FFCP PHASE1:Mm9::chr2:84667169..84667224,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:84667169..84667224,+
|short_description=p1@Timm10
|description=CAGE_peak_1_at_Timm10_5end
|association_with_transcript=0bp_to_NM_013899,uc008kjh.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=30059 | |EntrezGene=30059 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2ATS2,P62073 | |UniProt=A2ATS2,P62073 | ||
|association_with_transcript=0bp_to_NM_013899,uc008kjh.2_5end | |||
|cluster_id=chr2:84667169..84667224,+ | |||
|description=CAGE_peak_1_at_Timm10_5end | |||
|id=chr2:84667169..84667224,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.09e-11!115;CL:0000004!1.09e-11!115;CL:0000255!1.09e-11!115;CL:0002371!4.90e-10!118;CL:0000144!3.61e-09!121;CL:0000012!3.61e-09!121;CL:0000034!7.08e-09!97;CL:0000723!8.84e-09!91;CL:0000048!8.84e-09!91;CL:0000219!6.79e-08!54;CL:0000117!1.51e-07!23;CL:0000337!1.51e-07!23;CL:0000221!3.05e-07!44;CL:0000133!3.05e-07!44;CL:0002319!5.66e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,7.08e-09,97;CL:0000723,8.84e-09,91;CL:0000048,8.84e-09,91;CL:0000219,6.79e-08,54;CL:0000117,1.51e-07,23;CL:0000337,1.51e-07,23;CL:0000221,3.05e-07,44;CL:0000133,3.05e-07,44;CL:0002319,5.66e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.99e-12!34;UBERON:0000073!3.93e-11!75;UBERON:0001016!3.93e-11!75;UBERON:0001017!6.88e-11!73;UBERON:0005743!6.88e-11!73;UBERON:0001049!2.54e-10!52;UBERON:0005068!2.54e-10!52;UBERON:0006241!2.54e-10!52;UBERON:0007135!2.54e-10!52;UBERON:0002791!3.51e-10!29;UBERON:0003528!3.51e-10!29;UBERON:0001893!3.51e-10!29;UBERON:0000955!7.61e-10!50;UBERON:0006238!7.61e-10!50;UBERON:0002616!1.44e-09!49;UBERON:0000025!6.35e-09!114;UBERON:0003080!1.64e-07!40;UBERON:0004111!1.65e-07!122;UBERON:0000956!1.98e-07!21;UBERON:0001869!1.98e-07!21;UBERON:0000203!1.98e-07!21;UBERON:0002780!2.53e-07!39;UBERON:0001890!2.53e-07!39;UBERON:0006240!2.53e-07!39;UBERON:0002619!4.43e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.99e-12,34;UBERON:0000073,1.18e-11,54;UBERON:0001016,3.93e-11,75;UBERON:0001017,6.88e-11,73;UBERON:0001049,2.54e-10,52;UBERON:0005068,2.54e-10,52;UBERON:0006241,2.54e-10,52;UBERON:0007135,2.54e-10,52;UBERON:0003528,3.51e-10,29;UBERON:0002791,3.51e-10,29;UBERON:0001893,3.51e-10,29;UBERON:0010314,4.67e-10,92;UBERON:0000025,6.35e-09,114;UBERON:0000955,6.73e-09,47;UBERON:0006238,6.73e-09,47;UBERON:0002616,1.25e-08,46;UBERON:0003080,1.64e-07,40;UBERON:0004111,1.65e-07,122;UBERON:0000956,1.98e-07,21;UBERON:0001869,1.98e-07,21;UBERON:0000203,1.98e-07,21;UBERON:0002780,2.53e-07,39;UBERON:0001890,2.53e-07,39;UBERON:0006240,2.53e-07,39;UBERON:0002619,4.43e-07,17 | |||
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| ||
|short_description=p1@Timm10 | |||
}} | }} |
Latest revision as of 01:53, 27 September 2015
Short description: | p1@Timm10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Timm10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_013899, uc008kjh.2_5end |
EntrezGene: | Timm10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 7.08e-09 | 97 |
somatic stem cell | 8.84e-09 | 91 |
multi fate stem cell | 8.84e-09 | 91 |
motile cell | 6.79e-08 | 54 |
CNS neuron (sensu Vertebrata) | 1.51e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.51e-07 | 23 |
ectodermal cell | 3.05e-07 | 44 |
neurectodermal cell | 3.05e-07 | 44 |
neural cell | 5.66e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.99e-12 | 34 |
regional part of nervous system | 1.18e-11 | 54 |
nervous system | 3.93e-11 | 75 |
central nervous system | 6.88e-11 | 73 |
neural tube | 2.54e-10 | 52 |
neural rod | 2.54e-10 | 52 |
future spinal cord | 2.54e-10 | 52 |
neural keel | 2.54e-10 | 52 |
brain grey matter | 3.51e-10 | 29 |
regional part of telencephalon | 3.51e-10 | 29 |
telencephalon | 3.51e-10 | 29 |
structure with developmental contribution from neural crest | 4.67e-10 | 92 |
tube | 6.35e-09 | 114 |
brain | 6.73e-09 | 47 |
future brain | 6.73e-09 | 47 |
regional part of brain | 1.25e-08 | 46 |
anterior neural tube | 1.64e-07 | 40 |
anatomical conduit | 1.65e-07 | 122 |
cerebral cortex | 1.98e-07 | 21 |
cerebral hemisphere | 1.98e-07 | 21 |
pallium | 1.98e-07 | 21 |
regional part of forebrain | 2.53e-07 | 39 |
forebrain | 2.53e-07 | 39 |
future forebrain | 2.53e-07 | 39 |
regional part of cerebral cortex | 4.43e-07 | 17 |