FFCP PHASE2:Hg19::chr6:30853057..30853093,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:780 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:2730 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2730 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E7ERN0 | ||
|association_with_transcript=0bp_to_ENST00000512725_5end | |association_with_transcript=0bp_to_ENST00000512725_5end | ||
|cluster_id=chr6:30853057..30853093,+ | |cluster_id=chr6:30853057..30853093,+ |
Latest revision as of 19:15, 17 September 2015
Short description: | p19@DDR1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_DDR1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000512725_5end |
EntrezGene: | DDR1 |
HGNC: | 2730 |
UniProt: | E7ERN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p19@DDR1 |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.33e-09 | 3 |
kidney cortex tubule cell | 6.33e-09 | 3 |
epithelial cell of proximal tubule | 6.33e-09 | 3 |
perirenal preadipocyte | 3.02e-07 | 1 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 5.91e-60 | 56 |
neural rod | 5.91e-60 | 56 |
future spinal cord | 5.91e-60 | 56 |
neural keel | 5.91e-60 | 56 |
regional part of nervous system | 1.74e-48 | 53 |
regional part of brain | 1.74e-48 | 53 |
central nervous system | 8.05e-47 | 81 |
nervous system | 9.99e-42 | 89 |
brain | 4.35e-40 | 68 |
future brain | 4.35e-40 | 68 |
Showing 1 to 10 of 95 entries