FFCP PHASE1:Mm9::chr3:96836360..96836371,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:96836360..96836371,+
|short_description=p2@Gja5
|description=CAGE_peak_2_at_Gja5_5end
|association_with_transcript=21bp_to_ENSMUST00000072600,ENSMUST000001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14613 | |EntrezGene=14613 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=45 | |||
|TSSclassifier=NA | |||
|UniProt=Q01231,Q6TPI9,Q8CAG8 | |UniProt=Q01231,Q6TPI9,Q8CAG8 | ||
|association_with_transcript=21bp_to_ENSMUST00000072600,ENSMUST00000132256,NM_008121,uc008qoo.1,uc008qop.1_5end | |||
|cluster_id=chr3:96836360..96836371,+ | |||
|description=CAGE_peak_2_at_Gja5_5end | |||
|id=chr3:96836360..96836371,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.50e-10!18;UBERON:0000948!4.50e-10!18;UBERON:0005498!4.50e-10!18;UBERON:0004140!4.50e-10!18;UBERON:0009881!4.50e-10!18;UBERON:0004141!4.50e-10!18;UBERON:0003084!4.50e-10!18;UBERON:0007005!4.50e-10!18;UBERON:0004139!4.50e-10!18;UBERON:0004291!4.50e-10!18;UBERON:0002048!7.35e-10!14;UBERON:0000117!7.35e-10!14;UBERON:0000171!7.35e-10!14;UBERON:0000170!7.35e-10!14;UBERON:0005597!7.35e-10!14;UBERON:0000118!7.35e-10!14;UBERON:0003103!1.23e-07!43;UBERON:0004535!1.27e-07!23;UBERON:0001009!1.27e-07!23;UBERON:0005153!2.62e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.43e-16,18;UBERON:0000948,4.43e-16,18;UBERON:0005498,4.43e-16,18;UBERON:0004140,4.43e-16,18;UBERON:0009881,4.43e-16,18;UBERON:0004141,4.43e-16,18;UBERON:0003084,4.43e-16,18;UBERON:0007005,4.43e-16,18;UBERON:0004139,4.43e-16,18;UBERON:0004291,4.43e-16,18;UBERON:0002048,1.49e-14,14;UBERON:0000117,1.49e-14,14;UBERON:0000171,1.49e-14,14;UBERON:0000170,1.49e-14,14;UBERON:0005597,1.49e-14,14;UBERON:0000118,1.49e-14,14;UBERON:0004535,1.31e-12,23;UBERON:0001009,1.31e-12,23;UBERON:0005153,4.04e-11,17;UBERON:0005178,4.04e-11,17;UBERON:0005181,4.04e-11,17;UBERON:0002224,4.04e-11,17;UBERON:0000915,4.04e-11,17;UBERON:0008947,4.04e-11,17;UBERON:0003258,4.04e-11,17;UBERON:0004872,7.49e-09,33;UBERON:0005157,9.42e-09,20;UBERON:0003103,1.18e-07,43 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0.65407546914134,0.659058548203415,0.58328969722285,0.139986421625363,2.87505128729943,0,0,0,0,0,3.6097046459421,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0.569486723196412,0,0,0,0.579728977403356,3.44169550792555,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.520455980298408,0,0.461230994512117,0.452167921657868,0,0,1.48316980640624,1.44599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0.255457055208591,0,0,0,0.299581278809645,0,0,0,0,0,0,0.407357455401265,0.248813941220186,0,0,0.780722657776222,1.14951052216736,0.720248519221397,0.452114453507145,0.272145996605311,0.12811372028485,0.374806898238915,0.517406741478031,0.215567992932842,1.51284864134255,1.75951124163949,4.3839146485515,1.39023624612799,2.78601733217733,1.23469281844766,1.39323986772945,0,0,0,20.7125772535502,19.465662978431,21.4273853138608,22.7274946161802,24.9890574319203,17.4321837562737,17.9051137457814,11.267482858784,14.5956677958962,14.3167069424728,7.38753588355929,4.86412857275134,4.5321996101853,6.80605357402257,7.51555945058082,0,0,0,0,0.853153002140936,0.464473343720877,1.15980715189884,0.80673409849337,1.55664630691409,0.951128130562796,0.474529061544512,1.64698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,1.08069024937347,0.398282546508734,0.758671603812327,0.571242563048644,2.25415471346161,1.4255592949172,0.969762435838129,0.841629838683823,2.40298841072178,1.32849133181642,1.41298855057237,1.35736880313981,0,1.00107063429656,0,0.674586337154561,0.608580364165509,0.72353147925725,0.763877555344259,0.575392274901621,0.162135226775035,0,0,0,0.624075346229121,0,0.179397413521912,0.482443521363367,3.32555742299888,2.84237117655727,1.95557971730431,2.37643120085263,3.52035372432753,6.03022526790537,8.09348379012447,6.82967767502296,4.88668946729192,4.87222317227305,5.42146213435456,4.26044618260919,5.69860440157455,4.48412081602686,0,0,0,0.275936746304732,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.890328018336276,0.162886959353576,0.989820737835213,0,1.21390318077491,0.906970670894253,1.13163047853539,1.18120757152309,1.53717573971964,1.03371317267288,1.45413491791002,0.712994756769443,0.316036757935816,0,0,0,0.900305470156551,1.29358683782755,1.71469628025274,0.354680467284547,1.24858172321449,0.658196082408484,1.2178597964584,1.40803024838226,0.21183207086382,0,0.49465875882444,1.45317984026315,0.904693873922338,0.477489376012546,0,0,0,0,0.619160603889667,1.66675074632741,0,0.136694227721025,0,0,0,0,0.954670618015114,1.10717597753397,0.609958401380546,0.648032044930808,0.418176592028937,1.31017538247707,0.539457385539283,0.578574190077352,0,1.8146096260851,0,0,1.64468200648377,0.992750942742586,1.36115831840833,0.129159823477731,1.01373675294467,0.234714477291508,0.2604087696879,0.104859344425711,0,0.864090018773596,0,0.608175645870493,0.308132871494482,0.909445760844565,0.179026695667481,0.79472541912506,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.201652370273681,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.965947970160952,1.12609485270709,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.31136204275253,3.19219898720825,2.90247129782028,0.972426868273176,0.209613162627982,0.919217542250071,0.666740183404846,2.06035057238894,0.962757628775446,1.76888048234658,0.760437899670719,1.50901073108861,0.561849044819294,1.21647789569252,1.20614484806788,2.38146845641537,0.927074607558844,0.964546102318525,1.23625770240992,1.91358596174717,2.05721551431249,1.95223386775271,0.476872379894642,0.726732083161643,0.846984423737976,1.77690676572521,1.64635175585495,1.31534855718921,1.08643291076689,3.92799590160417,1.66089025373844,0.689531376628944,2.04615521584845,0.464810523557898,1.73615949883027,1.24905288968973,1.40358965067245,1.07435527024149,0.765153328275374,1.32354851471709,0.695603506861264 | ||
|short_description=p2@Gja5 | |||
}} | }} |
Latest revision as of 00:51, 26 September 2015
Short description: | p2@Gja5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gja5_5end |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | 21bp_to_ENSMUST00000072600, ENSMUST00000132256, NM_008121, uc008qoo.1, uc008qop.1_5end |
EntrezGene: | Gja5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.43e-16 | 18 |
heart | 4.43e-16 | 18 |
primitive heart tube | 4.43e-16 | 18 |
primary heart field | 4.43e-16 | 18 |
anterior lateral plate mesoderm | 4.43e-16 | 18 |
heart tube | 4.43e-16 | 18 |
heart primordium | 4.43e-16 | 18 |
cardiac mesoderm | 4.43e-16 | 18 |
cardiogenic plate | 4.43e-16 | 18 |
heart rudiment | 4.43e-16 | 18 |
lung | 1.49e-14 | 14 |
respiratory tube | 1.49e-14 | 14 |
respiration organ | 1.49e-14 | 14 |
pair of lungs | 1.49e-14 | 14 |
lung primordium | 1.49e-14 | 14 |
lung bud | 1.49e-14 | 14 |
cardiovascular system | 1.31e-12 | 23 |
circulatory system | 1.31e-12 | 23 |
epithelial bud | 4.04e-11 | 17 |
thoracic cavity element | 4.04e-11 | 17 |
thoracic segment organ | 4.04e-11 | 17 |
thoracic cavity | 4.04e-11 | 17 |
thoracic segment of trunk | 4.04e-11 | 17 |
respiratory primordium | 4.04e-11 | 17 |
endoderm of foregut | 4.04e-11 | 17 |
splanchnic layer of lateral plate mesoderm | 7.49e-09 | 33 |
epithelial fold | 9.42e-09 | 20 |
compound organ | 1.18e-07 | 43 |