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FFCP PHASE1:Mm9::chr18:61085266..61085293,+: Difference between revisions

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(Created page with "{{FFCP |id=chr18:61085266..61085293,+ |short_description=p1@Camk2a |description=CAGE_peak_1_at_Camk2a_5end |association_with_transcript=0bp_to_ENSMUST00000025519,ENSMUST00...")
 
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{{FFCP
{{FFCP
|id=chr18:61085266..61085293,+
|DHSsupport=NA
|short_description=p1@Camk2a
|DPIdataset=NA
|description=CAGE_peak_1_at_Camk2a_5end
|association_with_transcript=0bp_to_ENSMUST00000025519,ENSMUST00000102888,ENSMUST00000134496,NM_177407,uc008fbf.1,uc008fbg.2_5end
|EntrezGene=12322
|EntrezGene=12322
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=F8WIS9,P11798,Q80TN1
|UniProt=F8WIS9,P11798,Q80TN1
|association_with_transcript=0bp_to_ENSMUST00000025519,ENSMUST00000102888,ENSMUST00000134496,NM_177407,uc008fbf.1,uc008fbg.2_5end
|cluster_id=chr18:61085266..61085293,+
|description=CAGE_peak_1_at_Camk2a_5end
|id=chr18:61085266..61085293,+
|ontology_enrichment_celltype=CL:0000117!7.96e-14!23;CL:0000337!7.96e-14!23;CL:0002319!9.63e-14!43;CL:0000221!4.66e-13!44;CL:0000133!4.66e-13!44;CL:0000540!3.36e-11!33;CL:0000047!3.36e-11!33;CL:0000031!3.36e-11!33;CL:0000404!3.36e-11!33;CL:0000055!4.69e-10!50;CL:0000393!4.53e-08!39;CL:0000211!4.53e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.15e-16,23;CL:0000337,2.15e-16,23;CL:0002319,2.83e-12,43;CL:0000221,9.72e-12,44;CL:0000133,9.72e-12,44;CL:0000540,2.86e-10,33;CL:0000047,2.86e-10,33;CL:0000031,2.86e-10,33;CL:0000404,2.86e-10,33;CL:0000393,2.10e-07,39;CL:0000211,2.10e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.97e-36!73;UBERON:0005743!4.97e-36!73;UBERON:0000073!6.02e-36!75;UBERON:0001016!6.02e-36!75;UBERON:0002346!7.08e-32!71;UBERON:0003075!7.08e-32!71;UBERON:0007284!7.08e-32!71;UBERON:0001049!1.38e-31!52;UBERON:0005068!1.38e-31!52;UBERON:0006241!1.38e-31!52;UBERON:0007135!1.38e-31!52;UBERON:0000955!6.93e-31!50;UBERON:0006238!6.93e-31!50;UBERON:0004121!2.43e-30!102;UBERON:0000924!2.43e-30!102;UBERON:0006601!2.43e-30!102;UBERON:0002616!4.61e-30!49;UBERON:0000033!5.01e-30!63;UBERON:0003056!1.32e-26!49;UBERON:0003080!1.60e-25!40;UBERON:0002780!9.18e-25!39;UBERON:0001890!9.18e-25!39;UBERON:0006240!9.18e-25!39;UBERON:0002020!5.24e-23!34;UBERON:0002791!3.75e-20!29;UBERON:0003528!3.75e-20!29;UBERON:0001893!3.75e-20!29;UBERON:0007811!8.14e-17!86;UBERON:0000153!4.54e-15!94;UBERON:0000956!6.17e-15!21;UBERON:0001869!6.17e-15!21;UBERON:0000203!6.17e-15!21;UBERON:0002619!4.98e-13!17;UBERON:0002021!3.32e-09!10;UBERON:0000411!3.32e-09!10;UBERON:0001950!3.32e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.65e-40,54;UBERON:0001017,2.31e-39,73;UBERON:0001049,3.82e-38,52;UBERON:0005068,3.82e-38,52;UBERON:0006241,3.82e-38,52;UBERON:0007135,3.82e-38,52;UBERON:0001016,1.29e-37,75;UBERON:0002346,3.43e-37,64;UBERON:0003075,3.43e-37,64;UBERON:0007284,3.43e-37,64;UBERON:0000955,2.04e-34,47;UBERON:0006238,2.04e-34,47;UBERON:0002616,1.94e-33,46;UBERON:0004121,8.21e-31,95;UBERON:0000924,8.21e-31,95;UBERON:0006601,8.21e-31,95;UBERON:0003080,1.46e-30,40;UBERON:0003056,6.70e-30,49;UBERON:0010371,1.13e-29,73;UBERON:0002780,1.22e-29,39;UBERON:0001890,1.22e-29,39;UBERON:0006240,1.22e-29,39;UBERON:0002020,1.64e-27,34;UBERON:0003528,4.71e-24,29;UBERON:0002791,4.71e-24,29;UBERON:0001893,4.71e-24,29;UBERON:0010314,7.20e-19,92;UBERON:0000956,9.74e-18,21;UBERON:0001869,9.74e-18,21;UBERON:0000203,9.74e-18,21;UBERON:0002619,1.98e-15,17;UBERON:0002021,8.31e-11,10;UBERON:0000411,8.31e-11,10;UBERON:0001950,8.31e-11,10;UBERON:0003076,8.61e-08,12;UBERON:0003057,8.61e-08,12;UBERON:0002420,2.05e-07,8;UBERON:0007245,2.05e-07,8;UBERON:0010009,2.05e-07,8;UBERON:0010011,2.05e-07,8;UBERON:0000454,2.05e-07,8;UBERON:0000025,4.58e-07,114
|phase1_expression=0,0.348975407639361,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,223.068550066256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,20.0583143870011,11.8630538676615,24.4981672833597,5.45947044338914,18.6878333674463,0,0,0,0,0,0,17.1968991730658,20.1016572123373,23.4517619297286,0,0.889294796111139,0,0,0,11.085204089181,38.4218305321555,7.56934169851887,7.02030879324791,7.78202357000113,28.8507494247842,47.2658677636453,20.2109818704674,22.1403038052126,25.7381260250806,246.659573438631,499.64055392734,374.031908478953,40.6209766208997,34.6738169253133,31.7757156039624,53.3239528092638,172.768121279726,277.787214458241,32.4091444021034,27.620106075026,8.38797506213853,0.227178579999552,0.68014404096107,0,0,0,0,0,0,37.0773269147825,0,0,0,0,0,0,0,0,0,0,25.3488212976313,0,0,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0,0,0,1.86391761218122,57.6778170112748,46.0782754989601,1.02182822083437,0,0,0,299.880860088455,1274.59667945269,77.2774265494116,2487.42602195148,2122.9497267564,542.950160434131,885.837296349957,0,0,0,4.41927897361595,0.910843100738926,0.459804208866946,1.80062129805349,1.35634336052144,1.97305847538851,1.5373646434182,3.27956035959051,13.7112786491678,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3083.06093589867,88.7037758709432,0,1.05780226665418,0,0,0,0.201683524623343,0.22237804384487,0.380451252225118,1.89811624617805,0.988193728344065,1.75934646160189,1.59165177632921,2.53453313254856,2.69645822596266,1.29682829924817,1.1948476395262,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,77.8670361440791,69.5065301491765,0,0,0.94652465824877,1.56175497718655,2.36965737506079,0.238968797952552,0,0.566153061577665,0,0.876767573733936,0.790575555893047,772.777765994446,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,10.8940673841212,5.40183282093931,5.17434735131018,3.21505552547388,7.44828981297549,13.0209236849512,11.6829804627506,23.1393361327095,0,0,0.882113592219848,0,0,0,0,0,2.33184669303881,83.2559606027188,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0.436725127492355,0.134864346384821,1.07449492442937,0.26175594198403,1.68499465279331,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.965947970160952,0,0,0,0,1778.96830424376,1848.20582457632,1696.91651080749,1899.83693080947,2570.42961417945,2853.87814433829,2376.07920081596,2399.31137077865,2431.56216660924,2550.48729568947,1.86817225651518,6.78342284781753,3.75613932659095,4.37592090722929,5.8691685535835,6.06683577885047,4.00044110042907,6.18105171716683,8.02298023979538,6.31743029409494,5.32306529769503,5.28153755881013,3.83930180626518,5.69823856403337,4.42253110958222,4.76293691283074,5.2147946675185,4.05109362973781,6.1812885120496,6.77115032618228,6.51451579532289,5.14679837862079,5.00715998889374,4.50573891560218,5.45834406408918,4.48457421825885,5.3049112133104,3.94604567156764,3.93831930152999,7.85599180320834,4.98267076121531,4.13718825977367,3.27384834535751,4.18329471202108,3.2794123866794,12.4905288968973,4.67863216890817,6.87587372954555,2.29545998482612,2.64709702943419,0.927471342481686
|phase1_expression=0,0.348975407639361,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,223.068550066256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,20.0583143870011,11.8630538676615,24.4981672833597,5.45947044338914,18.6878333674463,0,0,0,0,0,0,17.1968991730658,20.1016572123373,23.4517619297286,0,0.889294796111139,0,0,0,11.085204089181,38.4218305321555,7.56934169851887,7.02030879324791,7.78202357000113,28.8507494247842,47.2658677636453,20.2109818704674,22.1403038052126,25.7381260250806,246.659573438631,499.64055392734,374.031908478953,40.6209766208997,34.6738169253133,31.7757156039624,53.3239528092638,172.768121279726,277.787214458241,32.4091444021034,27.620106075026,8.38797506213853,0.227178579999552,0.68014404096107,0,0,0,0,0,0,37.0773269147825,0,0,0,0,0,0,0,0,0,0,25.3488212976313,0,0,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0,0,0,1.86391761218122,57.6778170112748,46.0782754989601,1.02182822083437,0,0,0,299.880860088455,1274.59667945269,77.2774265494116,2487.42602195148,2122.9497267564,542.950160434131,885.837296349957,0,0,0,4.41927897361595,0.910843100738926,0.459804208866946,1.80062129805349,1.35634336052144,1.97305847538851,1.5373646434182,3.27956035959051,13.7112786491678,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3083.06093589867,88.7037758709432,0,1.05780226665418,0,0,0,0.201683524623343,0.22237804384487,0.380451252225118,1.89811624617805,0.988193728344065,1.75934646160189,1.59165177632921,2.53453313254856,2.69645822596266,1.29682829924817,1.1948476395262,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,77.8670361440791,69.5065301491765,0,0,0.94652465824877,1.56175497718655,2.36965737506079,0.238968797952552,0,0.566153061577665,0,0.876767573733936,0.790575555893047,772.777765994446,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,10.8940673841212,5.40183282093931,5.17434735131018,3.21505552547388,7.44828981297549,13.0209236849512,11.6829804627506,23.1393361327095,0,0,0.882113592219848,0,0,0,0,0,2.33184669303881,83.2559606027188,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0.436725127492355,0.134864346384821,1.07449492442937,0.26175594198403,1.68499465279331,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.965947970160952,0,0,0,0,1778.96830424376,1848.20582457632,1696.91651080749,1899.83693080947,2570.42961417945,2853.87814433829,2376.07920081596,2399.31137077865,2431.56216660924,2550.48729568947,1.86817225651518,6.78342284781753,3.75613932659095,4.37592090722929,5.8691685535835,6.06683577885047,4.00044110042907,6.18105171716683,8.02298023979538,6.31743029409494,5.32306529769503,5.28153755881013,3.83930180626518,5.69823856403337,4.42253110958222,4.76293691283074,5.2147946675185,4.05109362973781,6.1812885120496,6.77115032618228,6.51451579532289,5.14679837862079,5.00715998889374,4.50573891560218,5.45834406408918,4.48457421825885,5.3049112133104,3.94604567156764,3.93831930152999,7.85599180320834,4.98267076121531,4.13718825977367,3.27384834535751,4.18329471202108,3.2794123866794,12.4905288968973,4.67863216890817,6.87587372954555,2.29545998482612,2.64709702943419,0.927471342481686
|short_description=p1@Camk2a
}}
}}

Latest revision as of 13:40, 1 October 2015

Short description:p1@Camk2a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Camk2a_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000025519, ENSMUST00000102888, ENSMUST00000134496, NM_177407, uc008fbf.1, uc008fbg.2_5end
EntrezGene:Camk2a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Camk2a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3223.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.06
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C324.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C317.20
Mouse Granule cells, donor2.CNhs12357.11731-123E320.10
Mouse Granule cells, donor3.CNhs12108.11636-122C723.45
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C811.09
Mouse Microglia, donor2.CNhs12634.11736-123E838.42
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F128.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D547.27
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.21
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.14
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3246.66
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3499.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7374.03
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D440.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F434.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E453.32
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5172.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6277.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D632.41
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.39
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A737.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B625.35
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B257.68
cerebellum, neonate N30.CNhs11135.1395-42I246.08
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4299.88
corpus striatum, adult.CNhs10487.19-21D81274.60
corpus striatum, neonate N00.CNhs11226.630-43F177.28
cortex, adult.CNhs10473.12-14D52487.43
cortex, neonate N30.CNhs11107.1392-42F22122.95
diencephalon, adult.CNhs10482.20-12F2542.95
diencephalon, neonate N30.CNhs11201.1388-42B2885.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A213.71
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83083.06
hippocampus, neonate N00.CNhs11228.627-43G188.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C277.87
medulla oblongata, neonate N30.CNhs11200.1396-42A369.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I9772.78
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F613.02
pituitary gland, embryo E17.CNhs11039.1265-44F511.68
pituitary gland, neonate N00.CNhs11190.1308-22E923.14
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C983.26
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11778.97
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21848.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31696.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71899.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42570.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52853.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62376.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72399.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82431.56
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92550.49
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.15e-1623
neuroblast (sensu Vertebrata)2.15e-1623
neural cell2.83e-1243
ectodermal cell9.72e-1244
neurectodermal cell9.72e-1244
neuron2.86e-1033
neuronal stem cell2.86e-1033
neuroblast2.86e-1033
electrically signaling cell2.86e-1033
electrically responsive cell2.10e-0739
electrically active cell2.10e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.65e-4054
central nervous system2.31e-3973
neural tube3.82e-3852
neural rod3.82e-3852
future spinal cord3.82e-3852
neural keel3.82e-3852
nervous system1.29e-3775
neurectoderm3.43e-3764
neural plate3.43e-3764
presumptive neural plate3.43e-3764
brain2.04e-3447
future brain2.04e-3447
regional part of brain1.94e-3346
ectoderm-derived structure8.21e-3195
ectoderm8.21e-3195
presumptive ectoderm8.21e-3195
anterior neural tube1.46e-3040
pre-chordal neural plate6.70e-3049
ecto-epithelium1.13e-2973
regional part of forebrain1.22e-2939
forebrain1.22e-2939
future forebrain1.22e-2939
gray matter1.64e-2734
brain grey matter4.71e-2429
regional part of telencephalon4.71e-2429
telencephalon4.71e-2429
structure with developmental contribution from neural crest7.20e-1992
cerebral cortex9.74e-1821
cerebral hemisphere9.74e-1821
pallium9.74e-1821
regional part of cerebral cortex1.98e-1517
occipital lobe8.31e-1110
visual cortex8.31e-1110
neocortex8.31e-1110
posterior neural tube8.61e-0812
chordal neural plate8.61e-0812
basal ganglion2.05e-078
nuclear complex of neuraxis2.05e-078
aggregate regional part of brain2.05e-078
collection of basal ganglia2.05e-078
cerebral subcortex2.05e-078
tube4.58e-07114
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