FFCP PHASE1:Mm9::chr2:28302351..28302398,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:28302351..28302398,+
|short_description=p1@Ppp1r26
|description=CAGE_peak_1_at_Ppp1r26_5end
|association_with_transcript=0bp_to_ENSMUST00000150362_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=241289 | |EntrezGene=241289 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1187 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000150362_5end | |||
|cluster_id=chr2:28302351..28302398,+ | |||
|description=CAGE_peak_1_at_Ppp1r26_5end | |||
|id=chr2:28302351..28302398,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.97e-13!33;CL:0000047!1.97e-13!33;CL:0000031!1.97e-13!33;CL:0000404!1.97e-13!33;CL:0000117!2.92e-12!23;CL:0000337!2.92e-12!23;CL:0000221!9.99e-10!44;CL:0000133!9.99e-10!44;CL:0000393!2.01e-09!39;CL:0000211!2.01e-09!39;CL:0002319!2.21e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.44e-14,33;CL:0000047,3.44e-14,33;CL:0000031,3.44e-14,33;CL:0000404,3.44e-14,33;CL:0000117,7.14e-13,23;CL:0000337,7.14e-13,23;CL:0000393,1.35e-09,39;CL:0000211,1.35e-09,39;CL:0000221,1.62e-09,44;CL:0000133,1.62e-09,44;CL:0002319,3.76e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.37e-23!102;UBERON:0000924!7.37e-23!102;UBERON:0006601!7.37e-23!102;UBERON:0001017!1.35e-21!73;UBERON:0005743!1.35e-21!73;UBERON:0000073!5.97e-21!75;UBERON:0001016!5.97e-21!75;UBERON:0002346!9.75e-21!71;UBERON:0003075!9.75e-21!71;UBERON:0007284!9.75e-21!71;UBERON:0000033!1.19e-18!63;UBERON:0001049!2.16e-17!52;UBERON:0005068!2.16e-17!52;UBERON:0006241!2.16e-17!52;UBERON:0007135!2.16e-17!52;UBERON:0003056!7.15e-16!49;UBERON:0000955!1.24e-15!50;UBERON:0006238!1.24e-15!50;UBERON:0002616!4.85e-15!49;UBERON:0003080!2.96e-13!40;UBERON:0002780!1.23e-12!39;UBERON:0001890!1.23e-12!39;UBERON:0006240!1.23e-12!39;UBERON:0002020!1.30e-11!34;UBERON:0000468!1.67e-09!333;UBERON:0002791!1.17e-08!29;UBERON:0003528!1.17e-08!29;UBERON:0001893!1.17e-08!29;UBERON:0000153!2.90e-08!94;UBERON:0000922!4.69e-08!328;UBERON:0007811!6.94e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.85e-23,73;UBERON:0002346,3.57e-22,64;UBERON:0003075,3.57e-22,64;UBERON:0007284,3.57e-22,64;UBERON:0001016,9.29e-22,75;UBERON:0004121,2.64e-21,95;UBERON:0000924,2.64e-21,95;UBERON:0006601,2.64e-21,95;UBERON:0010314,1.32e-19,92;UBERON:0000073,1.53e-19,54;UBERON:0001049,1.34e-18,52;UBERON:0005068,1.34e-18,52;UBERON:0006241,1.34e-18,52;UBERON:0007135,1.34e-18,52;UBERON:0010371,1.35e-18,73;UBERON:0003056,4.09e-17,49;UBERON:0000955,2.38e-15,47;UBERON:0006238,2.38e-15,47;UBERON:0002616,1.02e-14,46;UBERON:0003080,2.94e-14,40;UBERON:0002780,1.39e-13,39;UBERON:0001890,1.39e-13,39;UBERON:0006240,1.39e-13,39;UBERON:0002020,1.82e-12,34;UBERON:0003528,3.01e-09,29;UBERON:0002791,3.01e-09,29;UBERON:0001893,3.01e-09,29;UBERON:0000922,1.55e-07,320;UBERON:0004111,3.19e-07,122;UBERON:0000025,8.02e-07,114 | |||
|phase1_expression=1.76163731815273,0.348975407639361,0,0,0.500895729946347,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0.198581902401771,0,0.159992422793407,0,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.872100625521786,1.31811709640683,1.1665793944457,0.419959264876088,0,0,0,0,0,0.286533439938757,0.515672092277442,7.48570905180512,9.52183762689659,6.97214543856797,0.677689064138264,0,0,0,0,0.898800331555214,1.92109152660777,2.17748185847803,2.97013064329719,4.20649922702764,5.99867067247988,4.8591079009355,3.42974237801871,4.02550978276593,3.67687514644008,2.20231761998777,3.95830748064082,4.30098293117482,12.265424758908,16.0103376304217,10.4182674111352,4.74611098302348,0.56276261003168,3.51435969886663,5.30331453852602,7.83044244395066,9.31997229126503,0.681535739998656,1.058001841495,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,3.23939865486365,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.34255163915718,0.517875767294343,2.22663208597237,2.60227990149204,0.913396434936424,1.84492397804847,1.95939432718409,1.76383060703557,1.13099932196708,0.247194967734374,0.289198713839823,1.76922110389975,1.13236794963186,0.220841518460394,0,0,7.61230072230023,2.93225389538837,0.510914110417183,0.11981512450592,0,0.254140454146129,6.44099749440738,1.83000241127451,3.76963056338593,3.47648640384553,3.06858548796397,3.94797284663164,3.40706652442291,1.83310854930569,1.11966273549084,2.27450482590307,1.47309299120532,3.3831315170303,1.37941262660084,3.96136685571768,3.0140963567143,4.69451844144162,4.48398020996974,4.02917415606834,1.81092359517311,2.58681591519411,2.45837904218165,5.27853372491847,3.5071317188412,1.94633074457919,2.089512999133,2.05782136407943,2.7864797354589,0,0,0,2.27838349789052,1.40715635988658,1.44049649168812,4.02466050494857,2.36117078096885,1.23413690309903,1.62773761325285,2.41446061259657,1.5179494507732,1.97471819896177,0.164167464079095,0.729619285912702,1.16959989940266,1.3173006917463,1.07365135008297,1.47202963994889,3.39585220851639,0.991256348951394,0,1.91959425481711,2.09013004674395,1.41754207454303,1.4117846723634,1.77902435075896,0.570676878337677,0.474529061544512,0.658795818896044,0.502670417600539,0.596869416123452,0,0,0.216138049874694,0,1.32767530667157,1.5994791765362,1.1270773567308,2.44381593414377,2.90928730751439,1.75339549725796,2.15004226222475,1.32849133181642,0.784993639206874,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,2.21703828199926,1.13694847062291,1.95557971730431,1.35796068620151,4.22442446919304,3.51763140627813,3.33261097240419,1.75620283072019,1.41871629695572,1.32878813789265,1.91345722388985,1.63863314715738,1.38147985492716,2.02508682014116,0,0,0.983528546038072,3.03530420935206,4.65596710964597,2.81308047821288,0,0.252470927204373,3.78609863299508,1.17131623288992,2.15423397732799,3.58453196928828,3.11918143715352,3.67999490025482,1.61924280669958,1.75353514746787,2.37172666767914,4.81981974632711,3.40656204499845,1.78065603667255,1.95464351224291,1.15479086080775,0,2.42780636154981,1.209294227859,1.88605079755898,1.47650946440386,0.922305443831782,1.03371317267288,0.727067458955011,1.42598951353889,1.8962205476149,0,0,5.7874732978144,1.98067203434441,4.52755393239641,3.42939256050548,3.3694644392032,3.38900753443934,3.62007845324666,2.74018454203139,0.704015124191131,0.42366414172764,0.882113592219848,0.98931751764888,0.322928853391811,0.784068024066026,0.835606408021955,0.656563598980245,0,3.33765543618917,0.341741761595705,2.27025554759545,0.925972636848558,0.188368457004691,0,0.228778173206523,0.169978429993855,0.279902904647316,0.276399947608848,0,1.73984796469624,2.03319467126849,1.29606408986162,1.25452977608681,0,2.02296519577231,0.991841468704031,0.26175594198403,0.388844919875379,1.86401793926078,4.50954350947352,2.24274819065968,1.65458490457098,3.69457257853691,1.93739735216597,2.53434188236167,1.76035857968631,2.0832701575032,1.78260885523708,7.00593950395418,3.45636007509439,0,1.01362607645082,0.308132871494482,0.25984164595559,0.537080087002444,0.198681354781265,0,0.295379054349154,0.100966449948148,0.304827226619999,0.403304740547362,0,0.0962118416403295,0,1.36038230169127,0.665957860122194,0,0.503653849092235,1.9318959403219,0.93841237725591,0.549454872801795,1.2862102744744,2.00628841614145,3.3885110557024,4.60325236507177,5.72895513439397,5.32744865265431,2.74033007908257,0,2.70009000092722,2.2516060161211,1.35942722695261,4.14208249401456,1.66059756134683,2.39414924040619,2.56100408631201,2.91728060481953,2.72497111416377,2.20612210140017,2.22246727801615,2.47242068686673,2.24643446714271,2.27427490587418,2.5347929989024,0.754505365544305,2.52832070168682,1.85672941974121,2.1825478203133,4.28664322154766,2.78122382267653,1.54327376370964,3.29668720642645,2.06078488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| ||
|short_description=p1@Ppp1r26 | |||
}} | }} |
Latest revision as of 11:56, 26 September 2015
Short description: | p1@Ppp1r26 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppp1r26_5end |
Coexpression cluster: | MCL_coexpression_mm9:1187 |
Association with transcript: | 0bp_to_ENSMUST00000150362_5end |
EntrezGene: | Ppp1r26 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.44e-14 | 33 |
neuronal stem cell | 3.44e-14 | 33 |
neuroblast | 3.44e-14 | 33 |
electrically signaling cell | 3.44e-14 | 33 |
CNS neuron (sensu Vertebrata) | 7.14e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.14e-13 | 23 |
electrically responsive cell | 1.35e-09 | 39 |
electrically active cell | 1.35e-09 | 39 |
ectodermal cell | 1.62e-09 | 44 |
neurectodermal cell | 1.62e-09 | 44 |
neural cell | 3.76e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.85e-23 | 73 |
neurectoderm | 3.57e-22 | 64 |
neural plate | 3.57e-22 | 64 |
presumptive neural plate | 3.57e-22 | 64 |
nervous system | 9.29e-22 | 75 |
ectoderm-derived structure | 2.64e-21 | 95 |
ectoderm | 2.64e-21 | 95 |
presumptive ectoderm | 2.64e-21 | 95 |
structure with developmental contribution from neural crest | 1.32e-19 | 92 |
regional part of nervous system | 1.53e-19 | 54 |
neural tube | 1.34e-18 | 52 |
neural rod | 1.34e-18 | 52 |
future spinal cord | 1.34e-18 | 52 |
neural keel | 1.34e-18 | 52 |
ecto-epithelium | 1.35e-18 | 73 |
pre-chordal neural plate | 4.09e-17 | 49 |
brain | 2.38e-15 | 47 |
future brain | 2.38e-15 | 47 |
regional part of brain | 1.02e-14 | 46 |
anterior neural tube | 2.94e-14 | 40 |
regional part of forebrain | 1.39e-13 | 39 |
forebrain | 1.39e-13 | 39 |
future forebrain | 1.39e-13 | 39 |
gray matter | 1.82e-12 | 34 |
brain grey matter | 3.01e-09 | 29 |
regional part of telencephalon | 3.01e-09 | 29 |
telencephalon | 3.01e-09 | 29 |
embryo | 1.55e-07 | 320 |
anatomical conduit | 3.19e-07 | 122 |
tube | 8.02e-07 | 114 |