FFCP PHASE1:Mm9::chr19:5038847..5038938,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:5038847..5038938,+
|short_description=p1@B3gnt1
|description=CAGE_peak_1_at_B3gnt1_5end
|association_with_transcript=21bp_to_ENSMUST00000053705,NM_175383,...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=108902 | |EntrezGene=108902 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=347 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BWP8 | |UniProt=Q8BWP8 | ||
|association_with_transcript=21bp_to_ENSMUST00000053705,NM_175383,uc008gbx.1,uc008gby.1_5end | |||
|cluster_id=chr19:5038847..5038938,+ | |||
|description=CAGE_peak_1_at_B3gnt1_5end | |||
|id=chr19:5038847..5038938,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.37e-16!50;CL:0000221!8.73e-14!44;CL:0000133!8.73e-14!44;CL:0002319!1.89e-13!43;CL:0000393!3.70e-11!39;CL:0000211!3.70e-11!39;CL:0002321!5.39e-11!70;CL:0000220!5.39e-11!70;CL:0000117!1.67e-09!23;CL:0000337!1.67e-09!23;CL:0000540!3.26e-09!33;CL:0000047!3.26e-09!33;CL:0000031!3.26e-09!33;CL:0000404!3.26e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.73e-14,44;CL:0000133,8.73e-14,44;CL:0002319,1.89e-13,43;CL:0000393,3.70e-11,39;CL:0000211,3.70e-11,39;CL:0002321,5.39e-11,70;CL:0000117,1.67e-09,23;CL:0000337,1.67e-09,23;CL:0000540,3.26e-09,33;CL:0000047,3.26e-09,33;CL:0000031,3.26e-09,33;CL:0000404,3.26e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.17e-29!73;UBERON:0005743!4.17e-29!73;UBERON:0000073!5.62e-29!75;UBERON:0001016!5.62e-29!75;UBERON:0004121!2.29e-24!102;UBERON:0000924!2.29e-24!102;UBERON:0006601!2.29e-24!102;UBERON:0001049!1.19e-22!52;UBERON:0005068!1.19e-22!52;UBERON:0006241!1.19e-22!52;UBERON:0007135!1.19e-22!52;UBERON:0002346!1.51e-21!71;UBERON:0003075!1.51e-21!71;UBERON:0007284!1.51e-21!71;UBERON:0000955!2.12e-21!50;UBERON:0006238!2.12e-21!50;UBERON:0002616!6.40e-21!49;UBERON:0000033!1.56e-20!63;UBERON:0000025!4.17e-19!114;UBERON:0004111!7.65e-19!122;UBERON:0002020!1.25e-15!34;UBERON:0003080!1.41e-15!40;UBERON:0002780!5.01e-15!39;UBERON:0001890!5.01e-15!39;UBERON:0006240!5.01e-15!39;UBERON:0003056!1.80e-14!49;UBERON:0002791!1.38e-12!29;UBERON:0003528!1.38e-12!29;UBERON:0001893!1.38e-12!29;UBERON:0000956!1.19e-08!21;UBERON:0001869!1.19e-08!21;UBERON:0000203!1.19e-08!21;UBERON:0002619!2.93e-08!17;UBERON:0007811!4.06e-08!86;UBERON:0003076!7.14e-08!12;UBERON:0003057!7.14e-08!12;UBERON:0000153!2.28e-07!94;UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10;UBERON:0000477!2.91e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.17e-29,73;UBERON:0001016,5.62e-29,75;UBERON:0010314,5.46e-25,92;UBERON:0000073,3.10e-24,54;UBERON:0004121,1.00e-23,95;UBERON:0000924,1.00e-23,95;UBERON:0006601,1.00e-23,95;UBERON:0001049,1.19e-22,52;UBERON:0005068,1.19e-22,52;UBERON:0006241,1.19e-22,52;UBERON:0007135,1.19e-22,52;UBERON:0002346,2.46e-21,64;UBERON:0003075,2.46e-21,64;UBERON:0007284,2.46e-21,64;UBERON:0000955,2.41e-19,47;UBERON:0006238,2.41e-19,47;UBERON:0000025,4.17e-19,114;UBERON:0002616,7.11e-19,46;UBERON:0004111,7.65e-19,122;UBERON:0010371,1.41e-17,73;UBERON:0002020,1.25e-15,34;UBERON:0003080,1.41e-15,40;UBERON:0002780,5.01e-15,39;UBERON:0001890,5.01e-15,39;UBERON:0006240,5.01e-15,39;UBERON:0003056,1.80e-14,49;UBERON:0003528,1.38e-12,29;UBERON:0002791,1.38e-12,29;UBERON:0001893,1.38e-12,29;UBERON:0000956,1.19e-08,21;UBERON:0001869,1.19e-08,21;UBERON:0000203,1.19e-08,21;UBERON:0002619,2.93e-08,17;UBERON:0003076,7.14e-08,12;UBERON:0003057,7.14e-08,12;UBERON:0002021,2.52e-07,10;UBERON:0000411,2.52e-07,10;UBERON:0001950,2.52e-07,10 | |||
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| ||
|short_description=p1@B3gnt1 | |||
}} | }} |
Latest revision as of 22:29, 25 September 2015
Short description: | p1@B3gnt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B3gnt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:347 |
Association with transcript: | 21bp_to_ENSMUST00000053705, NM_175383, uc008gbx.1, uc008gby.1_5end |
EntrezGene: | B3gnt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.73e-14 | 44 |
neurectodermal cell | 8.73e-14 | 44 |
neural cell | 1.89e-13 | 43 |
electrically responsive cell | 3.70e-11 | 39 |
electrically active cell | 3.70e-11 | 39 |
embryonic cell | 5.39e-11 | 70 |
CNS neuron (sensu Vertebrata) | 1.67e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.67e-09 | 23 |
neuron | 3.26e-09 | 33 |
neuronal stem cell | 3.26e-09 | 33 |
neuroblast | 3.26e-09 | 33 |
electrically signaling cell | 3.26e-09 | 33 |