FFCP PHASE2:Hg19::chr3:33759668..33759688,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23122 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:17078 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17078 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B2RTR1,O75122 | ||
|association_with_transcript=16bp_to_NM_015097_5end | |association_with_transcript=16bp_to_NM_015097_5end | ||
|cluster_id=chr3:33759668..33759688,- | |cluster_id=chr3:33759668..33759688,- |
Latest revision as of 00:30, 18 September 2015
Short description: | p6@CLASP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CLASP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_NM_015097_5end |
EntrezGene: | CLASP2 |
HGNC: | 17078 |
UniProt: | B2RTR1O75122 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@CLASP2 |
---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.97e-24 | 168 |
hematopoietic cell | 1.16e-22 | 177 |
hematopoietic oligopotent progenitor cell | 3.12e-22 | 161 |
hematopoietic multipotent progenitor cell | 3.12e-22 | 161 |
leukocyte | 1.88e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 2.89e-18 | 120 |
nongranular leukocyte | 1.82e-17 | 115 |
myeloid cell | 5.32e-15 | 108 |
common myeloid progenitor | 5.32e-15 | 108 |
granulocyte monocyte progenitor cell | 9.34e-13 | 67 |
Showing 1 to 10 of 24 entries
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.06e-12 | 108 |
hematopoietic system | 6.08e-12 | 98 |
blood island | 6.08e-12 | 98 |
immune system | 3.01e-11 | 93 |
bone marrow | 3.52e-10 | 76 |
bone element | 2.14e-09 | 82 |
skeletal element | 2.30e-07 | 90 |
Showing 1 to 7 of 7 entries