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FFCP PHASE1:Mm9::chr1:155500236..155500306,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:155500236..155500306,+
|DHSsupport=NA
|short_description=p1@Rgs8
|DPIdataset=NA
|description=CAGE_peak_1_at_Rgs8_5end
|association_with_transcript=69bp_to_NM_026380,uc007dad.1_5end
|EntrezGene=67792
|EntrezGene=67792
|HGNC=
|HGNC=
|MCL_coexpression_id=30
|TSSclassifier=NA
|UniProt=Q8BXT1
|UniProt=Q8BXT1
|association_with_transcript=69bp_to_NM_026380,uc007dad.1_5end
|cluster_id=chr1:155500236..155500306,+
|description=CAGE_peak_1_at_Rgs8_5end
|id=chr1:155500236..155500306,+
|ontology_enrichment_celltype=CL:0002319!5.56e-16!43;CL:0000221!3.96e-15!44;CL:0000133!3.96e-15!44;CL:0000117!2.83e-14!23;CL:0000337!2.83e-14!23;CL:0000540!4.80e-13!33;CL:0000047!4.80e-13!33;CL:0000031!4.80e-13!33;CL:0000404!4.80e-13!33;CL:0000055!1.63e-11!50;CL:0000393!2.93e-09!39;CL:0000211!2.93e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.34e-18,23;CL:0000337,7.34e-18,23;CL:0002319,4.43e-15,43;CL:0000221,1.94e-14,44;CL:0000133,1.94e-14,44;CL:0000540,5.22e-12,33;CL:0000047,5.22e-12,33;CL:0000031,5.22e-12,33;CL:0000404,5.22e-12,33;CL:0000393,1.07e-08,39;CL:0000211,1.07e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!9.41e-34!75;UBERON:0001016!9.41e-34!75;UBERON:0001017!2.56e-33!73;UBERON:0005743!2.56e-33!73;UBERON:0004121!1.33e-29!102;UBERON:0000924!1.33e-29!102;UBERON:0006601!1.33e-29!102;UBERON:0000033!7.88e-29!63;UBERON:0002346!1.98e-28!71;UBERON:0003075!1.98e-28!71;UBERON:0007284!1.98e-28!71;UBERON:0001049!3.27e-27!52;UBERON:0005068!3.27e-27!52;UBERON:0006241!3.27e-27!52;UBERON:0007135!3.27e-27!52;UBERON:0000955!8.19e-27!50;UBERON:0006238!8.19e-27!50;UBERON:0002616!2.66e-26!49;UBERON:0003056!3.71e-25!49;UBERON:0003080!1.98e-20!40;UBERON:0002020!3.81e-20!34;UBERON:0002780!1.01e-19!39;UBERON:0001890!1.01e-19!39;UBERON:0006240!1.01e-19!39;UBERON:0002791!1.80e-17!29;UBERON:0003528!1.80e-17!29;UBERON:0001893!1.80e-17!29;UBERON:0000153!1.77e-15!94;UBERON:0007811!1.29e-14!86;UBERON:0000956!1.88e-12!21;UBERON:0001869!1.88e-12!21;UBERON:0000203!1.88e-12!21;UBERON:0002619!1.98e-10!17;UBERON:0002021!9.32e-08!10;UBERON:0000411!9.32e-08!10;UBERON:0001950!9.32e-08!10;UBERON:0003076!2.92e-07!12;UBERON:0003057!2.92e-07!12;UBERON:0000025!9.84e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.18e-39,64;UBERON:0003075,2.18e-39,64;UBERON:0007284,2.18e-39,64;UBERON:0000073,2.65e-36,54;UBERON:0001017,2.66e-36,73;UBERON:0001016,4.57e-36,75;UBERON:0004121,1.44e-34,95;UBERON:0000924,1.44e-34,95;UBERON:0006601,1.44e-34,95;UBERON:0001049,1.10e-33,52;UBERON:0005068,1.10e-33,52;UBERON:0006241,1.10e-33,52;UBERON:0007135,1.10e-33,52;UBERON:0010371,1.38e-32,73;UBERON:0003056,4.65e-31,49;UBERON:0000955,4.87e-30,47;UBERON:0006238,4.87e-30,47;UBERON:0002616,2.14e-29,46;UBERON:0002020,2.13e-25,34;UBERON:0003080,5.30e-25,40;UBERON:0002780,4.20e-24,39;UBERON:0001890,4.20e-24,39;UBERON:0006240,4.20e-24,39;UBERON:0003528,5.79e-22,29;UBERON:0002791,5.79e-22,29;UBERON:0001893,5.79e-22,29;UBERON:0010314,8.23e-21,92;UBERON:0000956,1.60e-15,21;UBERON:0001869,1.60e-15,21;UBERON:0000203,1.60e-15,21;UBERON:0002619,6.26e-13,17;UBERON:0002021,1.65e-09,10;UBERON:0000411,1.65e-09,10;UBERON:0001950,1.65e-09,10;UBERON:0003076,7.12e-09,12;UBERON:0003057,7.12e-09,12;UBERON:0002420,1.36e-07,8;UBERON:0007245,1.36e-07,8;UBERON:0010009,1.36e-07,8;UBERON:0010011,1.36e-07,8;UBERON:0000454,1.36e-07,8;UBERON:0000025,2.37e-07,114
|phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,16.0731818385522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,39.0265029920999,8.5677611266444,1.94429899074283,4.4795654920116,34.5006154475932,0,0,0,0,0.573066879877513,0,34.7984312678508,48.667170093027,36.7622214033584,3.04960078862219,1.77858959222228,0,0,0,5.69240209984969,1.15265491596466,7.77672092313582,14.9856591548177,13.0401476037857,9.42648248532552,12.3686382932904,11.1466627285608,6.99671938433125,8.27296907949019,79.2834343195599,66.7804778185532,57.1416303713226,56.0516722853324,53.9777097254217,39.068502791757,49.136207824243,20.8222165711722,25.3645091309505,18.2669722993674,15.0913981647049,15.2847545576746,0.530083353332288,6.42358260907677,0.289864488701678,0,2.03991400112325,0,0,0,4.0728881838208,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0.258937883647172,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.352766121407114,0,0,0,0,0.485300549842228,0,0,1.86391761218122,409.893115816166,379.726879452794,0,0.11981512450592,0,0,43.8886573456131,36.6000482254901,11.5602003943835,40.848715245185,39.6358958862012,62.5442014124276,40.3980745038717,0.407357455401265,0,0,11.5743020737561,8.45782879257574,9.19608417733892,8.10279584124071,8.28876498096433,9.79725587779121,11.1458936647819,14.8985742049969,42.9447595426766,0.215567992932842,3.02569728268511,1.05570674498369,1.7535658594206,1.11218899690239,0.696504333044333,1.23469281844766,0,0,0,0,0.414251545071004,0.469052119962192,0,0.946978942340841,0.787056926989615,0,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,47.1049484783645,10.8049842998249,0,0,1.06644125267617,0.928946687441754,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.51593129416388,0.488894929326078,0.169745085775188,0,0.167506257441816,0.714130922658041,0.195133647857799,1.41871629695572,2.43611158613652,2.07291199254733,0,0,0,0,0,0,0,12.2018448390722,13.7137673312878,0,0,1.89304931649754,1.17131623288992,0.861693590931196,0.716906393857656,0.668396022247182,0,0.809621403349789,0.876767573733936,0.790575555893047,9.3183181762324,0,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0,0.727067458955011,0,0,0,0,6.46835250932197,4.14140516272013,3.10460841078611,1.28602221018955,0.354680467284547,1.96205699362278,1.64549020602121,1.8267896946876,0.704015124191131,0,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0.238744688006273,0.164140899745061,0,7.04616147639937,0,0.412773735926445,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.790839983952838,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.240390899039938,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0.167884616364078,0.19318959403219,0.375364950902364,0,0,0,37.2736216127264,38.6673198666029,30.363462212288,38.1514064802986,41.1049511862385,42.3020582538232,50.6266875173854,44.1314779159736,49.3925225792783,47.6339486811674,5.70830411712972,9.17757208822371,6.31714341290296,3.8897074730927,6.07878171621149,2.94149613520023,3.55594764482584,3.29656091582231,2.24643446714271,4.54854981174835,3.54871019846336,2.64076877940507,3.55837728385553,2.94515701062399,3.56099907524802,2.85776214769844,2.31768651889711,3.6652751888104,3.70877310722976,4.12156976376312,3.42869252385415,1.95223386775271,3.57654284920981,2.0348498328526,3.85848459702856,2.96151127620868,4.20734337607377,3.15683653725411,3.12349461845482,1.68342681497322,3.32178050747688,3.34915240076916,2.04615521584845,4.49316839439301,3.2794123866794,7.49431733813838,1.63752125911786,2.36358159453128,1.91288332068843,1.54413993383661,0.695603506861264
|phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,16.0731818385522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,39.0265029920999,8.5677611266444,1.94429899074283,4.4795654920116,34.5006154475932,0,0,0,0,0.573066879877513,0,34.7984312678508,48.667170093027,36.7622214033584,3.04960078862219,1.77858959222228,0,0,0,5.69240209984969,1.15265491596466,7.77672092313582,14.9856591548177,13.0401476037857,9.42648248532552,12.3686382932904,11.1466627285608,6.99671938433125,8.27296907949019,79.2834343195599,66.7804778185532,57.1416303713226,56.0516722853324,53.9777097254217,39.068502791757,49.136207824243,20.8222165711722,25.3645091309505,18.2669722993674,15.0913981647049,15.2847545576746,0.530083353332288,6.42358260907677,0.289864488701678,0,2.03991400112325,0,0,0,4.0728881838208,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0.258937883647172,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.352766121407114,0,0,0,0,0.485300549842228,0,0,1.86391761218122,409.893115816166,379.726879452794,0,0.11981512450592,0,0,43.8886573456131,36.6000482254901,11.5602003943835,40.848715245185,39.6358958862012,62.5442014124276,40.3980745038717,0.407357455401265,0,0,11.5743020737561,8.45782879257574,9.19608417733892,8.10279584124071,8.28876498096433,9.79725587779121,11.1458936647819,14.8985742049969,42.9447595426766,0.215567992932842,3.02569728268511,1.05570674498369,1.7535658594206,1.11218899690239,0.696504333044333,1.23469281844766,0,0,0,0,0.414251545071004,0.469052119962192,0,0.946978942340841,0.787056926989615,0,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,47.1049484783645,10.8049842998249,0,0,1.06644125267617,0.928946687441754,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.51593129416388,0.488894929326078,0.169745085775188,0,0.167506257441816,0.714130922658041,0.195133647857799,1.41871629695572,2.43611158613652,2.07291199254733,0,0,0,0,0,0,0,12.2018448390722,13.7137673312878,0,0,1.89304931649754,1.17131623288992,0.861693590931196,0.716906393857656,0.668396022247182,0,0.809621403349789,0.876767573733936,0.790575555893047,9.3183181762324,0,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0,0.727067458955011,0,0,0,0,6.46835250932197,4.14140516272013,3.10460841078611,1.28602221018955,0.354680467284547,1.96205699362278,1.64549020602121,1.8267896946876,0.704015124191131,0,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0.238744688006273,0.164140899745061,0,7.04616147639937,0,0.412773735926445,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.790839983952838,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.240390899039938,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0.167884616364078,0.19318959403219,0.375364950902364,0,0,0,37.2736216127264,38.6673198666029,30.363462212288,38.1514064802986,41.1049511862385,42.3020582538232,50.6266875173854,44.1314779159736,49.3925225792783,47.6339486811674,5.70830411712972,9.17757208822371,6.31714341290296,3.8897074730927,6.07878171621149,2.94149613520023,3.55594764482584,3.29656091582231,2.24643446714271,4.54854981174835,3.54871019846336,2.64076877940507,3.55837728385553,2.94515701062399,3.56099907524802,2.85776214769844,2.31768651889711,3.6652751888104,3.70877310722976,4.12156976376312,3.42869252385415,1.95223386775271,3.57654284920981,2.0348498328526,3.85848459702856,2.96151127620868,4.20734337607377,3.15683653725411,3.12349461845482,1.68342681497322,3.32178050747688,3.34915240076916,2.04615521584845,4.49316839439301,3.2794123866794,7.49431733813838,1.63752125911786,2.36358159453128,1.91288332068843,1.54413993383661,0.695603506861264
|short_description=p1@Rgs8
}}
}}

Latest revision as of 14:03, 26 September 2015

Short description:p1@Rgs8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rgs8_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: 69bp_to_NM_026380, uc007dad.1_5end
EntrezGene:Rgs8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rgs8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C434.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C334.80
Mouse Granule cells, donor2.CNhs12357.11731-123E348.67
Mouse Granule cells, donor3.CNhs12108.11636-122C736.76
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D379.28
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F366.78
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D757.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D456.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F453.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D839.07
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E449.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F96.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2409.89
cerebellum, neonate N30.CNhs11135.1395-42I2379.73
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A443.89
corpus striatum, adult.CNhs10487.19-21D836.60
corpus striatum, neonate N00.CNhs11226.630-43F111.56
cortex, adult.CNhs10473.12-14D540.85
cortex, neonate N30.CNhs11107.1392-42F239.64
diencephalon, adult.CNhs10482.20-12F262.54
diencephalon, neonate N30.CNhs11201.1388-42B240.40
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G411.57
eyeball, embryo E12.CNhs11016.345-16C68.46
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C69.80
eyeball, neonate N01.CNhs11140.1532-43E711.15
eyeball, neonate N02.CNhs11205.1551-44G814.90
eyeball, neonate N16.CNhs11188.777-19A242.94
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E847.10
hippocampus, neonate N00.CNhs11228.627-43G110.80
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.20
medulla oblongata, neonate N30.CNhs11200.1396-42A313.71
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C73.10
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A238.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A441.10
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A542.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A650.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A744.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A849.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A947.63
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.34e-1823
neuroblast (sensu Vertebrata)7.34e-1823
neural cell4.43e-1543
ectodermal cell1.94e-1444
neurectodermal cell1.94e-1444
neuron5.22e-1233
neuronal stem cell5.22e-1233
neuroblast5.22e-1233
electrically signaling cell5.22e-1233
electrically responsive cell1.07e-0839
electrically active cell1.07e-0839

Uber anatomy
Ontology termp-valuen
neurectoderm2.18e-3964
neural plate2.18e-3964
presumptive neural plate2.18e-3964
regional part of nervous system2.65e-3654
central nervous system2.66e-3673
nervous system4.57e-3675
ectoderm-derived structure1.44e-3495
ectoderm1.44e-3495
presumptive ectoderm1.44e-3495
neural tube1.10e-3352
neural rod1.10e-3352
future spinal cord1.10e-3352
neural keel1.10e-3352
ecto-epithelium1.38e-3273
pre-chordal neural plate4.65e-3149
brain4.87e-3047
future brain4.87e-3047
regional part of brain2.14e-2946
gray matter2.13e-2534
anterior neural tube5.30e-2540
regional part of forebrain4.20e-2439
forebrain4.20e-2439
future forebrain4.20e-2439
brain grey matter5.79e-2229
regional part of telencephalon5.79e-2229
telencephalon5.79e-2229
structure with developmental contribution from neural crest8.23e-2192
cerebral cortex1.60e-1521
cerebral hemisphere1.60e-1521
pallium1.60e-1521
regional part of cerebral cortex6.26e-1317
occipital lobe1.65e-0910
visual cortex1.65e-0910
neocortex1.65e-0910
posterior neural tube7.12e-0912
chordal neural plate7.12e-0912
basal ganglion1.36e-078
nuclear complex of neuraxis1.36e-078
aggregate regional part of brain1.36e-078
collection of basal ganglia1.36e-078
cerebral subcortex1.36e-078
tube2.37e-07114
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