FFCP PHASE1:Mm9::chr2:50152414..50152430,+: Difference between revisions
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|id=chr2:50152414..50152430,+
|short_description=p2@ENSMUST00000123699
|description=CAGE_peak_2_at_ENSMUST00000123699_5end
|association_with_transcript=30bp_to_ENSM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1028 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENSMUST00000123699_5end | |||
|cluster_id=chr2:50152414..50152430,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000123699_5end | |||
|id=chr2:50152414..50152430,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.96e-19,7;CL:0000192,3.99e-17,3;CL:0000359,3.99e-17,3;CL:0002539,3.99e-17,3;CL:0000514,3.99e-17,3;CL:0000680,1.63e-14,6;CL:0000187,1.63e-14,6;CL:0000056,1.63e-14,6;CL:0000355,9.63e-10,9;CL:0002293,2.05e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.16e-17,5;UBERON:0007500,1.16e-17,5;UBERON:0001981,1.16e-17,5;UBERON:0002049,1.16e-17,5;UBERON:0007798,1.16e-17,5;UBERON:0004537,1.16e-17,5;UBERON:0006965,1.16e-17,5;UBERON:0001135,3.99e-17,3;UBERON:0004237,3.99e-17,3;UBERON:0004695,3.99e-17,3;UBERON:0002111,3.99e-17,3;UBERON:0004178,3.99e-17,3;UBERON:0000947,5.50e-13,4;UBERON:0001637,5.50e-13,4;UBERON:0004573,5.50e-13,4;UBERON:0003509,5.50e-13,4;UBERON:0004571,5.50e-13,4;UBERON:0010191,5.50e-13,4;UBERON:0004572,5.50e-13,4;UBERON:0001134,9.63e-10,9;UBERON:0002036,9.63e-10,9;UBERON:0002385,9.63e-10,9;UBERON:0000486,9.63e-10,9;UBERON:0007503,9.63e-10,9;UBERON:0001015,9.63e-10,9;UBERON:0002329,9.63e-10,9;UBERON:0003082,9.63e-10,9;UBERON:0003059,9.63e-10,9;UBERON:0007282,9.63e-10,9;UBERON:0004290,9.63e-10,9;UBERON:0009618,9.63e-10,9;UBERON:0000383,8.75e-09,10;UBERON:0007524,5.34e-08,11;UBERON:0003077,5.34e-08,11;UBERON:0007285,5.34e-08,11 | |||
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| ||
|short_description=p2@ENSMUST00000123699 | |||
}} | }} |
Latest revision as of 05:35, 5 August 2015
Short description: | p2@ENSMUST00000123699 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000123699_5end |
Coexpression cluster: | MCL_coexpression_mm9:1028 |
Association with transcript: | 30bp_to_ENSMUST00000123699_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.96e-19 | 7 |
smooth muscle cell | 3.99e-17 | 3 |
vascular associated smooth muscle cell | 3.99e-17 | 3 |
aortic smooth muscle cell | 3.99e-17 | 3 |
smooth muscle myoblast | 3.99e-17 | 3 |
muscle precursor cell | 1.63e-14 | 6 |
muscle cell | 1.63e-14 | 6 |
myoblast | 1.63e-14 | 6 |
multi-potent skeletal muscle stem cell | 9.63e-10 | 9 |
epithelial cell of thymus | 2.05e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.16e-17 | 5 |
epithelial tube open at both ends | 1.16e-17 | 5 |
blood vessel | 1.16e-17 | 5 |
vasculature | 1.16e-17 | 5 |
vascular system | 1.16e-17 | 5 |
blood vasculature | 1.16e-17 | 5 |
vascular cord | 1.16e-17 | 5 |
smooth muscle tissue | 3.99e-17 | 3 |
blood vessel smooth muscle | 3.99e-17 | 3 |
arterial system smooth muscle | 3.99e-17 | 3 |
artery smooth muscle tissue | 3.99e-17 | 3 |
aorta smooth muscle tissue | 3.99e-17 | 3 |
aorta | 5.50e-13 | 4 |
artery | 5.50e-13 | 4 |
systemic artery | 5.50e-13 | 4 |
arterial blood vessel | 5.50e-13 | 4 |
systemic arterial system | 5.50e-13 | 4 |
aortic system | 5.50e-13 | 4 |
arterial system | 5.50e-13 | 4 |
skeletal muscle tissue | 9.63e-10 | 9 |
striated muscle tissue | 9.63e-10 | 9 |
muscle tissue | 9.63e-10 | 9 |
multilaminar epithelium | 9.63e-10 | 9 |
epithelial vesicle | 9.63e-10 | 9 |
musculature | 9.63e-10 | 9 |
somite | 9.63e-10 | 9 |
myotome | 9.63e-10 | 9 |
presomitic mesoderm | 9.63e-10 | 9 |
presumptive segmental plate | 9.63e-10 | 9 |
dermomyotome | 9.63e-10 | 9 |
trunk paraxial mesoderm | 9.63e-10 | 9 |
musculature of body | 8.75e-09 | 10 |
dense mesenchyme tissue | 5.34e-08 | 11 |
paraxial mesoderm | 5.34e-08 | 11 |
presumptive paraxial mesoderm | 5.34e-08 | 11 |