FFCP PHASE1:Mm9::chr1:158296168..158296175,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:158296168..158296175,+
|short_description=p1@Gm2000,p2@Rpl35
|description=CAGE_peak_1_at_Gm2000_5end,CAGE_peak_2_at_Rpl35_5end
|association_with_transcript...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100038991,66489 | |EntrezGene=100038991,66489 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt=Q6ZWV7 | |UniProt=Q6ZWV7 | ||
|association_with_transcript=0bp_to_ENSMUST00000102782_5end | |||
|cluster_id=chr1:158296168..158296175,+ | |||
|description=CAGE_peak_1_at_Gm2000_5end,CAGE_peak_2_at_Rpl35_5end | |||
|id=chr1:158296168..158296175,+ | |||
|ontology_enrichment_celltype=CL:0002320!8.32e-14!46;CL:0000134!8.32e-14!46;CL:0000219!2.10e-13!54;CL:0000548!2.35e-12!115;CL:0000004!2.35e-12!115;CL:0000255!2.35e-12!115;CL:0002031!1.33e-11!25;CL:0002371!9.50e-11!118;CL:0000034!2.83e-10!97;CL:0000144!5.75e-10!121;CL:0000012!5.75e-10!121;CL:0000738!6.86e-10!17;CL:0002087!6.86e-10!17;CL:0000723!8.03e-10!91;CL:0000048!8.03e-10!91;CL:0000988!1.10e-09!32;CL:0002032!1.10e-09!32;CL:0000037!1.10e-09!32;CL:0000566!1.10e-09!32;CL:0000837!1.10e-09!32;CL:0000063!3.66e-09!66;CL:0000838!3.28e-08!12;CL:0000542!8.46e-08!13;CL:0000051!8.46e-08!13;CL:0000084!1.47e-07!11;CL:0000827!1.47e-07!11;CL:0000791!7.21e-07!9;CL:0000789!7.21e-07!9;CL:0002420!7.21e-07!9;CL:0002419!7.21e-07!9;CL:0000790!7.21e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.91e-14,46;CL:0000134,1.91e-14,46;CL:0000219,9.42e-14,54;CL:0002031,4.58e-12,25;CL:0000034,4.33e-11,97;CL:0000723,1.40e-10,91;CL:0000048,1.40e-10,91;CL:0000988,3.22e-10,32;CL:0002032,3.22e-10,32;CL:0000037,3.22e-10,32;CL:0000837,3.22e-10,32;CL:0000738,4.51e-10,17;CL:0002087,4.51e-10,17;CL:0000838,2.34e-08,12;CL:0000542,6.17e-08,13;CL:0000051,6.17e-08,13;CL:0000084,1.09e-07,11;CL:0000827,1.09e-07,11;CL:0000791,5.51e-07,9;CL:0000789,5.51e-07,9;CL:0002420,5.51e-07,9;CL:0002419,5.51e-07,9;CL:0000790,5.51e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.32e-14!46;UBERON:0002193!6.01e-09!48;UBERON:0002390!6.13e-08!45;UBERON:0003061!6.13e-08!45;UBERON:0002405!1.49e-07!70;UBERON:0002371!8.09e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.91e-14,46;UBERON:0002193,3.00e-09,48;UBERON:0002405,3.00e-09,48;UBERON:0002390,3.26e-08,45;UBERON:0003061,3.26e-08,45;UBERON:0002371,3.73e-07,16 | |||
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| ||
|short_description=p1@Gm2000,p2@Rpl35 | |||
}} | }} |
Latest revision as of 14:56, 26 September 2015
Short description: | p1@Gm2000, p2@Rpl35 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm2000_5end, CAGE_peak_2_at_Rpl35_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | 0bp_to_ENSMUST00000102782_5end |
EntrezGene: | 100038991,66489 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.91e-14 | 46 |
mesenchymal cell | 1.91e-14 | 46 |
motile cell | 9.42e-14 | 54 |
hematopoietic lineage restricted progenitor cell | 4.58e-12 | 25 |
stem cell | 4.33e-11 | 97 |
somatic stem cell | 1.40e-10 | 91 |
multi fate stem cell | 1.40e-10 | 91 |
hematopoietic cell | 3.22e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.22e-10 | 32 |
hematopoietic stem cell | 3.22e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.22e-10 | 32 |
leukocyte | 4.51e-10 | 17 |
nongranular leukocyte | 4.51e-10 | 17 |
lymphoid lineage restricted progenitor cell | 2.34e-08 | 12 |
lymphocyte | 6.17e-08 | 13 |
common lymphoid progenitor | 6.17e-08 | 13 |
T cell | 1.09e-07 | 11 |
pro-T cell | 1.09e-07 | 11 |
mature alpha-beta T cell | 5.51e-07 | 9 |
alpha-beta T cell | 5.51e-07 | 9 |
immature T cell | 5.51e-07 | 9 |
mature T cell | 5.51e-07 | 9 |
immature alpha-beta T cell | 5.51e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.91e-14 | 46 |
hemolymphoid system | 3.00e-09 | 48 |
immune system | 3.00e-09 | 48 |
hematopoietic system | 3.26e-08 | 45 |
blood island | 3.26e-08 | 45 |
bone marrow | 3.73e-07 | 16 |