FFCP PHASE1:Mm9::chr19:23215509..23215523,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:23215509..23215523,+
|short_description=p4@Klf9
|description=CAGE_peak_4_at_Klf9_5end
|association_with_transcript=-192bp_to_ENSMUST00000036884,NM_010638,...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16601 | |EntrezGene=16601 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CEC4 | |UniProt=Q8CEC4 | ||
|association_with_transcript=-192bp_to_ENSMUST00000036884,NM_010638,uc008gzz.1_5end | |||
|cluster_id=chr19:23215509..23215523,+ | |||
|description=CAGE_peak_4_at_Klf9_5end | |||
|id=chr19:23215509..23215523,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.83e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!5.20e-08!122;UBERON:0007023!5.69e-07!51;UBERON:0000025!7.82e-07!114;UBERON:0000955!8.02e-07!50;UBERON:0006238!8.02e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,9.18e-13,122;UBERON:0000025,6.39e-12,114;UBERON:0000955,1.71e-10,47;UBERON:0006238,1.71e-10,47;UBERON:0002616,4.07e-10,46;UBERON:0000073,1.41e-09,54;UBERON:0001049,7.99e-09,52;UBERON:0005068,7.99e-09,52;UBERON:0006241,7.99e-09,52;UBERON:0007135,7.99e-09,52;UBERON:0002021,1.37e-08,10;UBERON:0000411,1.37e-08,10;UBERON:0001950,1.37e-08,10;UBERON:0001016,3.13e-08,75;UBERON:0010314,6.43e-08,92;UBERON:0004121,9.93e-08,95;UBERON:0000924,9.93e-08,95;UBERON:0006601,9.93e-08,95;UBERON:0001017,2.15e-07,73;UBERON:0002619,3.29e-07,17;UBERON:0003080,5.18e-07,40;UBERON:0002346,6.54e-07,64;UBERON:0003075,6.54e-07,64;UBERON:0007284,6.54e-07,64;UBERON:0007023,8.54e-07,51 | |||
|phase1_expression=0.160148847104794,1.04692622291808,1.81999695755814,0,0,0.16787927191189,0.467225281191051,0,0.563154888606667,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,1.39912375625629,0.157731082679119,0.137114433605739,0,3.40173160604279,0,0,0.47997726838022,0.45881856213434,1.14846392823004,0.86152399231815,0.646413698057667,0,0.252030129759931,0,0,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0.418531630736908,0,0,0,0,0,0.251793635951155,0.506884656097573,0.367093504323363,5.47673941043627,2.18025156380447,1.31811709640683,2.72201858703997,5.17949760013841,4.31257693094915,0,0,0,4.11615097657515,4.58453503902011,9.7977697532714,0,0,0,1.0165335962074,3.55717918444456,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0.571301968807607,0.662605622854841,0,0,0,1.10115880999389,1.40456071893706,2.91852413186863,0,0,0,1.3959149950069,3.37657566019008,2.29197371665215,0.294628585473668,0.284743361598206,0,1.81742863999642,2.64500460373749,13.6236309689789,2.58127163094416,4.75979933595425,12.4131734076698,12.9955283489534,3.13618820968135,3.5111105032938,0.511290967734173,0.519572009205738,1.41335829804136,0.14084341977668,0,0,0,0,0,0,8.67797485864856,0.258937883647172,1.7813056687779,0.173485326766136,0,0.461230994512117,0.452167921657868,0.587943535678524,1.75933227861546,0,9.54355755671417,0,0.485300549842228,5.74187947997023,2.42437626567611,0,1.75668478206928,1.67557365450764,0.766371165625774,0.11981512450592,0,0.127070227073065,3.74476598512057,4.57500602818627,0.125654352112864,1.21677024134594,3.83573185995496,2.49345653471472,3.24482526135515,0.509196819251581,1.7416975885413,0.252722758433675,1.68353484709179,0,0.229902104433473,0,0,0.476255494059295,0.384341160854549,0.187403449119458,3.10444044886819,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0.350296027101508,0,0.32833492815819,5.91802309684747,5.11699955988663,3.51280184465681,6.03928884421673,3.99550902271842,0.102904612379284,0.660837565967596,0,0,0,0,0.201683524623343,0,0,0,0,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0,0.280543279561274,0.569128834118316,2.80459281161244,2.04098346193787,5.79966670432462,1.48226313543574,0,0,0,0,0,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,2.02063102357689,1.07638448113147,5.30687873499704,3.69506380333209,0,0,0,0,0,0,1.56106918286239,0.157635144106191,0.44292937929755,0.318909537314974,2.62181303545181,1.38147985492716,3.03763023021174,0,0,2.95058563811422,2.48343071674259,2.24770825982909,3.28192722458169,0.819674726883377,6.81671503451807,0.315508219416257,0,0,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,1.28528526568723,0.567760340833074,0,0.325773918707152,0.659880491890142,2.65490276679926,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,5.15677716240934,2.38307724027652,0,0,0.214337035031592,0.354680467284547,0.713475270408282,0.822745103010605,2.43571959291679,2.3467170806371,0,0.882113592219848,0.32977250588296,0.484393280087717,0.0603129249281559,0.358117032009409,0.492422699235184,1.1659233465194,2.59595422814714,0,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0.679913719975421,0.279902904647316,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0.41326727862668,0.523511883968059,0.259229946583586,2.4853572523477,1.12738587736838,0,0,0,0,0,0,0.13020438484395,0.629156066554265,0.724752362478018,0.864090018773596,0.632022241256357,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,2.72076460338254,0.665957860122194,0.358855426437903,0.671538465456314,1.15913756419314,1.87682475451182,0.73260649706906,1.71494703263253,0.501572104035363,1.6942555278512,2.76195141904306,6.87474616127276,3.43706364687375,3.42541259885321,1.5107877947794,3.37511250115903,2.2516060161211,2.71885445390523,2.5888015587591,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.256100609619477,0.402048282689293,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.354951612318675,0,0.436039249896986,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0,0,1.07435527024149,0.765153328275374,0.441182838239031,1.39120701372253 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|phase1_expression=0.160148847104794,1.04692622291808,1.81999695755814,0,0,0.16787927191189,0.467225281191051,0,0.563154888606667,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,1.39912375625629,0.157731082679119,0.137114433605739,0,3.40173160604279,0,0,0.47997726838022,0.45881856213434,1.14846392823004,0.86152399231815,0.646413698057667,0,0.252030129759931,0,0,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0.418531630736908,0,0,0,0,0,0.251793635951155,0.506884656097573,0.367093504323363,5.47673941043627,2.18025156380447,1.31811709640683,2.72201858703997,5.17949760013841,4.31257693094915,0,0,0,4.11615097657515,4.58453503902011,9.7977697532714,0,0,0,1.0165335962074,3.55717918444456,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0.571301968807607,0.662605622854841,0,0,0,1.10115880999389,1.40456071893706,2.91852413186863,0,0,0,1.3959149950069,3.37657566019008,2.29197371665215,0.294628585473668,0.284743361598206,0,1.81742863999642,2.64500460373749,13.6236309689789,2.58127163094416,4.75979933595425,12.4131734076698,12.9955283489534,3.13618820968135,3.5111105032938,0.511290967734173,0.519572009205738,1.41335829804136,0.14084341977668,0,0,0,0,0,0,8.67797485864856,0.258937883647172,1.7813056687779,0.173485326766136,0,0.461230994512117,0.452167921657868,0.587943535678524,1.75933227861546,0,9.54355755671417,0,0.485300549842228,5.74187947997023,2.42437626567611,0,1.75668478206928,1.67557365450764,0.766371165625774,0.11981512450592,0,0.127070227073065,3.74476598512057,4.57500602818627,0.125654352112864,1.21677024134594,3.83573185995496,2.49345653471472,3.24482526135515,0.509196819251581,1.7416975885413,0.252722758433675,1.68353484709179,0,0.229902104433473,0,0,0.476255494059295,0.384341160854549,0.187403449119458,3.10444044886819,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0.350296027101508,0,0.32833492815819,5.91802309684747,5.11699955988663,3.51280184465681,6.03928884421673,3.99550902271842,0.102904612379284,0.660837565967596,0,0,0,0,0.201683524623343,0,0,0,0,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0,0.280543279561274,0.569128834118316,2.80459281161244,2.04098346193787,5.79966670432462,1.48226313543574,0,0,0,0,0,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,2.02063102357689,1.07638448113147,5.30687873499704,3.69506380333209,0,0,0,0,0,0,1.56106918286239,0.157635144106191,0.44292937929755,0.318909537314974,2.62181303545181,1.38147985492716,3.03763023021174,0,0,2.95058563811422,2.48343071674259,2.24770825982909,3.28192722458169,0.819674726883377,6.81671503451807,0.315508219416257,0,0,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,1.28528526568723,0.567760340833074,0,0.325773918707152,0.659880491890142,2.65490276679926,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,5.15677716240934,2.38307724027652,0,0,0.214337035031592,0.354680467284547,0.713475270408282,0.822745103010605,2.43571959291679,2.3467170806371,0,0.882113592219848,0.32977250588296,0.484393280087717,0.0603129249281559,0.358117032009409,0.492422699235184,1.1659233465194,2.59595422814714,0,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0.679913719975421,0.279902904647316,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0.41326727862668,0.523511883968059,0.259229946583586,2.4853572523477,1.12738587736838,0,0,0,0,0,0,0.13020438484395,0.629156066554265,0.724752362478018,0.864090018773596,0.632022241256357,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,2.72076460338254,0.665957860122194,0.358855426437903,0.671538465456314,1.15913756419314,1.87682475451182,0.73260649706906,1.71494703263253,0.501572104035363,1.6942555278512,2.76195141904306,6.87474616127276,3.43706364687375,3.42541259885321,1.5107877947794,3.37511250115903,2.2516060161211,2.71885445390523,2.5888015587591,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.256100609619477,0.402048282689293,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.354951612318675,0,0.436039249896986,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0,0,1.07435527024149,0.765153328275374,0.441182838239031,1.39120701372253 | ||
|short_description=p4@Klf9 | |||
}} | }} |
Latest revision as of 00:00, 2 October 2015
Short description: | p4@Klf9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Klf9_5end |
Coexpression cluster: | NA |
Association with transcript: | -192bp_to_ENSMUST00000036884, NM_010638, uc008gzz.1_5end |
EntrezGene: | Klf9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.83e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 9.18e-13 | 122 |
tube | 6.39e-12 | 114 |
brain | 1.71e-10 | 47 |
future brain | 1.71e-10 | 47 |
regional part of brain | 4.07e-10 | 46 |
regional part of nervous system | 1.41e-09 | 54 |
neural tube | 7.99e-09 | 52 |
neural rod | 7.99e-09 | 52 |
future spinal cord | 7.99e-09 | 52 |
neural keel | 7.99e-09 | 52 |
occipital lobe | 1.37e-08 | 10 |
visual cortex | 1.37e-08 | 10 |
neocortex | 1.37e-08 | 10 |
nervous system | 3.13e-08 | 75 |
structure with developmental contribution from neural crest | 6.43e-08 | 92 |
ectoderm-derived structure | 9.93e-08 | 95 |
ectoderm | 9.93e-08 | 95 |
presumptive ectoderm | 9.93e-08 | 95 |
central nervous system | 2.15e-07 | 73 |
regional part of cerebral cortex | 3.29e-07 | 17 |
anterior neural tube | 5.18e-07 | 40 |
neurectoderm | 6.54e-07 | 64 |
neural plate | 6.54e-07 | 64 |
presumptive neural plate | 6.54e-07 | 64 |
adult organism | 8.54e-07 | 51 |