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FFCP PHASE1:Mm9::chr18:35374662..35374687,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:35374662..35374687,-
|DHSsupport=NA
|short_description=p1@Lrrtm2
|DPIdataset=NA
|description=CAGE_peak_1_at_Lrrtm2_5end
|association_with_transcript=0bp_to_ENSMUST00000091636,NM_178005,uc008ema.1_5end
|EntrezGene=107065
|EntrezGene=107065
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BGA3,Q8C8L1
|UniProt=Q8BGA3,Q8C8L1
|association_with_transcript=0bp_to_ENSMUST00000091636,NM_178005,uc008ema.1_5end
|cluster_id=chr18:35374662..35374687,-
|description=CAGE_peak_1_at_Lrrtm2_5end
|id=chr18:35374662..35374687,-
|ontology_enrichment_celltype=CL:0000540!1.52e-15!33;CL:0000047!1.52e-15!33;CL:0000031!1.52e-15!33;CL:0000404!1.52e-15!33;CL:0000117!4.45e-15!23;CL:0000337!4.45e-15!23;CL:0000221!3.16e-12!44;CL:0000133!3.16e-12!44;CL:0002319!4.56e-12!43;CL:0000393!4.00e-11!39;CL:0000211!4.00e-11!39;CL:0000055!1.58e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.04e-20,23;CL:0000337,1.04e-20,23;CL:0000540,1.90e-15,33;CL:0000047,1.90e-15,33;CL:0000031,1.90e-15,33;CL:0000404,1.90e-15,33;CL:0000393,8.54e-12,39;CL:0000211,8.54e-12,39;CL:0002319,6.79e-11,43;CL:0000221,1.84e-10,44;CL:0000133,1.84e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.31e-31!75;UBERON:0001016!8.31e-31!75;UBERON:0001017!6.06e-30!73;UBERON:0005743!6.06e-30!73;UBERON:0004121!5.88e-28!102;UBERON:0000924!5.88e-28!102;UBERON:0006601!5.88e-28!102;UBERON:0002346!2.38e-26!71;UBERON:0003075!2.38e-26!71;UBERON:0007284!2.38e-26!71;UBERON:0000033!9.48e-26!63;UBERON:0001049!1.50e-24!52;UBERON:0005068!1.50e-24!52;UBERON:0006241!1.50e-24!52;UBERON:0007135!1.50e-24!52;UBERON:0000955!4.42e-24!50;UBERON:0006238!4.42e-24!50;UBERON:0002616!2.69e-23!49;UBERON:0003056!2.11e-22!49;UBERON:0002020!9.18e-21!34;UBERON:0003080!1.09e-19!40;UBERON:0002780!6.14e-19!39;UBERON:0001890!6.14e-19!39;UBERON:0006240!6.14e-19!39;UBERON:0002791!7.88e-18!29;UBERON:0003528!7.88e-18!29;UBERON:0001893!7.88e-18!29;UBERON:0007811!1.97e-14!86;UBERON:0000956!1.47e-12!21;UBERON:0001869!1.47e-12!21;UBERON:0000203!1.47e-12!21;UBERON:0000153!2.55e-12!94;UBERON:0002619!3.78e-10!17;UBERON:0002021!1.34e-09!10;UBERON:0000411!1.34e-09!10;UBERON:0001950!1.34e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.85e-35,54;UBERON:0001016,8.08e-33,75;UBERON:0001017,8.20e-33,73;UBERON:0001049,1.27e-32,52;UBERON:0005068,1.27e-32,52;UBERON:0006241,1.27e-32,52;UBERON:0007135,1.27e-32,52;UBERON:0002346,2.14e-32,64;UBERON:0003075,2.14e-32,64;UBERON:0007284,2.14e-32,64;UBERON:0002020,1.68e-29,34;UBERON:0004121,2.60e-29,95;UBERON:0000924,2.60e-29,95;UBERON:0006601,2.60e-29,95;UBERON:0000955,2.33e-28,47;UBERON:0006238,2.33e-28,47;UBERON:0002616,2.73e-27,46;UBERON:0003056,4.78e-27,49;UBERON:0010371,2.62e-26,73;UBERON:0003528,2.51e-25,29;UBERON:0002791,2.51e-25,29;UBERON:0001893,2.51e-25,29;UBERON:0003080,4.17e-25,40;UBERON:0002780,4.59e-24,39;UBERON:0001890,4.59e-24,39;UBERON:0006240,4.59e-24,39;UBERON:0000956,8.13e-18,21;UBERON:0001869,8.13e-18,21;UBERON:0000203,8.13e-18,21;UBERON:0010314,1.74e-17,92;UBERON:0002619,2.16e-14,17;UBERON:0002021,6.01e-13,10;UBERON:0000411,6.01e-13,10;UBERON:0001950,6.01e-13,10;UBERON:0002420,1.37e-08,8;UBERON:0007245,1.37e-08,8;UBERON:0010009,1.37e-08,8;UBERON:0010011,1.37e-08,8;UBERON:0000454,1.37e-08,8;UBERON:0003076,8.54e-08,12;UBERON:0003057,8.54e-08,12;UBERON:0000025,2.80e-07,114
|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,5.01755411891312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,4.7609188134483,5.07065122804943,0,0,0,0,0,0.299600110518405,0.384218305321555,5.39185984004084,4.45519596494579,3.57552434297349,1.71390590642282,4.19650227808066,6.1245399607477,2.77951865952885,3.67687514644008,29.731287869835,30.6449611404451,32.4109785170674,5.27545150920775,6.03818447775904,5.73004707612436,8.37548997004143,8.4414391504752,14.3630352910202,8.54422897873636,10.1083893367363,6.89677949553612,0.908714319998209,2.26714680320357,0,0,0,0,0,0,1.26399978118577,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,16.9812862266697,10.8912287542997,0,0.239630249011841,0,0,17.0761328921498,16.0125210986519,14.9528679014309,25.5521750682646,23.7815375317207,31.168206683934,24.6606719862992,0,0,0,0.631325567659422,0,0.459804208866946,2.16074555766419,3.0140963567143,2.65342346690179,5.25266253167884,3.84177070694888,3.88055056108524,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9260953707715,11.7311258112384,0,0,0.213288250535234,0,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,10.1146871692309,11.3695335994437,0,0,0.315508219416257,0,0.861693590931196,0.238968797952552,1.11399337041197,0.566153061577665,1.21443210502468,0.292255857911312,2.37172666767914,17.9939937196212,0.141940085208269,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,3.40439605753788,0.540183282093931,0,0,0.532020700926821,1.78368817602071,1.48094118541909,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,10.3838169125885,0,0,0,0,0,0,1.35982743995084,0.979660166265606,1.10559979043539,0,0.158167996790568,0.203319467126849,0.540026704109006,0.209088296014469,0.436725127492355,0.539457385539283,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,35.5793660848752,46.4928488872249,41.2484769676366,42.9632955859219,27.4033007908257,29.4603619981983,27.675922509504,29.2708782095743,31.7199686288943,25.3702552758392,0.207574695168353,0.798049746802062,1.02440163452481,1.21553358534147,0.838452650511929,1.2869045591501,2.00022055021454,1.03017528619447,2.88827288632634,1.51618327058278,1.77435509923168,1.88626341386076,2.71560371662659,2.4969809437899,2.52716063404698,2.38146845641537,1.97003354106254,2.50781986602817,0.824171801606613,1.76638704161277,0.685738504770831,0.887379030796687,3.09967046931517,2.18019624948493,1.88218760830661,1.35383372626682,1.64635175585495,0.789209134313529,1.35804113845862,0.561142271657738,1.77952527186261,1.57607171800902,2.86461730218783,0.619747364743864,2.3148793317737,3.49734809113124,2.10538447600868,2.36358159453128,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,5.01755411891312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,4.7609188134483,5.07065122804943,0,0,0,0,0,0.299600110518405,0.384218305321555,5.39185984004084,4.45519596494579,3.57552434297349,1.71390590642282,4.19650227808066,6.1245399607477,2.77951865952885,3.67687514644008,29.731287869835,30.6449611404451,32.4109785170674,5.27545150920775,6.03818447775904,5.73004707612436,8.37548997004143,8.4414391504752,14.3630352910202,8.54422897873636,10.1083893367363,6.89677949553612,0.908714319998209,2.26714680320357,0,0,0,0,0,0,1.26399978118577,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,16.9812862266697,10.8912287542997,0,0.239630249011841,0,0,17.0761328921498,16.0125210986519,14.9528679014309,25.5521750682646,23.7815375317207,31.168206683934,24.6606719862992,0,0,0,0.631325567659422,0,0.459804208866946,2.16074555766419,3.0140963567143,2.65342346690179,5.25266253167884,3.84177070694888,3.88055056108524,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9260953707715,11.7311258112384,0,0,0.213288250535234,0,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,10.1146871692309,11.3695335994437,0,0,0.315508219416257,0,0.861693590931196,0.238968797952552,1.11399337041197,0.566153061577665,1.21443210502468,0.292255857911312,2.37172666767914,17.9939937196212,0.141940085208269,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,3.40439605753788,0.540183282093931,0,0,0.532020700926821,1.78368817602071,1.48094118541909,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,10.3838169125885,0,0,0,0,0,0,1.35982743995084,0.979660166265606,1.10559979043539,0,0.158167996790568,0.203319467126849,0.540026704109006,0.209088296014469,0.436725127492355,0.539457385539283,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,35.5793660848752,46.4928488872249,41.2484769676366,42.9632955859219,27.4033007908257,29.4603619981983,27.675922509504,29.2708782095743,31.7199686288943,25.3702552758392,0.207574695168353,0.798049746802062,1.02440163452481,1.21553358534147,0.838452650511929,1.2869045591501,2.00022055021454,1.03017528619447,2.88827288632634,1.51618327058278,1.77435509923168,1.88626341386076,2.71560371662659,2.4969809437899,2.52716063404698,2.38146845641537,1.97003354106254,2.50781986602817,0.824171801606613,1.76638704161277,0.685738504770831,0.887379030796687,3.09967046931517,2.18019624948493,1.88218760830661,1.35383372626682,1.64635175585495,0.789209134313529,1.35804113845862,0.561142271657738,1.77952527186261,1.57607171800902,2.86461730218783,0.619747364743864,2.3148793317737,3.49734809113124,2.10538447600868,2.36358159453128,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p1@Lrrtm2
}}
}}

Latest revision as of 04:40, 27 September 2015

Short description:p1@Lrrtm2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrtm2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000091636, NM_178005, uc008ema.1_5end
EntrezGene:Lrrtm2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrrtm2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F330.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.90
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I210.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.08
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F114.95
cortex, adult.CNhs10473.12-14D525.55
cortex, neonate N30.CNhs11107.1392-42F223.78
diencephalon, adult.CNhs10482.20-12F231.17
diencephalon, neonate N30.CNhs11201.1388-42B224.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E818.93
hippocampus, neonate N00.CNhs11228.627-43G111.73
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.11
medulla oblongata, neonate N30.CNhs11200.1396-42A311.37
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A246.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D742.96
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.27
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.04e-2023
neuroblast (sensu Vertebrata)1.04e-2023
neuron1.90e-1533
neuronal stem cell1.90e-1533
neuroblast1.90e-1533
electrically signaling cell1.90e-1533
electrically responsive cell8.54e-1239
electrically active cell8.54e-1239
neural cell6.79e-1143
ectodermal cell1.84e-1044
neurectodermal cell1.84e-1044

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.85e-3554
nervous system8.08e-3375
central nervous system8.20e-3373
neural tube1.27e-3252
neural rod1.27e-3252
future spinal cord1.27e-3252
neural keel1.27e-3252
neurectoderm2.14e-3264
neural plate2.14e-3264
presumptive neural plate2.14e-3264
gray matter1.68e-2934
ectoderm-derived structure2.60e-2995
ectoderm2.60e-2995
presumptive ectoderm2.60e-2995
brain2.33e-2847
future brain2.33e-2847
regional part of brain2.73e-2746
pre-chordal neural plate4.78e-2749
ecto-epithelium2.62e-2673
brain grey matter2.51e-2529
regional part of telencephalon2.51e-2529
telencephalon2.51e-2529
anterior neural tube4.17e-2540
regional part of forebrain4.59e-2439
forebrain4.59e-2439
future forebrain4.59e-2439
cerebral cortex8.13e-1821
cerebral hemisphere8.13e-1821
pallium8.13e-1821
structure with developmental contribution from neural crest1.74e-1792
regional part of cerebral cortex2.16e-1417
occipital lobe6.01e-1310
visual cortex6.01e-1310
neocortex6.01e-1310
basal ganglion1.37e-088
nuclear complex of neuraxis1.37e-088
aggregate regional part of brain1.37e-088
collection of basal ganglia1.37e-088
cerebral subcortex1.37e-088
posterior neural tube8.54e-0812
chordal neural plate8.54e-0812
tube2.80e-07114
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