FFCP PHASE1:Mm9::chr1:132747984..132747997,+: Difference between revisions
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|id=chr1:132747984..132747997,+
|short_description=p@chr1:132747984..132747997,+
|description=CAGE_peak_at_chr1:132747984..132747997,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=430 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:132747984..132747997,+ | |||
|description=CAGE_peak_at_chr1:132747984..132747997,+ | |||
|id=chr1:132747984..132747997,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.42e-15!9;CL:0002251!9.42e-15!9;CL:0000066!3.04e-13!25;CL:0000223!7.35e-11!20;CL:0000239!1.01e-10!6;CL:0000677!1.01e-10!6;CL:0000212!1.01e-10!6;CL:0000584!1.01e-10!6;CL:0000075!4.58e-09!7;CL:0002076!4.28e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.59e-13,25;CL:0000682,1.51e-09,3;CL:0000223,3.43e-09,20;CL:0000239,1.31e-08,6;CL:0000677,1.31e-08,6;CL:0000584,1.31e-08,6;CL:0002563,1.84e-08,9;CL:0002251,1.84e-08,9;CL:0000075,2.17e-07,7;CL:0000182,9.80e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.66e-25!15;UBERON:0001242!9.06e-22!13;UBERON:0000060!9.06e-22!13;UBERON:0001262!9.06e-22!13;UBERON:0004786!9.06e-22!13;UBERON:0000160!3.45e-21!43;UBERON:0005409!1.86e-16!59;UBERON:0001007!2.31e-15!128;UBERON:0001555!2.31e-15!128;UBERON:0007026!2.31e-15!128;UBERON:0004119!5.75e-15!130;UBERON:0000925!5.75e-15!130;UBERON:0006595!5.75e-15!130;UBERON:0003350!9.42e-15!9;UBERON:0004808!9.42e-15!9;UBERON:0001277!9.42e-15!9;UBERON:0004923!5.31e-14!24;UBERON:0004921!1.28e-13!126;UBERON:0004185!1.28e-13!126;UBERON:0000485!1.02e-11!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.85e-27,31;UBERON:0000344,1.27e-23,15;UBERON:0005409,3.19e-19,47;UBERON:0001242,1.13e-18,13;UBERON:0001262,1.13e-18,13;UBERON:0004786,1.13e-18,13;UBERON:0004923,5.24e-14,24;UBERON:0002108,2.12e-13,4;UBERON:0001007,7.05e-12,116;UBERON:0001555,7.05e-12,116;UBERON:0007026,7.05e-12,116;UBERON:0004119,1.34e-11,118;UBERON:0000925,1.34e-11,118;UBERON:0006595,1.34e-11,118;UBERON:0000331,1.74e-10,3;UBERON:0002116,1.74e-10,3;UBERON:0001204,1.74e-10,3;UBERON:0001168,1.74e-10,3;UBERON:0004921,7.95e-10,114;UBERON:0003350,1.84e-08,9;UBERON:0004808,1.84e-08,9;UBERON:0001277,1.84e-08,9;UBERON:0001155,4.30e-08,2;UBERON:0000059,4.30e-08,2;UBERON:0000485,7.05e-07,11;UBERON:0001962,7.72e-07,2;UBERON:0001961,7.72e-07,2;UBERON:0001744,7.72e-07,2 | |||
|phase1_expression=0,2.09385244583617,0.909998478779072,3.62957053568196,2.50447864973174,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,1.75991665072747,1.14704640533585,1.14846392823004,2.15380998079537,1.29282739611533,7.60093677825496,2.52030129759931,1.55211357458713,0,0,0,1.1554064790051,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47643829965381,7.14754059192436,3.58421509677868,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58214470653014,3.17340679996253,0,0,0,0,0,0,1.42358718463353,0.823494773620054,0.754005626400808,0.198956472041151,0.19496408711912,6.29173586057955,11.6714546932335,5.57595565112228,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.358794827043824,0.964887042726734,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,3.36998930558661,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.09385244583617,0.909998478779072,3.62957053568196,2.50447864973174,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,1.75991665072747,1.14704640533585,1.14846392823004,2.15380998079537,1.29282739611533,7.60093677825496,2.52030129759931,1.55211357458713,0,0,0,1.1554064790051,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47643829965381,7.14754059192436,3.58421509677868,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58214470653014,3.17340679996253,0,0,0,0,0,0,1.42358718463353,0.823494773620054,0.754005626400808,0.198956472041151,0.19496408711912,6.29173586057955,11.6714546932335,5.57595565112228,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.358794827043824,0.964887042726734,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,3.36998930558661,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:132747984..132747997,+ | |||
}} | }} |
Latest revision as of 17:54, 4 August 2015
Short description: | p@chr1:132747984..132747997, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132747984..132747997, + |
Coexpression cluster: | MCL_coexpression_mm9:430 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.59e-13 | 25 |
M cell of gut | 1.51e-09 | 3 |
endodermal cell | 3.43e-09 | 20 |
brush border epithelial cell | 1.31e-08 | 6 |
gut absorptive cell | 1.31e-08 | 6 |
enterocyte | 1.31e-08 | 6 |
intestinal epithelial cell | 1.84e-08 | 9 |
epithelial cell of alimentary canal | 1.84e-08 | 9 |
columnar/cuboidal epithelial cell | 2.17e-07 | 7 |
hepatocyte | 9.80e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.85e-27 | 31 |
mucosa | 1.27e-23 | 15 |
gastrointestinal system | 3.19e-19 | 47 |
intestinal mucosa | 1.13e-18 | 13 |
wall of intestine | 1.13e-18 | 13 |
gastrointestinal system mucosa | 1.13e-18 | 13 |
organ component layer | 5.24e-14 | 24 |
small intestine | 2.12e-13 | 4 |
digestive system | 7.05e-12 | 116 |
digestive tract | 7.05e-12 | 116 |
primitive gut | 7.05e-12 | 116 |
endoderm-derived structure | 1.34e-11 | 118 |
endoderm | 1.34e-11 | 118 |
presumptive endoderm | 1.34e-11 | 118 |
ileal mucosa | 1.74e-10 | 3 |
ileum | 1.74e-10 | 3 |
mucosa of small intestine | 1.74e-10 | 3 |
wall of small intestine | 1.74e-10 | 3 |
subdivision of digestive tract | 7.95e-10 | 114 |
epithelium of mucosa | 1.84e-08 | 9 |
gastrointestinal system epithelium | 1.84e-08 | 9 |
intestinal epithelium | 1.84e-08 | 9 |
colon | 4.30e-08 | 2 |
large intestine | 4.30e-08 | 2 |
simple columnar epithelium | 7.05e-07 | 11 |
gut-associated lymphoid tissue | 7.72e-07 | 2 |
mucosa-associated lymphoid tissue | 7.72e-07 | 2 |
lymphoid tissue | 7.72e-07 | 2 |