FFCP PHASE1:Mm9::chr2:124914407..124914414,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:124914407..124914414,-
|short_description=p3@Myef2
|description=CAGE_peak_3_at_Myef2_5end
|association_with_transcript=332bp_to_ENSMUST00000129945_5end
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17876 | |EntrezGene=17876 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=332bp_to_ENSMUST00000129945_5end | |||
|cluster_id=chr2:124914407..124914414,- | |||
|description=CAGE_peak_3_at_Myef2_5end | |||
|id=chr2:124914407..124914414,- | |||
|ontology_enrichment_celltype=CL:0000540!2.31e-11!33;CL:0000047!2.31e-11!33;CL:0000031!2.31e-11!33;CL:0000404!2.31e-11!33;CL:0000393!7.11e-11!39;CL:0000211!7.11e-11!39;CL:0000117!2.87e-08!23;CL:0000337!2.87e-08!23;CL:0000221!3.43e-07!44;CL:0000133!3.43e-07!44;CL:0002319!8.47e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.25e-11,33;CL:0000047,2.25e-11,33;CL:0000031,2.25e-11,33;CL:0000404,2.25e-11,33;CL:0000393,6.95e-11,39;CL:0000211,6.95e-11,39;CL:0000117,2.82e-08,23;CL:0000337,2.82e-08,23;CL:0000221,3.46e-07,44;CL:0000133,3.46e-07,44;CL:0002319,8.54e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.77e-09!71;UBERON:0003075!3.77e-09!71;UBERON:0007284!3.77e-09!71;UBERON:0000073!7.72e-09!75;UBERON:0001016!7.72e-09!75;UBERON:0001017!5.05e-08!73;UBERON:0005743!5.05e-08!73;UBERON:0004121!8.55e-08!102;UBERON:0000924!8.55e-08!102;UBERON:0006601!8.55e-08!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.73e-09,92;UBERON:0002346,6.97e-09,64;UBERON:0003075,6.97e-09,64;UBERON:0007284,6.97e-09,64;UBERON:0001016,7.74e-09,75;UBERON:0001017,5.06e-08,73;UBERON:0004121,2.52e-07,95;UBERON:0000924,2.52e-07,95;UBERON:0006601,2.52e-07,95;UBERON:0010371,4.03e-07,73 | |||
|phase1_expression=12.9720566154883,0,0.454999239389536,0,0,1.00727563147134,1.16806320297763,2.1950964985068,3.09735188733667,1.40438715793196,2.73948749160808,2.71225340584144,1.19840510951844,1.74840804837995,2.6648780945253,4.656931149966,4.89693314689703,2.05050407482854,2.60517423850904,2.12194825899015,5.6128571499706,7.54611229126728,5.22399578277871,1.91990907352088,1.83527424853736,1.72269589234506,0.430761996159075,1.72376986148711,0.950117097281869,1.26015064879965,3.76941868114018,0.635030673459631,0,0,2.59966457776147,4.15586613396231,3.47087905646027,0.418531630736908,1.5626706890476,0.523523743973798,0,0,0,5.79125362687656,4.8660926985367,4.22157529971868,0.782391344348039,1.30815093828268,1.31811709640683,1.1665793944457,1.95980990275508,0,1.00669563634642,1.45072428402269,0.672187598284928,9.00408026125814,6.30373567865265,2.57836046138721,9.1042407386819,15.869729378161,4.43681982454325,0.338844532069132,1.77858959222228,0,0,2.1314403448383,1.49800055259202,2.30530983192933,26.4408511386618,18.2258016747782,24.3976955167603,5.42736870367227,7.06779331045163,14.8213867050094,12.4599112323707,6.43453150627015,3.30347642998166,6.00130489000382,7.52672012955593,8.70449499019279,8.87430142943374,15.6274011167028,5.02529398202486,8.4414391504752,9.47349136216223,23.5702868378934,22.4947255662583,19.199142920006,15.7510482133023,12.6204505378332,1.44932244350839,0,1.3599426674155,3.2382191498269,1.29955283489534,0.448026887097336,1.54488862144927,8.35108580632483,12.7295142255406,6.00677276667578,12.3942209403479,6.41632387071589,0,0,22.2985772241551,18.2419103142071,14.6602089054287,2.39786147410026,0.258937883647172,1.63286352971307,9.36820764537134,6.39377504455497,7.14908041493781,6.93324146542064,5.40908052824242,3.01599819191221,0.741584903203122,0.86759614151947,1.76922110389975,3.88240439873782,4.85851340612866,3.39412677194655,0,10.2473278954042,8.58731497935166,1.02182822083437,2.87556298814209,0.599902730993408,2.28726408731516,4.49371918214468,2.28750301409313,16.2094114225595,4.34560800480691,8.95004100656157,4.36354893575076,3.24482526135515,6.31404055871961,3.11017426525233,2.0217820674694,2.31486041475121,11.840960309606,4.82794419310293,5.58192602396583,14.4676625122286,11.0899493616664,17.5515796790244,12.6497328155634,5.43277078551933,3.88022387279116,4.34943984385984,5.80638709741031,6.79506770525482,9.73165372289593,3.83077383174383,5.55611768301447,11.7430217422911,0.702213187313235,0.772043721344145,1.13665399758237,5.38527008592305,11.7263029990548,6.66229627405755,1.65721314909647,4.72234156193769,6.78775296704464,6.97601834251224,6.70683503499048,3.73649095574942,3.45575684818309,7.71587081171748,1.78351381000883,2.63159977365598,2.63460138349261,1.8788898626452,2.73376933133365,14.5095503454791,0,0,11.3042772783674,15.5598570146494,3.60828891701861,3.83198696784351,2.44615848229357,2.28270751335071,2.84717436926707,1.64698954724011,3.51869292320377,3.97912944082302,2.33956904542944,1.79763881730844,3.24207074812041,2.98711909881551,2.0863469104839,10.2823661348756,7.88954149711563,8.96065842519383,9.50367187121366,6.10181633045771,5.31186911843761,3.24742325555125,5.18095801876537,3.20832626196681,0.592905254174298,3.17005700860579,1.96558995113203,5.8464149220062,2.02860121388503,3.85883455603867,4.58326533206556,1.43848068725405,2.91843408195064,4.66754402419738,11.5014565221884,4.09355042435354,5.30464044294753,1.26289438973556,2.69096120282868,1.4473305640901,2.58654466233247,4.9267767060326,6.68156403412306,8.82674446030978,11.0304416695596,3.68513766371995,2.38043640886014,5.07347484430277,6.30540576424764,9.30151696524855,6.05928120898451,4.7520361267564,5.00786447411097,3.90552458170081,3.01582567878545,2.17562273527484,0.983528546038072,1.37968373152366,5.45872005958493,6.32943107597897,6.22952792431367,3.28212205365685,12.9358369960665,10.5418460960092,10.3403230911743,7.40803273652911,7.5751549188014,3.39691836946599,10.1202675418724,12.8592577480977,7.90575555893047,6.10510501201433,1.98716119291576,5.69809931735217,3.90928702448583,1.64970122972535,1.32745138339963,5.82673526771955,7.86041248108353,6.03536255218874,0.885905678642318,1.84461088766356,5.16856586336442,8.36127577798263,8.19943970284859,4.10847785316561,7.37930260024991,2.06271086496374,9.87274856685985,11.3438489239725,5.56242340265844,10.0738406464848,10.4630737848941,9.45354733290974,11.3538824215463,4.56697423671899,1.17335854031855,1.48282449604674,0.220528398054962,0.65954501176592,3.71368181400583,2.47282992205439,3.81991500810037,1.47726809770555,2.33184669303881,2.96680483216816,3.75915937755276,6.81076664278634,6.2966139305702,8.66494902221579,7.65487675237741,10.066239621087,1.5298058699447,1.6794174278839,0.967399816630967,4.77335309007557,5.53587988766987,4.26970880966382,7.66837919834789,6.89991376847747,6.55087691238533,5.25970950900801,4.3806331534428,1.04702376793612,2.59229946583586,1.86401793926078,20.2929457926309,12.8584229597822,13.4021377270249,12.6393272423631,13.0451421712508,18.5851738039856,16.7820851263428,11.8485990207995,8.38874755405687,28.2653421366427,28.8030006257865,1.89606672376907,6.28448167399509,7.80603274452687,6.75588279484534,3.22248052201467,2.18549490259391,6.73094517311826,7.08909730437971,6.96668504642219,7.31585343887998,8.67105192176829,6.72459377104292,6.63861707318273,5.61009130471531,0.226730383615211,1.55390167361845,8.25367480807176,3.52557694364565,1.35232715822533,2.25218970541418,1.28206136987086,1.50057865355346,5.01572104035363,4.51801474093653,3.68260189205742,5.15605962095457,11.1704568523397,2.05524755931193,4.5323633843382,4.72515750162264,4.5032120322422,5.43770890781046,4.14208249401456,16.7097629610524,2.79317411380722,5.80494259564056,4.86213434136588,5.24032906569956,3.67687016900028,3.55594764482584,5.97501665992793,3.20919209591815,3.03236654116557,4.81610669791456,5.28153755881013,7.02311306024118,4.41773551593598,5.57124048869449,1.90517476513229,4.86714168968393,7.13764115715709,2.47251540481984,2.50238164228475,7.54312355247914,4.79184676630211,7.15308569841963,6.39524233182245,6.7758753899038,8.630690004951,6.40247905054704,5.26139422875686,6.24698923690964,2.24456908663095,3.32178050747688,5.51625101303155,1.22769312950907,5.57772628269478,3.47231899766054,3.49734809113124,3.27504251823572,2.36358159453128,2.67803664896381,1.76473135295612,0.695603506861264 | |phase1_expression=12.9720566154883,0,0.454999239389536,0,0,1.00727563147134,1.16806320297763,2.1950964985068,3.09735188733667,1.40438715793196,2.73948749160808,2.71225340584144,1.19840510951844,1.74840804837995,2.6648780945253,4.656931149966,4.89693314689703,2.05050407482854,2.60517423850904,2.12194825899015,5.6128571499706,7.54611229126728,5.22399578277871,1.91990907352088,1.83527424853736,1.72269589234506,0.430761996159075,1.72376986148711,0.950117097281869,1.26015064879965,3.76941868114018,0.635030673459631,0,0,2.59966457776147,4.15586613396231,3.47087905646027,0.418531630736908,1.5626706890476,0.523523743973798,0,0,0,5.79125362687656,4.8660926985367,4.22157529971868,0.782391344348039,1.30815093828268,1.31811709640683,1.1665793944457,1.95980990275508,0,1.00669563634642,1.45072428402269,0.672187598284928,9.00408026125814,6.30373567865265,2.57836046138721,9.1042407386819,15.869729378161,4.43681982454325,0.338844532069132,1.77858959222228,0,0,2.1314403448383,1.49800055259202,2.30530983192933,26.4408511386618,18.2258016747782,24.3976955167603,5.42736870367227,7.06779331045163,14.8213867050094,12.4599112323707,6.43453150627015,3.30347642998166,6.00130489000382,7.52672012955593,8.70449499019279,8.87430142943374,15.6274011167028,5.02529398202486,8.4414391504752,9.47349136216223,23.5702868378934,22.4947255662583,19.199142920006,15.7510482133023,12.6204505378332,1.44932244350839,0,1.3599426674155,3.2382191498269,1.29955283489534,0.448026887097336,1.54488862144927,8.35108580632483,12.7295142255406,6.00677276667578,12.3942209403479,6.41632387071589,0,0,22.2985772241551,18.2419103142071,14.6602089054287,2.39786147410026,0.258937883647172,1.63286352971307,9.36820764537134,6.39377504455497,7.14908041493781,6.93324146542064,5.40908052824242,3.01599819191221,0.741584903203122,0.86759614151947,1.76922110389975,3.88240439873782,4.85851340612866,3.39412677194655,0,10.2473278954042,8.58731497935166,1.02182822083437,2.87556298814209,0.599902730993408,2.28726408731516,4.49371918214468,2.28750301409313,16.2094114225595,4.34560800480691,8.95004100656157,4.36354893575076,3.24482526135515,6.31404055871961,3.11017426525233,2.0217820674694,2.31486041475121,11.840960309606,4.82794419310293,5.58192602396583,14.4676625122286,11.0899493616664,17.5515796790244,12.6497328155634,5.43277078551933,3.88022387279116,4.34943984385984,5.80638709741031,6.79506770525482,9.73165372289593,3.83077383174383,5.55611768301447,11.7430217422911,0.702213187313235,0.772043721344145,1.13665399758237,5.38527008592305,11.7263029990548,6.66229627405755,1.65721314909647,4.72234156193769,6.78775296704464,6.97601834251224,6.70683503499048,3.73649095574942,3.45575684818309,7.71587081171748,1.78351381000883,2.63159977365598,2.63460138349261,1.8788898626452,2.73376933133365,14.5095503454791,0,0,11.3042772783674,15.5598570146494,3.60828891701861,3.83198696784351,2.44615848229357,2.28270751335071,2.84717436926707,1.64698954724011,3.51869292320377,3.97912944082302,2.33956904542944,1.79763881730844,3.24207074812041,2.98711909881551,2.0863469104839,10.2823661348756,7.88954149711563,8.96065842519383,9.50367187121366,6.10181633045771,5.31186911843761,3.24742325555125,5.18095801876537,3.20832626196681,0.592905254174298,3.17005700860579,1.96558995113203,5.8464149220062,2.02860121388503,3.85883455603867,4.58326533206556,1.43848068725405,2.91843408195064,4.66754402419738,11.5014565221884,4.09355042435354,5.30464044294753,1.26289438973556,2.69096120282868,1.4473305640901,2.58654466233247,4.9267767060326,6.68156403412306,8.82674446030978,11.0304416695596,3.68513766371995,2.38043640886014,5.07347484430277,6.30540576424764,9.30151696524855,6.05928120898451,4.7520361267564,5.00786447411097,3.90552458170081,3.01582567878545,2.17562273527484,0.983528546038072,1.37968373152366,5.45872005958493,6.32943107597897,6.22952792431367,3.28212205365685,12.9358369960665,10.5418460960092,10.3403230911743,7.40803273652911,7.5751549188014,3.39691836946599,10.1202675418724,12.8592577480977,7.90575555893047,6.10510501201433,1.98716119291576,5.69809931735217,3.90928702448583,1.64970122972535,1.32745138339963,5.82673526771955,7.86041248108353,6.03536255218874,0.885905678642318,1.84461088766356,5.16856586336442,8.36127577798263,8.19943970284859,4.10847785316561,7.37930260024991,2.06271086496374,9.87274856685985,11.3438489239725,5.56242340265844,10.0738406464848,10.4630737848941,9.45354733290974,11.3538824215463,4.56697423671899,1.17335854031855,1.48282449604674,0.220528398054962,0.65954501176592,3.71368181400583,2.47282992205439,3.81991500810037,1.47726809770555,2.33184669303881,2.96680483216816,3.75915937755276,6.81076664278634,6.2966139305702,8.66494902221579,7.65487675237741,10.066239621087,1.5298058699447,1.6794174278839,0.967399816630967,4.77335309007557,5.53587988766987,4.26970880966382,7.66837919834789,6.89991376847747,6.55087691238533,5.25970950900801,4.3806331534428,1.04702376793612,2.59229946583586,1.86401793926078,20.2929457926309,12.8584229597822,13.4021377270249,12.6393272423631,13.0451421712508,18.5851738039856,16.7820851263428,11.8485990207995,8.38874755405687,28.2653421366427,28.8030006257865,1.89606672376907,6.28448167399509,7.80603274452687,6.75588279484534,3.22248052201467,2.18549490259391,6.73094517311826,7.08909730437971,6.96668504642219,7.31585343887998,8.67105192176829,6.72459377104292,6.63861707318273,5.61009130471531,0.226730383615211,1.55390167361845,8.25367480807176,3.52557694364565,1.35232715822533,2.25218970541418,1.28206136987086,1.50057865355346,5.01572104035363,4.51801474093653,3.68260189205742,5.15605962095457,11.1704568523397,2.05524755931193,4.5323633843382,4.72515750162264,4.5032120322422,5.43770890781046,4.14208249401456,16.7097629610524,2.79317411380722,5.80494259564056,4.86213434136588,5.24032906569956,3.67687016900028,3.55594764482584,5.97501665992793,3.20919209591815,3.03236654116557,4.81610669791456,5.28153755881013,7.02311306024118,4.41773551593598,5.57124048869449,1.90517476513229,4.86714168968393,7.13764115715709,2.47251540481984,2.50238164228475,7.54312355247914,4.79184676630211,7.15308569841963,6.39524233182245,6.7758753899038,8.630690004951,6.40247905054704,5.26139422875686,6.24698923690964,2.24456908663095,3.32178050747688,5.51625101303155,1.22769312950907,5.57772628269478,3.47231899766054,3.49734809113124,3.27504251823572,2.36358159453128,2.67803664896381,1.76473135295612,0.695603506861264 | ||
|short_description=p3@Myef2 | |||
}} | }} |
Latest revision as of 15:37, 25 September 2015
Short description: | p3@Myef2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Myef2_5end |
Coexpression cluster: | NA |
Association with transcript: | 332bp_to_ENSMUST00000129945_5end |
EntrezGene: | Myef2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.25e-11 | 33 |
neuronal stem cell | 2.25e-11 | 33 |
neuroblast | 2.25e-11 | 33 |
electrically signaling cell | 2.25e-11 | 33 |
electrically responsive cell | 6.95e-11 | 39 |
electrically active cell | 6.95e-11 | 39 |
CNS neuron (sensu Vertebrata) | 2.82e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.82e-08 | 23 |
ectodermal cell | 3.46e-07 | 44 |
neurectodermal cell | 3.46e-07 | 44 |
neural cell | 8.54e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.73e-09 | 92 |
neurectoderm | 6.97e-09 | 64 |
neural plate | 6.97e-09 | 64 |
presumptive neural plate | 6.97e-09 | 64 |
nervous system | 7.74e-09 | 75 |
central nervous system | 5.06e-08 | 73 |
ectoderm-derived structure | 2.52e-07 | 95 |
ectoderm | 2.52e-07 | 95 |
presumptive ectoderm | 2.52e-07 | 95 |
ecto-epithelium | 4.03e-07 | 73 |