FFCP PHASE1:Mm9::chr2:164860321..164860359,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:164860321..164860359,-
|short_description=p2@Ncoa5
|description=CAGE_peak_2_at_Ncoa5_5end
|association_with_transcript=0bp_to_ENSMUST00000153905_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=228869 | |EntrezGene=228869 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=735 | |||
|TSSclassifier=NA | |||
|UniProt=A2A5L3 | |UniProt=A2A5L3 | ||
|association_with_transcript=0bp_to_ENSMUST00000153905_5end | |||
|cluster_id=chr2:164860321..164860359,- | |||
|description=CAGE_peak_2_at_Ncoa5_5end | |||
|id=chr2:164860321..164860359,- | |||
|ontology_enrichment_celltype=CL:0000540!3.27e-12!33;CL:0000047!3.27e-12!33;CL:0000031!3.27e-12!33;CL:0000404!3.27e-12!33;CL:0002319!6.42e-11!43;CL:0000221!2.18e-10!44;CL:0000133!2.18e-10!44;CL:0000117!1.06e-08!23;CL:0000337!1.06e-08!23;CL:0000393!1.71e-08!39;CL:0000211!1.71e-08!39;CL:0000055!2.92e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.27e-12,33;CL:0000047,3.27e-12,33;CL:0000031,3.27e-12,33;CL:0000404,3.27e-12,33;CL:0002319,6.42e-11,43;CL:0000221,2.18e-10,44;CL:0000133,2.18e-10,44;CL:0000117,1.06e-08,23;CL:0000337,1.06e-08,23;CL:0000393,1.71e-08,39;CL:0000211,1.71e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.43e-18,73;UBERON:0001016,1.86e-17,75;UBERON:0002346,5.23e-15,64;UBERON:0003075,5.23e-15,64;UBERON:0007284,5.23e-15,64;UBERON:0004121,2.16e-14,95;UBERON:0000924,2.16e-14,95;UBERON:0006601,2.16e-14,95;UBERON:0000073,2.85e-12,54;UBERON:0001049,4.87e-12,52;UBERON:0005068,4.87e-12,52;UBERON:0006241,4.87e-12,52;UBERON:0007135,4.87e-12,52;UBERON:0010371,1.32e-11,73;UBERON:0000955,2.60e-10,47;UBERON:0006238,2.60e-10,47;UBERON:0003056,3.18e-10,49;UBERON:0002616,4.72e-10,46;UBERON:0002020,1.45e-09,34;UBERON:0003080,1.55e-08,40;UBERON:0002780,3.02e-08,39;UBERON:0001890,3.02e-08,39;UBERON:0006240,3.02e-08,39;UBERON:0003528,1.10e-07,29;UBERON:0002791,1.10e-07,29;UBERON:0001893,1.10e-07,29;UBERON:0010314,1.10e-07,92;UBERON:0000956,4.16e-07,21;UBERON:0001869,4.16e-07,21;UBERON:0000203,4.16e-07,21 | |||
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| ||
|short_description=p2@Ncoa5 | |||
}} | }} |
Latest revision as of 04:00, 26 September 2015
Short description: | p2@Ncoa5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ncoa5_5end |
Coexpression cluster: | MCL_coexpression_mm9:735 |
Association with transcript: | 0bp_to_ENSMUST00000153905_5end |
EntrezGene: | Ncoa5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.27e-12 | 33 |
neuronal stem cell | 3.27e-12 | 33 |
neuroblast | 3.27e-12 | 33 |
electrically signaling cell | 3.27e-12 | 33 |
neural cell | 6.42e-11 | 43 |
ectodermal cell | 2.18e-10 | 44 |
neurectodermal cell | 2.18e-10 | 44 |
CNS neuron (sensu Vertebrata) | 1.06e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-08 | 23 |
electrically responsive cell | 1.71e-08 | 39 |
electrically active cell | 1.71e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.43e-18 | 73 |
nervous system | 1.86e-17 | 75 |
neurectoderm | 5.23e-15 | 64 |
neural plate | 5.23e-15 | 64 |
presumptive neural plate | 5.23e-15 | 64 |
ectoderm-derived structure | 2.16e-14 | 95 |
ectoderm | 2.16e-14 | 95 |
presumptive ectoderm | 2.16e-14 | 95 |
regional part of nervous system | 2.85e-12 | 54 |
neural tube | 4.87e-12 | 52 |
neural rod | 4.87e-12 | 52 |
future spinal cord | 4.87e-12 | 52 |
neural keel | 4.87e-12 | 52 |
ecto-epithelium | 1.32e-11 | 73 |
brain | 2.60e-10 | 47 |
future brain | 2.60e-10 | 47 |
pre-chordal neural plate | 3.18e-10 | 49 |
regional part of brain | 4.72e-10 | 46 |
gray matter | 1.45e-09 | 34 |
anterior neural tube | 1.55e-08 | 40 |
regional part of forebrain | 3.02e-08 | 39 |
forebrain | 3.02e-08 | 39 |
future forebrain | 3.02e-08 | 39 |
brain grey matter | 1.10e-07 | 29 |
regional part of telencephalon | 1.10e-07 | 29 |
telencephalon | 1.10e-07 | 29 |
structure with developmental contribution from neural crest | 1.10e-07 | 92 |
cerebral cortex | 4.16e-07 | 21 |
cerebral hemisphere | 4.16e-07 | 21 |
pallium | 4.16e-07 | 21 |