FFCP PHASE1:Mm9::chr3:106487861..106487939,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:106487861..106487939,+
|short_description=p2@4933421E11Rik
|description=CAGE_peak_2_at_4933421E11Rik_5end
|association_with_transcript=0bp_to_ENSMUST000000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=321000 | |EntrezGene=321000 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=G3X9P5 | |UniProt=G3X9P5 | ||
|association_with_transcript=0bp_to_ENSMUST00000098751,ENSMUST00000156544,NM_001039478,uc008qwh.1_5end | |||
|cluster_id=chr3:106487861..106487939,+ | |||
|description=CAGE_peak_2_at_4933421E11Rik_5end | |||
|id=chr3:106487861..106487939,+ | |||
|ontology_enrichment_celltype=CL:0000393!8.46e-07!39;CL:0000211!8.46e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.68e-07,39;CL:0000211,7.68e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.20e-15,64;UBERON:0003075,6.20e-15,64;UBERON:0007284,6.20e-15,64;UBERON:0001017,9.47e-15,73;UBERON:0001016,1.59e-13,75;UBERON:0000073,6.08e-13,54;UBERON:0003056,1.64e-12,49;UBERON:0004121,5.58e-12,95;UBERON:0000924,5.58e-12,95;UBERON:0006601,5.58e-12,95;UBERON:0000955,6.01e-12,47;UBERON:0006238,6.01e-12,47;UBERON:0001049,6.61e-12,52;UBERON:0005068,6.61e-12,52;UBERON:0006241,6.61e-12,52;UBERON:0007135,6.61e-12,52;UBERON:0010371,8.40e-12,73;UBERON:0002616,2.09e-11,46;UBERON:0003080,4.81e-11,40;UBERON:0010314,5.82e-11,92;UBERON:0002780,1.69e-10,39;UBERON:0001890,1.69e-10,39;UBERON:0006240,1.69e-10,39;UBERON:0003528,1.03e-08,29;UBERON:0002791,1.03e-08,29;UBERON:0001893,1.03e-08,29;UBERON:0002020,1.30e-08,34;UBERON:0002021,4.13e-08,10;UBERON:0000411,4.13e-08,10;UBERON:0001950,4.13e-08,10 | |||
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| ||
|short_description=p2@4933421E11Rik | |||
}} | }} |
Latest revision as of 06:26, 27 September 2015
Short description: | p2@4933421E11Rik |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_4933421E11Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000098751, ENSMUST00000156544, NM_001039478, uc008qwh.1_5end |
EntrezGene: | 4933421E11Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.68e-07 | 39 |
electrically active cell | 7.68e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 6.20e-15 | 64 |
neural plate | 6.20e-15 | 64 |
presumptive neural plate | 6.20e-15 | 64 |
central nervous system | 9.47e-15 | 73 |
nervous system | 1.59e-13 | 75 |
regional part of nervous system | 6.08e-13 | 54 |
pre-chordal neural plate | 1.64e-12 | 49 |
ectoderm-derived structure | 5.58e-12 | 95 |
ectoderm | 5.58e-12 | 95 |
presumptive ectoderm | 5.58e-12 | 95 |
brain | 6.01e-12 | 47 |
future brain | 6.01e-12 | 47 |
neural tube | 6.61e-12 | 52 |
neural rod | 6.61e-12 | 52 |
future spinal cord | 6.61e-12 | 52 |
neural keel | 6.61e-12 | 52 |
ecto-epithelium | 8.40e-12 | 73 |
regional part of brain | 2.09e-11 | 46 |
anterior neural tube | 4.81e-11 | 40 |
structure with developmental contribution from neural crest | 5.82e-11 | 92 |
regional part of forebrain | 1.69e-10 | 39 |
forebrain | 1.69e-10 | 39 |
future forebrain | 1.69e-10 | 39 |
brain grey matter | 1.03e-08 | 29 |
regional part of telencephalon | 1.03e-08 | 29 |
telencephalon | 1.03e-08 | 29 |
gray matter | 1.30e-08 | 34 |
occipital lobe | 4.13e-08 | 10 |
visual cortex | 4.13e-08 | 10 |
neocortex | 4.13e-08 | 10 |