Personal tools

FFCP PHASE2:Hg19::chr6:30853057..30853093,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:780 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:2730 |TSSclassi...")
 
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:780
|EntrezGene=780
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:2730
|HGNC=2730
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:E7ERN0
|UniProt=E7ERN0
|association_with_transcript=0bp_to_ENST00000512725_5end
|association_with_transcript=0bp_to_ENST00000512725_5end
|cluster_id=chr6:30853057..30853093,+
|cluster_id=chr6:30853057..30853093,+

Latest revision as of 19:15, 17 September 2015

Short description:p19@DDR1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_19_at_DDR1_5end
Coexpression cluster:C4_optic_corpus_substantia_medulla_spinal_thalamus_globus
Association with transcript: 0bp_to_ENST00000512725_5end
EntrezGene:DDR1
HGNC: 2730
UniProt: E7ERN0
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data