FFCP PHASE1:Mm9::chr19:46119469..46119478,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:46119469..46119478,-
|short_description=p15@Ldb1
|description=CAGE_peak_15_at_Ldb1_5end
|association_with_transcript=-65bp_to_ENSMUST00000026252_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16825 | |EntrezGene=16825 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=633 | |||
|TSSclassifier=NA | |||
|UniProt=P70662 | |UniProt=P70662 | ||
|association_with_transcript=-65bp_to_ENSMUST00000026252_5end | |||
|cluster_id=chr19:46119469..46119478,- | |||
|description=CAGE_peak_15_at_Ldb1_5end | |||
|id=chr19:46119469..46119478,- | |||
|ontology_enrichment_celltype=CL:0000988!1.04e-08!32;CL:0002032!1.04e-08!32;CL:0000037!1.04e-08!32;CL:0000566!1.04e-08!32;CL:0000837!1.04e-08!32;CL:0000738!3.44e-07!17;CL:0002087!3.44e-07!17;CL:0002031!7.76e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.18e-19,32;CL:0002032,1.18e-19,32;CL:0000037,1.18e-19,32;CL:0000837,1.18e-19,32;CL:0000738,9.69e-19,17;CL:0002087,9.69e-19,17;CL:0002031,5.98e-17,25;CL:0002320,1.75e-16,46;CL:0000134,1.75e-16,46;CL:0000838,3.62e-15,12;CL:0000542,6.78e-14,13;CL:0000051,6.78e-14,13;CL:0000219,1.86e-13,54;CL:0000084,6.54e-13,11;CL:0000827,6.54e-13,11;CL:0000791,6.16e-12,9;CL:0000789,6.16e-12,9;CL:0002420,6.16e-12,9;CL:0002419,6.16e-12,9;CL:0000790,6.16e-12,9;CL:0000624,1.70e-09,8;CL:0000557,3.21e-09,7;CL:0000034,7.02e-09,97;CL:0000049,6.02e-08,19;CL:0000763,2.58e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.04e-10!45;UBERON:0003061!3.04e-10!45;UBERON:0002193!5.64e-10!48;UBERON:0003081!8.72e-08!88;UBERON:0000065!2.11e-07!41;UBERON:0001004!6.80e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.75e-16,46;UBERON:0002193,4.28e-13,48;UBERON:0002405,4.28e-13,48;UBERON:0002390,2.47e-12,45;UBERON:0003061,2.47e-12,45;UBERON:0002371,1.10e-09,16 | |||
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| ||
|short_description=p15@Ldb1 | |||
}} | }} |
Latest revision as of 20:51, 25 September 2015
Short description: | p15@Ldb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Ldb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:633 |
Association with transcript: | -65bp_to_ENSMUST00000026252_5end |
EntrezGene: | Ldb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.18e-19 | 32 |
hematopoietic oligopotent progenitor cell | 1.18e-19 | 32 |
hematopoietic stem cell | 1.18e-19 | 32 |
hematopoietic multipotent progenitor cell | 1.18e-19 | 32 |
leukocyte | 9.69e-19 | 17 |
nongranular leukocyte | 9.69e-19 | 17 |
hematopoietic lineage restricted progenitor cell | 5.98e-17 | 25 |
connective tissue cell | 1.75e-16 | 46 |
mesenchymal cell | 1.75e-16 | 46 |
lymphoid lineage restricted progenitor cell | 3.62e-15 | 12 |
lymphocyte | 6.78e-14 | 13 |
common lymphoid progenitor | 6.78e-14 | 13 |
motile cell | 1.86e-13 | 54 |
T cell | 6.54e-13 | 11 |
pro-T cell | 6.54e-13 | 11 |
mature alpha-beta T cell | 6.16e-12 | 9 |
alpha-beta T cell | 6.16e-12 | 9 |
immature T cell | 6.16e-12 | 9 |
mature T cell | 6.16e-12 | 9 |
immature alpha-beta T cell | 6.16e-12 | 9 |
CD4-positive, alpha-beta T cell | 1.70e-09 | 8 |
granulocyte monocyte progenitor cell | 3.21e-09 | 7 |
stem cell | 7.02e-09 | 97 |
common myeloid progenitor | 6.02e-08 | 19 |
myeloid cell | 2.58e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.75e-16 | 46 |
hemolymphoid system | 4.28e-13 | 48 |
immune system | 4.28e-13 | 48 |
hematopoietic system | 2.47e-12 | 45 |
blood island | 2.47e-12 | 45 |
bone marrow | 1.10e-09 | 16 |