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FFCP PHASE1:Mm9::chr3:144423693..144423710,-: Difference between revisions

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(Created page with "{{FFCP |id=chr3:144423693..144423710,- |short_description=p1@Clca1 |description=CAGE_peak_1_at_Clca1_5end |association_with_transcript=0bp_to_NM_009899,uc008rpx.1,uc008rpy...")
 
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{{FFCP
{{FFCP
|id=chr3:144423693..144423710,-
|DHSsupport=NA
|short_description=p1@Clca1
|DPIdataset=NA
|description=CAGE_peak_1_at_Clca1_5end
|association_with_transcript=0bp_to_NM_009899,uc008rpx.1,uc008rpy.1_5end
|EntrezGene=12722
|EntrezGene=12722
|HGNC=
|HGNC=
|MCL_coexpression_id=333
|TSSclassifier=NA
|UniProt=Q9QX15,Q9R070
|UniProt=Q9QX15,Q9R070
|association_with_transcript=0bp_to_NM_009899,uc008rpx.1,uc008rpy.1_5end
|cluster_id=chr3:144423693..144423710,-
|description=CAGE_peak_1_at_Clca1_5end
|id=chr3:144423693..144423710,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004872!4.78e-10!33;UBERON:0005172!7.35e-09!49;UBERON:0005173!7.35e-09!49;UBERON:0002417!7.35e-09!49;UBERON:0000916!7.35e-09!49;UBERON:0003914!4.04e-08!47;UBERON:0000466!5.07e-08!79;UBERON:0009569!1.94e-07!66;UBERON:0003886!6.46e-07!38;UBERON:0002553!6.47e-07!39;UBERON:0002323!7.33e-07!37;UBERON:0004458!7.33e-07!37
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.39e-11,33;UBERON:0002323,4.11e-09,37;UBERON:0004458,4.11e-09,37;UBERON:0003886,1.17e-08,38;UBERON:0002553,3.13e-08,39;UBERON:0005172,8.85e-08,49;UBERON:0005173,8.85e-08,49;UBERON:0002417,8.85e-08,49;UBERON:0000916,8.85e-08,49;UBERON:0004535,3.38e-07,23;UBERON:0001009,3.38e-07,23;UBERON:0002106,3.72e-07,6;UBERON:0004457,3.72e-07,6;UBERON:0000042,3.72e-07,6;UBERON:0004854,3.72e-07,6;UBERON:0009034,3.72e-07,6;UBERON:0002095,3.72e-07,6;UBERON:0004782,3.72e-07,6;UBERON:0003281,3.72e-07,6;UBERON:0009664,3.72e-07,6;UBERON:0002296,3.72e-07,6;UBERON:0005602,3.72e-07,6;UBERON:0001179,3.72e-07,6;UBERON:0006293,3.72e-07,6;UBERON:0002100,6.86e-07,90;UBERON:0007100,7.77e-07,18;UBERON:0000948,7.77e-07,18;UBERON:0005498,7.77e-07,18;UBERON:0004140,7.77e-07,18;UBERON:0009881,7.77e-07,18;UBERON:0004141,7.77e-07,18;UBERON:0003084,7.77e-07,18;UBERON:0007005,7.77e-07,18;UBERON:0004139,7.77e-07,18;UBERON:0004291,7.77e-07,18
|phase1_expression=0.160148847104794,4.53668029931169,2.72999543633722,1.81478526784098,1.00179145989269,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,1.33243904726265,2.63217847606774,0,0.315462165358238,0,0,0.425216450755349,0,0,1.27993938234725,1.37645568640302,1.72269589234506,1.7230479846363,0.215471232685889,0.760093677825496,1.00812051903972,0.221730510655305,0,0,0,1.1554064790051,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0.506884656097573,3.30384153891027,6.25913075478431,0,0.878744730937887,1.36100929351998,0.699932108126813,1.43752564364972,0,0,0,261.890105884594,302.292779135388,591.475889842226,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0.294628585473668,0.142371680799103,0,0,0.453429360640713,2.6087803983151,3.44169550792555,0,0,0.649776417447669,0,0.702222100658759,0.170430322578058,0,0.35333957451034,0,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,2.96878087269556,14.2415836005944,0.148442139064825,0.520455980298408,2.43572382649713,2.53677046981664,4.82312449768392,11.4061045921634,0.251333182659351,85.0350689006246,2.16899035379867,1.76922110389975,0.161766849947409,0.883366073841574,0,0,0,0,1.27728527604296,0,0,0,0,0.457500602818626,0,0,0,0,0,1.12023300235348,0.622034853050465,0.758168275301024,0,0,0,0,0.150704817835715,0.340182495756639,0.2562274405697,0,0,0,0,0,0.219195732427575,0,1.0447564995665,0.823128545631774,4.57778813682534,0,0,0,4.97101854085205,3.51789089971644,2.34080679899319,5.68187365404505,4.72234156193769,3.70241070929708,2.79040733700489,3.48755421819505,8.52386999280337,1.97471819896177,0.492502392237286,0.324275238183423,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0,2.64450566663544,1.2797295032114,0.928946687441754,0.902072229254653,1.21010114774006,1.11189021922435,0.951128130562796,0,1.31759163779209,0.754005626400808,0.596869416123452,0.38992817423824,0,1.29682829924817,0.597423819763102,1.89667900953082,1.02823661348756,1.1270773567308,0.610953983535943,1.55161989734101,5.40045813155453,1.39120381673366,0.738050739898011,1.41298855057237,4.07210640941942,1.77871576252289,0.333690211432188,0.589676985339609,0.674586337154561,1.01430060694251,0.964708639009667,3.8193877767213,6.32931502391783,8.59316701907687,0.823684239564244,2.87536413054709,2.97712758134803,1.5601883655728,0.252578877947112,1.25578189465339,0.482443521363367,0,1.13694847062291,0.651859905768103,0.509235257325564,0,0.502518772325447,3.33261097240419,8.00047956216975,0.472905432318573,0.44292937929755,0,0.491589944147214,0,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0.252470927204373,1.26203287766503,0.390438744296638,1.50796378412959,4.77937595905104,6.01556420022464,7.07691326972081,4.04810701674894,2.33804686329049,4.74345333535828,4.4984984299053,1.70328102249922,0.178065603667255,1.62886959353576,1.48473110675282,0,1.69946445308487,6.65111825322452,8.48722858901541,2.95301892880773,3.68922177532713,3.87642439752332,0.727067458955011,1.06949213515416,0,0,0,0,0,0,0,0.709360934569094,0,0.164549020602121,0,0.23467170806371,1.0591603543191,0.441056796109924,0.49465875882444,1.13025098687134,0.241251699712623,0,0.492422699235184,0.291480836629851,0.18542530201051,14.6948957486153,24.147263551697,41.2983796034457,8.4765805652111,7.92826520781946,7.54967971581525,0,0,0,0,1.26534397432454,4.87966721104437,0.86404272657441,0.209088296014469,0.436725127492355,0,0.330613822901344,0.26175594198403,0.777689839750757,0.621339313086926,0,14.8021380583539,5.46013018508422,5.44463327363333,3.48731523389874,3.54807863530634,3.28600268208111,1.3020438484395,1.15345278868282,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0.895133478337407,0.596044064343795,0,0.147689527174577,0.403865799792591,0,0.201652370273681,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0.965947970160952,1.31377732815827,1.28206136987086,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.183843508450014,1.55572709461131,1.23621034343337,0.962757628775446,2.02157769411038,0.760437899670719,1.13175804831646,0.749132059759059,0.768301828858431,0.574354689556133,0,0.463537303779422,0.578727661391115,0.824171801606613,0.735994600671987,0.342869252385415,0.177475806159338,0.953744759789284,0.872078499793971,0.752875043322645,0.507687647350059,0.365855945745545,1.31534855718921,0.271608227691724,0.561142271657738,0.593175090620871,0.394017929502254,1.22769312950907,0.309873682371932,0.771626443924566,0,1.40358965067245,2.57845264857958,2.67803664896381,0.441182838239031,0.927471342481686
|phase1_expression=0.160148847104794,4.53668029931169,2.72999543633722,1.81478526784098,1.00179145989269,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,1.33243904726265,2.63217847606774,0,0.315462165358238,0,0,0.425216450755349,0,0,1.27993938234725,1.37645568640302,1.72269589234506,1.7230479846363,0.215471232685889,0.760093677825496,1.00812051903972,0.221730510655305,0,0,0,1.1554064790051,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0.506884656097573,3.30384153891027,6.25913075478431,0,0.878744730937887,1.36100929351998,0.699932108126813,1.43752564364972,0,0,0,261.890105884594,302.292779135388,591.475889842226,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0.294628585473668,0.142371680799103,0,0,0.453429360640713,2.6087803983151,3.44169550792555,0,0,0.649776417447669,0,0.702222100658759,0.170430322578058,0,0.35333957451034,0,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,2.96878087269556,14.2415836005944,0.148442139064825,0.520455980298408,2.43572382649713,2.53677046981664,4.82312449768392,11.4061045921634,0.251333182659351,85.0350689006246,2.16899035379867,1.76922110389975,0.161766849947409,0.883366073841574,0,0,0,0,1.27728527604296,0,0,0,0,0.457500602818626,0,0,0,0,0,1.12023300235348,0.622034853050465,0.758168275301024,0,0,0,0,0.150704817835715,0.340182495756639,0.2562274405697,0,0,0,0,0,0.219195732427575,0,1.0447564995665,0.823128545631774,4.57778813682534,0,0,0,4.97101854085205,3.51789089971644,2.34080679899319,5.68187365404505,4.72234156193769,3.70241070929708,2.79040733700489,3.48755421819505,8.52386999280337,1.97471819896177,0.492502392237286,0.324275238183423,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0,2.64450566663544,1.2797295032114,0.928946687441754,0.902072229254653,1.21010114774006,1.11189021922435,0.951128130562796,0,1.31759163779209,0.754005626400808,0.596869416123452,0.38992817423824,0,1.29682829924817,0.597423819763102,1.89667900953082,1.02823661348756,1.1270773567308,0.610953983535943,1.55161989734101,5.40045813155453,1.39120381673366,0.738050739898011,1.41298855057237,4.07210640941942,1.77871576252289,0.333690211432188,0.589676985339609,0.674586337154561,1.01430060694251,0.964708639009667,3.8193877767213,6.32931502391783,8.59316701907687,0.823684239564244,2.87536413054709,2.97712758134803,1.5601883655728,0.252578877947112,1.25578189465339,0.482443521363367,0,1.13694847062291,0.651859905768103,0.509235257325564,0,0.502518772325447,3.33261097240419,8.00047956216975,0.472905432318573,0.44292937929755,0,0.491589944147214,0,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0.252470927204373,1.26203287766503,0.390438744296638,1.50796378412959,4.77937595905104,6.01556420022464,7.07691326972081,4.04810701674894,2.33804686329049,4.74345333535828,4.4984984299053,1.70328102249922,0.178065603667255,1.62886959353576,1.48473110675282,0,1.69946445308487,6.65111825322452,8.48722858901541,2.95301892880773,3.68922177532713,3.87642439752332,0.727067458955011,1.06949213515416,0,0,0,0,0,0,0,0.709360934569094,0,0.164549020602121,0,0.23467170806371,1.0591603543191,0.441056796109924,0.49465875882444,1.13025098687134,0.241251699712623,0,0.492422699235184,0.291480836629851,0.18542530201051,14.6948957486153,24.147263551697,41.2983796034457,8.4765805652111,7.92826520781946,7.54967971581525,0,0,0,0,1.26534397432454,4.87966721104437,0.86404272657441,0.209088296014469,0.436725127492355,0,0.330613822901344,0.26175594198403,0.777689839750757,0.621339313086926,0,14.8021380583539,5.46013018508422,5.44463327363333,3.48731523389874,3.54807863530634,3.28600268208111,1.3020438484395,1.15345278868282,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0.895133478337407,0.596044064343795,0,0.147689527174577,0.403865799792591,0,0.201652370273681,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0.965947970160952,1.31377732815827,1.28206136987086,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.183843508450014,1.55572709461131,1.23621034343337,0.962757628775446,2.02157769411038,0.760437899670719,1.13175804831646,0.749132059759059,0.768301828858431,0.574354689556133,0,0.463537303779422,0.578727661391115,0.824171801606613,0.735994600671987,0.342869252385415,0.177475806159338,0.953744759789284,0.872078499793971,0.752875043322645,0.507687647350059,0.365855945745545,1.31534855718921,0.271608227691724,0.561142271657738,0.593175090620871,0.394017929502254,1.22769312950907,0.309873682371932,0.771626443924566,0,1.40358965067245,2.57845264857958,2.67803664896381,0.441182838239031,0.927471342481686
|short_description=p1@Clca1
}}
}}

Latest revision as of 18:14, 1 October 2015

Short description:p1@Clca1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Clca1_5end
Coexpression cluster:MCL_coexpression_mm9:333
Association with transcript: 0bp_to_NM_009899, uc008rpx.1, uc008rpy.1_5end
EntrezGene:Clca1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Clca1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1261.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1302.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5591.48
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H914.24
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C111.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A885.04
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I64.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E38.52
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G75.40
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F48.59
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E58.49
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G214.69
spleen, embryo E16.CNhs11035.461-43C124.15
spleen, embryo E18.CNhs11011.1271-21F241.30
spleen, neonate N10.CNhs11116.752-24D18.48
spleen, neonate N20.CNhs11112.824-19H17.93
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F514.80
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
splanchnic layer of lateral plate mesoderm4.39e-1133
body cavity4.11e-0937
body cavity or lining4.11e-0937
body cavity precursor1.17e-0838
anatomical cavity3.13e-0839
abdomen element8.85e-0849
abdominal segment element8.85e-0849
abdominal segment of trunk8.85e-0849
abdomen8.85e-0849
cardiovascular system3.38e-0723
circulatory system3.38e-0723
spleen3.72e-076
cavity lining3.72e-076
serous membrane3.72e-076
gastrointestinal system mesentery3.72e-076
stomach region3.72e-076
mesentery3.72e-076
gastrointestinal system serosa3.72e-076
mesentery of stomach3.72e-076
gut mesentery3.72e-076
dorsal mesentery3.72e-076
dorsal mesogastrium3.72e-076
peritoneal cavity3.72e-076
spleen primordium3.72e-076
trunk6.86e-0790
primary circulatory organ7.77e-0718
heart7.77e-0718
primitive heart tube7.77e-0718
primary heart field7.77e-0718
anterior lateral plate mesoderm7.77e-0718
heart tube7.77e-0718
heart primordium7.77e-0718
cardiac mesoderm7.77e-0718
cardiogenic plate7.77e-0718
heart rudiment7.77e-0718
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