FFCP PHASE1:Mm9::chr19:48280623..48280653,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:48280623..48280653,+
|short_description=p1@Sorcs3
|description=CAGE_peak_1_at_Sorcs3_5end
|association_with_transcript=108bp_to_ENSMUST00000078880,NM_0256...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66673 | |EntrezGene=66673 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VI51,Q1HL22 | |UniProt=Q8VI51,Q1HL22 | ||
|association_with_transcript=108bp_to_ENSMUST00000078880,NM_025696,uc008hvx.1_5end | |||
|cluster_id=chr19:48280623..48280653,+ | |||
|description=CAGE_peak_1_at_Sorcs3_5end | |||
|id=chr19:48280623..48280653,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.27e-13!23;CL:0000337!1.27e-13!23;CL:0000540!2.97e-10!33;CL:0000047!2.97e-10!33;CL:0000031!2.97e-10!33;CL:0000404!2.97e-10!33;CL:0000393!6.74e-07!39;CL:0000211!6.74e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.17e-16,23;CL:0000337,2.17e-16,23;CL:0000540,1.79e-10,33;CL:0000047,1.79e-10,33;CL:0000031,1.79e-10,33;CL:0000404,1.79e-10,33;CL:0000393,7.75e-08,39;CL:0000211,7.75e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.52e-23!63;UBERON:0001049!2.34e-23!52;UBERON:0005068!2.34e-23!52;UBERON:0006241!2.34e-23!52;UBERON:0007135!2.34e-23!52;UBERON:0001017!4.39e-23!73;UBERON:0005743!4.39e-23!73;UBERON:0002346!1.34e-22!71;UBERON:0003075!1.34e-22!71;UBERON:0007284!1.34e-22!71;UBERON:0000073!3.05e-22!75;UBERON:0001016!3.05e-22!75;UBERON:0000955!4.73e-22!50;UBERON:0006238!4.73e-22!50;UBERON:0002616!2.83e-21!49;UBERON:0003056!5.65e-21!49;UBERON:0004121!5.35e-20!102;UBERON:0000924!5.35e-20!102;UBERON:0006601!5.35e-20!102;UBERON:0003080!8.46e-19!40;UBERON:0002020!2.84e-18!34;UBERON:0002780!3.81e-18!39;UBERON:0001890!3.81e-18!39;UBERON:0006240!3.81e-18!39;UBERON:0002791!6.05e-15!29;UBERON:0003528!6.05e-15!29;UBERON:0001893!6.05e-15!29;UBERON:0000153!1.34e-13!94;UBERON:0007811!7.69e-12!86;UBERON:0000956!8.34e-10!21;UBERON:0001869!8.34e-10!21;UBERON:0000203!8.34e-10!21;UBERON:0002619!4.15e-09!17;UBERON:0002021!5.56e-09!10;UBERON:0000411!5.56e-09!10;UBERON:0001950!5.56e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.08e-32,54;UBERON:0001049,1.06e-29,52;UBERON:0005068,1.06e-29,52;UBERON:0006241,1.06e-29,52;UBERON:0007135,1.06e-29,52;UBERON:0001017,4.38e-28,73;UBERON:0001016,7.22e-27,75;UBERON:0002346,7.14e-26,64;UBERON:0003075,7.14e-26,64;UBERON:0007284,7.14e-26,64;UBERON:0000955,6.13e-25,47;UBERON:0006238,6.13e-25,47;UBERON:0002020,3.25e-24,34;UBERON:0002616,7.42e-24,46;UBERON:0003080,3.70e-22,40;UBERON:0010371,5.69e-22,73;UBERON:0002780,3.14e-21,39;UBERON:0001890,3.14e-21,39;UBERON:0006240,3.14e-21,39;UBERON:0004121,3.78e-21,95;UBERON:0000924,3.78e-21,95;UBERON:0006601,3.78e-21,95;UBERON:0003056,2.03e-20,49;UBERON:0003528,2.50e-19,29;UBERON:0002791,2.50e-19,29;UBERON:0001893,2.50e-19,29;UBERON:0010314,2.99e-14,92;UBERON:0002619,1.08e-13,17;UBERON:0002021,1.20e-12,10;UBERON:0000411,1.20e-12,10;UBERON:0001950,1.20e-12,10;UBERON:0000956,7.32e-12,21;UBERON:0001869,7.32e-12,21;UBERON:0000203,7.32e-12,21;UBERON:0002420,4.69e-09,8;UBERON:0007245,4.69e-09,8;UBERON:0010009,4.69e-09,8;UBERON:0010011,4.69e-09,8;UBERON:0000454,4.69e-09,8;UBERON:0003076,6.54e-08,12;UBERON:0003057,6.54e-08,12;UBERON:0002240,5.40e-07,6;UBERON:0005174,5.40e-07,6;UBERON:0001137,5.40e-07,6 | |||
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| ||
|short_description=p1@Sorcs3 | |||
}} | }} |
Latest revision as of 22:20, 25 September 2015
Short description: | p1@Sorcs3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sorcs3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 108bp_to_ENSMUST00000078880, NM_025696, uc008hvx.1_5end |
EntrezGene: | Sorcs3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.17e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.17e-16 | 23 |
neuron | 1.79e-10 | 33 |
neuronal stem cell | 1.79e-10 | 33 |
neuroblast | 1.79e-10 | 33 |
electrically signaling cell | 1.79e-10 | 33 |
electrically responsive cell | 7.75e-08 | 39 |
electrically active cell | 7.75e-08 | 39 |