FFCP PHASE1:Mm9::chr1:189039427..189039438,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:189039427..189039438,+
|short_description=p2@Gpatch2
|description=CAGE_peak_2_at_Gpatch2_5end
|association_with_transcript=2bp_to_ENSMUST00000159748_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67769 | |EntrezGene=67769 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENSMUST00000159748_5end | |||
|cluster_id=chr1:189039427..189039438,+ | |||
|description=CAGE_peak_2_at_Gpatch2_5end | |||
|id=chr1:189039427..189039438,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,1.57e-07,7;CL:0000066,2.64e-07,25;CL:0002563,2.69e-07,9;CL:0002251,2.69e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.69e-07,9;UBERON:0004808,2.69e-07,9;UBERON:0001277,2.69e-07,9;UBERON:0000485,3.96e-07,11 | |||
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| ||
|short_description=p2@Gpatch2 | |||
}} | }} |
Latest revision as of 23:27, 26 September 2015
Short description: | p2@Gpatch2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gpatch2_5end |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | 2bp_to_ENSMUST00000159748_5end |
EntrezGene: | Gpatch2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 1.57e-07 | 7 |
epithelial cell | 2.64e-07 | 25 |
intestinal epithelial cell | 2.69e-07 | 9 |
epithelial cell of alimentary canal | 2.69e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.69e-07 | 9 |
gastrointestinal system epithelium | 2.69e-07 | 9 |
intestinal epithelium | 2.69e-07 | 9 |
simple columnar epithelium | 3.96e-07 | 11 |