FFCP PHASE1:Mm9::chr18:89063715..89063763,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:89063715..89063763,-
|short_description=p1@Socs6
|description=CAGE_peak_1_at_Socs6_5end
|association_with_transcript=0bp_to_ENSMUST00000125362,ENSMUST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54607 | |EntrezGene=54607 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9JLY0 | |UniProt=Q9JLY0 | ||
|association_with_transcript=0bp_to_ENSMUST00000125362,ENSMUST00000136173_5end | |||
|cluster_id=chr18:89063715..89063763,- | |||
|description=CAGE_peak_1_at_Socs6_5end | |||
|id=chr18:89063715..89063763,- | |||
|ontology_enrichment_celltype=CL:0000117!4.12e-09!23;CL:0000337!4.12e-09!23;CL:0000540!3.28e-07!33;CL:0000047!3.28e-07!33;CL:0000031!3.28e-07!33;CL:0000404!3.28e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.11e-09,23;CL:0000337,4.11e-09,23;CL:0000540,3.27e-07,33;CL:0000047,3.27e-07,33;CL:0000031,3.27e-07,33;CL:0000404,3.27e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.09e-08!63;UBERON:0004121!3.67e-08!102;UBERON:0000924!3.67e-08!102;UBERON:0006601!3.67e-08!102;UBERON:0002346!8.57e-07!71;UBERON:0003075!8.57e-07!71;UBERON:0007284!8.57e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.44e-08,95;UBERON:0000924,1.44e-08,95;UBERON:0006601,1.44e-08,95;UBERON:0000073,1.71e-07,54;UBERON:0002346,2.59e-07,64;UBERON:0003075,2.59e-07,64;UBERON:0007284,2.59e-07,64;UBERON:0010314,2.64e-07,92;UBERON:0010371,3.40e-07,73 | |||
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| |phase1_expression=7.68714466103011,2.09385244583617,1.81999695755814,1.81478526784098,1.00179145989269,2.01455126294268,1.40167584357315,1.93684985162364,3.94208422024667,2.34064526321993,2.05461561870606,3.11111420081812,1.19840510951844,1.22388563386596,1.33243904726265,0.809901069559304,0,1.73504190947031,2.60517423850904,0.84877930359606,3.40173160604279,1.78723712161594,0.783599367416806,0.95995453676044,2.2940928106717,1.14846392823004,0.86152399231815,2.58565479223067,2.66032787238923,3.2763916868791,0.886922042621219,1.90509202037889,2.46025915033828,0,3.17736781726402,1.82858109894342,1.22501613757421,0.837063261473815,2.3440060335714,3.14114246384279,0,0.683045484958446,0,1.88845226963366,2.93993100536592,1.28482726513177,6.25913075478431,3.48840250208714,3.07560655828261,3.88859798148567,1.95980990275508,0,2.85230430298152,2.17608642603403,3.02484419228218,2.31533492432352,2.57880095944881,3.09403255366465,8.09265843438391,5.81890077199236,8.87363964908651,3.38844532069132,3.55717918444456,1.7997994345628,0,2.1314403448383,3.29560121570245,3.45796474789399,7.77672092313582,8.23536223823313,8.83364837675805,8.2838785477103,5.30084498283872,7.22695715368229,5.75072826109418,6.43453150627015,7.70811166995721,8.68273898979276,7.83393319606842,7.64940468835124,4.48289453651807,3.12548022334056,3.35019598801657,5.6276261003168,5.19514042441154,5.59794312399969,8.68467252874528,8.38797506213853,4.24066682665831,3.85414956544606,3.47837386442013,3.44169550792555,11.5595126730318,1.07940638327563,4.54843492213368,2.68816132258401,1.82577746171277,2.04516387093669,1.81850203222008,3.18005617059306,7.18301440861071,1.28326477414318,5.09610479413291,14.2213340630666,3.68034769719064,4.30711771307668,6.0662933401774,2.96878087269556,2.84831672011889,3.71105347662062,2.60227990149204,2.74018930480927,3.45923245884088,3.46662073271032,6.11461277105665,4.52399728786832,6.42706916109372,2.60278842455841,1.76922110389975,7.44127509758082,3.09178125844551,2.42437626567611,1.86391761218122,7.31951992528868,4.39838084308256,1.02182822083437,4.19352935770721,4.19931911695385,4.95573885584952,3.89455662452539,6.40500843946077,11.1832373380449,4.51943232499919,4.60287823194595,4.77912502486988,6.48965052271031,10.2857757488819,3.35898820647251,2.27450482590307,3.57751155007006,4.68433594665733,7.35686734187113,6.30217454318722,5.12396380641431,9.18492738542926,5.50888997224854,6.09061209638237,4.39795730256327,7.54487975264948,5.10586416453112,8.2697028357056,6.35667624039967,6.67313398141435,7.66154766348766,3.2925141825271,6.36909653819178,2.1066395619397,3.86021860672073,3.9782889915383,3.93538967817454,3.75241695969754,4.32148947506436,3.78791576936336,4.13204886669548,3.39387648352232,2.32533944750408,4.56064782379353,6.889155199663,4.77223564749093,3.2833492815819,4.86412857275134,6.28659945928929,3.95190207523891,4.42881181909227,2.3131894342054,9.05560588937703,0.660837565967596,2.11560453330835,4.05247676016945,3.94802342162745,3.47942145569652,5.24377164020691,4.00280478920767,2.09248188723815,0.474529061544512,4.77626968699632,4.02136334080431,5.17286827306992,3.11942539390592,0.898819408654221,1.29682829924817,1.7922714592893,4.1726938209678,5.25543158004753,4.50830942692322,4.48032921259691,4.07300223052014,9.60860732497364,5.88099795255593,2.65698266363284,4.23896565171712,4.44229790118482,1.77871576252289,3.00321190288969,1.76903095601883,2.24862112384854,1.62288097110802,2.894125917029,2.03700681425136,0.863088412352432,5.35046248357617,1.37280706594041,1.43768206527355,2.60498663367952,4.68056509671841,4.2938409251009,1.4351793081753,1.4473305640901,2.03228509183265,4.54779388249163,4.56301934037672,4.07388205860452,4.92849521405854,3.01511263395268,2.61848004974615,5.65887578787617,4.41378403497335,4.4292937929755,4.9430978283821,3.11340297959902,2.76295970985433,3.32692834737477,7.53956419696361,3.80733978673097,1.47529281905711,3.03530420935206,5.13761887960934,3.7507739709505,3.44263385291018,6.05930225290495,4.10160685241134,2.34263246577983,3.23135096599198,2.38968797952552,2.89638276307112,7.07691326972081,2.42886421004937,4.09158201075837,5.13874111330481,3.21321316421807,3.83238230062325,4.98583690268315,11.2392001953967,3.79431282836832,3.98235415019888,2.6705869977048,4.23252979750651,3.96070667487386,2.36241514304618,3.99665692327106,3.87642439752332,3.27180356529755,3.92147116223193,4.74055136903724,2.10837217149998,2.06271086496374,4.42571487479924,7.38250485528372,2.32845630808958,6.00143698088458,6.91626911204867,6.95638388648075,7.0756078858912,6.69822888052118,0.938686832254841,6.56679419677843,2.8668691747145,2.4732937941222,6.45857706783622,4.52346936961169,3.34242563208782,3.61109979439135,1.7488850197791,3.33765543618917,1.36696704638282,3.30218988741156,1.66675074632741,1.31857919903284,0.820165366326151,0.686334519619568,6.79913719975421,6.43776680688827,7.87739850685216,0.954670618015114,5.69404788446044,2.84647253977588,3.24016022465404,3.97267762427491,3.71216358368502,2.2926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| ||
|short_description=p1@Socs6 | |||
}} | }} |
Latest revision as of 19:45, 1 October 2015
Short description: | p1@Socs6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Socs6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000125362, ENSMUST00000136173_5end |
EntrezGene: | Socs6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.11e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.11e-09 | 23 |
neuron | 3.27e-07 | 33 |
neuronal stem cell | 3.27e-07 | 33 |
neuroblast | 3.27e-07 | 33 |
electrically signaling cell | 3.27e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.44e-08 | 95 |
ectoderm | 1.44e-08 | 95 |
presumptive ectoderm | 1.44e-08 | 95 |
regional part of nervous system | 1.71e-07 | 54 |
neurectoderm | 2.59e-07 | 64 |
neural plate | 2.59e-07 | 64 |
presumptive neural plate | 2.59e-07 | 64 |
structure with developmental contribution from neural crest | 2.64e-07 | 92 |
ecto-epithelium | 3.40e-07 | 73 |