FFCP PHASE1:Mm9::chr1:23389968..23389985,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:23389968..23389985,-
|short_description=p2@Ogfrl1
|description=CAGE_peak_2_at_Ogfrl1_5end
|association_with_transcript=28bp_to_ENSMUST00000027343,NM_001081...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70155 | |EntrezGene=70155 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VE52 | |UniProt=Q8VE52 | ||
|association_with_transcript=28bp_to_ENSMUST00000027343,NM_001081079,uc007amb.1_5end | |||
|cluster_id=chr1:23389968..23389985,- | |||
|description=CAGE_peak_2_at_Ogfrl1_5end | |||
|id=chr1:23389968..23389985,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.81e-11!122;UBERON:0000025!1.78e-10!114;UBERON:0000033!6.05e-09!63;UBERON:0000475!9.47e-09!200;UBERON:0000955!5.57e-08!50;UBERON:0006238!5.57e-08!50;UBERON:0002021!6.63e-08!10;UBERON:0000411!6.63e-08!10;UBERON:0001950!6.63e-08!10;UBERON:0001049!8.30e-08!52;UBERON:0005068!8.30e-08!52;UBERON:0006241!8.30e-08!52;UBERON:0007135!8.30e-08!52;UBERON:0002616!1.59e-07!49;UBERON:0002346!3.22e-07!71;UBERON:0003075!3.22e-07!71;UBERON:0007284!3.22e-07!71;UBERON:0000477!4.51e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.40e-14,54;UBERON:0001049,3.55e-12,52;UBERON:0005068,3.55e-12,52;UBERON:0006241,3.55e-12,52;UBERON:0007135,3.55e-12,52;UBERON:0002346,7.68e-12,64;UBERON:0003075,7.68e-12,64;UBERON:0007284,7.68e-12,64;UBERON:0002021,2.27e-11,10;UBERON:0000411,2.27e-11,10;UBERON:0001950,2.27e-11,10;UBERON:0010371,2.56e-11,73;UBERON:0000955,3.57e-10,47;UBERON:0006238,3.57e-10,47;UBERON:0001017,3.73e-10,73;UBERON:0004121,4.97e-10,95;UBERON:0000924,4.97e-10,95;UBERON:0006601,4.97e-10,95;UBERON:0002020,5.60e-10,34;UBERON:0001016,1.49e-09,75;UBERON:0002616,1.70e-09,46;UBERON:0004111,9.73e-09,122;UBERON:0000025,1.02e-08,114;UBERON:0003056,5.89e-08,49;UBERON:0003528,6.61e-08,29;UBERON:0002791,6.61e-08,29;UBERON:0001893,6.61e-08,29;UBERON:0003080,6.61e-08,40;UBERON:0002619,1.84e-07,17;UBERON:0002780,2.44e-07,39;UBERON:0001890,2.44e-07,39;UBERON:0006240,2.44e-07,39;UBERON:0010314,4.71e-07,92 | |||
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| ||
|short_description=p2@Ogfrl1 | |||
}} | }} |
Latest revision as of 01:15, 27 September 2015
Short description: | p2@Ogfrl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ogfrl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 28bp_to_ENSMUST00000027343, NM_001081079, uc007amb.1_5end |
EntrezGene: | Ogfrl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.40e-14 | 54 |
neural tube | 3.55e-12 | 52 |
neural rod | 3.55e-12 | 52 |
future spinal cord | 3.55e-12 | 52 |
neural keel | 3.55e-12 | 52 |
neurectoderm | 7.68e-12 | 64 |
neural plate | 7.68e-12 | 64 |
presumptive neural plate | 7.68e-12 | 64 |
occipital lobe | 2.27e-11 | 10 |
visual cortex | 2.27e-11 | 10 |
neocortex | 2.27e-11 | 10 |
ecto-epithelium | 2.56e-11 | 73 |
brain | 3.57e-10 | 47 |
future brain | 3.57e-10 | 47 |
central nervous system | 3.73e-10 | 73 |
ectoderm-derived structure | 4.97e-10 | 95 |
ectoderm | 4.97e-10 | 95 |
presumptive ectoderm | 4.97e-10 | 95 |
gray matter | 5.60e-10 | 34 |
nervous system | 1.49e-09 | 75 |
regional part of brain | 1.70e-09 | 46 |
anatomical conduit | 9.73e-09 | 122 |
tube | 1.02e-08 | 114 |
pre-chordal neural plate | 5.89e-08 | 49 |
brain grey matter | 6.61e-08 | 29 |
regional part of telencephalon | 6.61e-08 | 29 |
telencephalon | 6.61e-08 | 29 |
anterior neural tube | 6.61e-08 | 40 |
regional part of cerebral cortex | 1.84e-07 | 17 |
regional part of forebrain | 2.44e-07 | 39 |
forebrain | 2.44e-07 | 39 |
future forebrain | 2.44e-07 | 39 |
structure with developmental contribution from neural crest | 4.71e-07 | 92 |