FFCP PHASE2:Hg19::chr8:38008461..38008477,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6770 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11359 |TSSclas...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6770 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11359 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 02:58, 18 September 2015
Short description: | p1@STAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STAR_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000520114_5end |
EntrezGene: | STAR |
HGNC: | 11359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@STAR |
---|
0
50
100
150
200
250
300
350
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 7.96e-08 | 2 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
gonad | 2.85e-22 | 21 |
indifferent external genitalia | 2.85e-22 | 21 |
indifferent gonad | 2.85e-22 | 21 |
gonad primordium | 2.85e-22 | 21 |
external genitalia | 4.00e-21 | 22 |
female gonad | 5.37e-21 | 13 |
right ovary | 6.83e-18 | 5 |
body cavity | 8.42e-12 | 46 |
body cavity precursor | 4.66e-11 | 54 |
body cavity or lining | 7.14e-11 | 49 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.30e-15 | 14 |
reproductive organ cancer | 2.60e-08 | 29 |
female reproductive organ cancer | 3.55e-07 | 27 |
chronic leukemia | 5.01e-07 | 8 |
Showing 1 to 4 of 4 entries