM_010760,uc008uaj.1_5end
|...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17149 | |EntrezGene=17149 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=659 | |||
|TSSclassifier=NA | |||
|UniProt=P61327 | |UniProt=P61327 | ||
|association_with_transcript=16bp_to_NM_010760,uc008uaj.1_5end | |||
|cluster_id=chr4:107552434..107552445,+ | |||
|description=CAGE_peak_3_at_Magoh_5end | |||
|id=chr4:107552434..107552445,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.62e-08!13;CL:0000051!2.62e-08!13;CL:0000838!6.94e-08!12;CL:0000084!2.11e-07!11;CL:0000827!2.11e-07!11;CL:0000988!6.21e-07!32;CL:0002032!6.21e-07!32;CL:0000037!6.21e-07!32;CL:0000566!6.21e-07!32;CL:0000837!6.21e-07!32;CL:0000738!8.81e-07!17;CL:0002087!8.81e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.04e-08,13;CL:0000051,2.04e-08,13;CL:0000838,5.50e-08,12;CL:0000084,1.70e-07,11;CL:0000827,1.70e-07,11;CL:0000988,2.01e-07,32;CL:0002032,2.01e-07,32;CL:0000037,2.01e-07,32;CL:0000837,2.01e-07,32;CL:0000738,7.27e-07,17;CL:0002087,7.27e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!7.28e-10!94;UBERON:0007811!1.26e-09!86;UBERON:0001049!1.94e-09!52;UBERON:0005068!1.94e-09!52;UBERON:0006241!1.94e-09!52;UBERON:0007135!1.94e-09!52;UBERON:0002616!2.94e-09!49;UBERON:0000955!3.54e-09!50;UBERON:0006238!3.54e-09!50;UBERON:0002020!7.12e-09!34;UBERON:0003080!9.30e-09!40;UBERON:0002791!9.37e-09!29;UBERON:0003528!9.37e-09!29;UBERON:0001893!9.37e-09!29;UBERON:0002780!1.14e-08!39;UBERON:0001890!1.14e-08!39;UBERON:0006240!1.14e-08!39;UBERON:0000064!1.10e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.30e-09,54;UBERON:0001049,3.26e-09,52;UBERON:0005068,3.26e-09,52;UBERON:0006241,3.26e-09,52;UBERON:0007135,3.26e-09,52;UBERON:0002616,6.34e-09,46;UBERON:0000955,7.70e-09,47;UBERON:0006238,7.70e-09,47;UBERON:0002020,1.07e-08,34;UBERON:0003528,1.48e-08,29;UBERON:0002791,1.48e-08,29;UBERON:0001893,1.48e-08,29;UBERON:0003080,1.70e-08,40;UBERON:0002780,2.10e-08,39;UBERON:0001890,2.10e-08,39;UBERON:0006240,2.10e-08,39 | |||
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| ||
|short_description=p3@Magoh | |||
}} | }} |
Latest revision as of 03:10, 26 September 2015
Short description: | p3@Magoh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Magoh_5end |
Coexpression cluster: | MCL_coexpression_mm9:659 |
Association with transcript: | 16bp_to_NM_010760, uc008uaj.1_5end |
EntrezGene: | Magoh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.04e-08 | 13 |
common lymphoid progenitor | 2.04e-08 | 13 |
lymphoid lineage restricted progenitor cell | 5.50e-08 | 12 |
T cell | 1.70e-07 | 11 |
pro-T cell | 1.70e-07 | 11 |
hematopoietic cell | 2.01e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.01e-07 | 32 |
hematopoietic stem cell | 2.01e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.01e-07 | 32 |
leukocyte | 7.27e-07 | 17 |
nongranular leukocyte | 7.27e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.30e-09 | 54 |
neural tube | 3.26e-09 | 52 |
neural rod | 3.26e-09 | 52 |
future spinal cord | 3.26e-09 | 52 |
neural keel | 3.26e-09 | 52 |
regional part of brain | 6.34e-09 | 46 |
brain | 7.70e-09 | 47 |
future brain | 7.70e-09 | 47 |
gray matter | 1.07e-08 | 34 |
brain grey matter | 1.48e-08 | 29 |
regional part of telencephalon | 1.48e-08 | 29 |
telencephalon | 1.48e-08 | 29 |
anterior neural tube | 1.70e-08 | 40 |
regional part of forebrain | 2.10e-08 | 39 |
forebrain | 2.10e-08 | 39 |
future forebrain | 2.10e-08 | 39 |