FFCP PHASE1:Hg19::chr1:110693194..110693199,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=388662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=31399 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9H1V8 | ||
|association_with_transcript=62bp_to_ENST00000450985,NM_001010898,uc009wfq.2_5end | |association_with_transcript=62bp_to_ENST00000450985,NM_001010898,uc009wfq.2_5end | ||
|cluster_id=chr1:110693194..110693199,+ | |cluster_id=chr1:110693194..110693199,+ | ||
Latest revision as of 00:13, 16 September 2015
| Short description: | p4@SLC6A17 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_SLC6A17_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 62bp_to_ENST00000450985, NM_001010898, uc009wfq.2_5end |
| EntrezGene: | SLC6A17 |
| HGNC: | 31399 |
| UniProt: | Q9H1V8 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p4@SLC6A17 |
|---|
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2.5
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3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 6.02e-45 | 53 |
| regional part of brain | 6.02e-45 | 53 |
| neocortex | 7.87e-45 | 20 |
| brain | 1.99e-42 | 68 |
| future brain | 1.99e-42 | 68 |
| neural tube | 2.02e-42 | 56 |
| neural rod | 2.02e-42 | 56 |
| future spinal cord | 2.02e-42 | 56 |
| neural keel | 2.02e-42 | 56 |
| regional part of cerebral cortex | 8.80e-41 | 22 |
Showing 1 to 10 of 70 entries
