FFCP PHASE1:Mm9::chr2:32143505..32143516,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:32143505..32143516,-
|short_description=p3@Swi5
|description=CAGE_peak_3_at_Swi5_5end
|association_with_transcript=8bp_to_ENSMUST00000113397_5end
|EntrezG...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72931 | |EntrezGene=72931 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3343 | |||
|TSSclassifier=NA | |||
|UniProt=A2AN40 | |UniProt=A2AN40 | ||
|association_with_transcript=8bp_to_ENSMUST00000113397_5end | |||
|cluster_id=chr2:32143505..32143516,- | |||
|description=CAGE_peak_3_at_Swi5_5end | |||
|id=chr2:32143505..32143516,- | |||
|ontology_enrichment_celltype=CL:0000221!1.10e-11!44;CL:0000133!1.10e-11!44;CL:0002319!1.27e-11!43;CL:0000055!2.02e-10!50;CL:0000540!2.46e-07!33;CL:0000047!2.46e-07!33;CL:0000031!2.46e-07!33;CL:0000404!2.46e-07!33;CL:0000393!3.72e-07!39;CL:0000211!3.72e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.10e-11,44;CL:0000133,1.10e-11,44;CL:0002319,1.27e-11,43;CL:0000540,2.46e-07,33;CL:0000047,2.46e-07,33;CL:0000031,2.46e-07,33;CL:0000404,2.46e-07,33;CL:0000393,3.72e-07,39;CL:0000211,3.72e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.69e-12!75;UBERON:0001016!5.69e-12!75;UBERON:0001017!1.26e-11!73;UBERON:0005743!1.26e-11!73;UBERON:0002020!2.20e-08!34;UBERON:0001049!4.46e-08!52;UBERON:0005068!4.46e-08!52;UBERON:0006241!4.46e-08!52;UBERON:0007135!4.46e-08!52;UBERON:0002780!1.10e-07!39;UBERON:0001890!1.10e-07!39;UBERON:0006240!1.10e-07!39;UBERON:0003080!1.54e-07!40;UBERON:0003056!2.08e-07!49;UBERON:0002346!2.84e-07!71;UBERON:0003075!2.84e-07!71;UBERON:0007284!2.84e-07!71;UBERON:0004121!4.25e-07!102;UBERON:0000924!4.25e-07!102;UBERON:0006601!4.25e-07!102;UBERON:0002791!9.69e-07!29;UBERON:0003528!9.69e-07!29;UBERON:0001893!9.69e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.69e-12,75;UBERON:0001017,1.26e-11,73;UBERON:0002346,8.30e-09,64;UBERON:0003075,8.30e-09,64;UBERON:0007284,8.30e-09,64;UBERON:0002020,2.20e-08,34;UBERON:0004121,3.08e-08,95;UBERON:0000924,3.08e-08,95;UBERON:0006601,3.08e-08,95;UBERON:0001049,4.46e-08,52;UBERON:0005068,4.46e-08,52;UBERON:0006241,4.46e-08,52;UBERON:0007135,4.46e-08,52;UBERON:0000073,7.44e-08,54;UBERON:0002780,1.10e-07,39;UBERON:0001890,1.10e-07,39;UBERON:0006240,1.10e-07,39;UBERON:0003080,1.54e-07,40;UBERON:0003056,2.08e-07,49;UBERON:0002616,5.12e-07,46;UBERON:0010371,6.85e-07,73;UBERON:0003528,9.69e-07,29;UBERON:0002791,9.69e-07,29;UBERON:0001893,9.69e-07,29 | |||
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| ||
|short_description=p3@Swi5 | |||
}} | }} |
Latest revision as of 14:07, 26 September 2015
Short description: | p3@Swi5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Swi5_5end |
Coexpression cluster: | MCL_coexpression_mm9:3343 |
Association with transcript: | 8bp_to_ENSMUST00000113397_5end |
EntrezGene: | Swi5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.10e-11 | 44 |
neurectodermal cell | 1.10e-11 | 44 |
neural cell | 1.27e-11 | 43 |
neuron | 2.46e-07 | 33 |
neuronal stem cell | 2.46e-07 | 33 |
neuroblast | 2.46e-07 | 33 |
electrically signaling cell | 2.46e-07 | 33 |
electrically responsive cell | 3.72e-07 | 39 |
electrically active cell | 3.72e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.69e-12 | 75 |
central nervous system | 1.26e-11 | 73 |
neurectoderm | 8.30e-09 | 64 |
neural plate | 8.30e-09 | 64 |
presumptive neural plate | 8.30e-09 | 64 |
gray matter | 2.20e-08 | 34 |
ectoderm-derived structure | 3.08e-08 | 95 |
ectoderm | 3.08e-08 | 95 |
presumptive ectoderm | 3.08e-08 | 95 |
neural tube | 4.46e-08 | 52 |
neural rod | 4.46e-08 | 52 |
future spinal cord | 4.46e-08 | 52 |
neural keel | 4.46e-08 | 52 |
regional part of nervous system | 7.44e-08 | 54 |
regional part of forebrain | 1.10e-07 | 39 |
forebrain | 1.10e-07 | 39 |
future forebrain | 1.10e-07 | 39 |
anterior neural tube | 1.54e-07 | 40 |
pre-chordal neural plate | 2.08e-07 | 49 |
regional part of brain | 5.12e-07 | 46 |
ecto-epithelium | 6.85e-07 | 73 |
brain grey matter | 9.69e-07 | 29 |
regional part of telencephalon | 9.69e-07 | 29 |
telencephalon | 9.69e-07 | 29 |