FFCP PHASE1:Mm9::chr18:3382977..3383063,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:3382977..3383063,+
|short_description=p2@Cul2
|description=CAGE_peak_2_at_Cul2_5end
|association_with_transcript=0bp_to_ENSMUST00000025073,uc008dxz.2_5end...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71745 | |EntrezGene=71745 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D4H8 | |UniProt=Q9D4H8 | ||
|association_with_transcript=0bp_to_ENSMUST00000025073,uc008dxz.2_5end | |||
|cluster_id=chr18:3382977..3383063,+ | |||
|description=CAGE_peak_2_at_Cul2_5end | |||
|id=chr18:3382977..3383063,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.41e-09!33;CL:0000047!1.41e-09!33;CL:0000031!1.41e-09!33;CL:0000404!1.41e-09!33;CL:0000117!5.09e-08!23;CL:0000337!5.09e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.41e-09,33;CL:0000047,1.41e-09,33;CL:0000031,1.41e-09,33;CL:0000404,1.41e-09,33;CL:0000117,5.09e-08,23;CL:0000337,5.09e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.00e-13!75;UBERON:0001016!7.00e-13!75;UBERON:0001017!1.43e-12!73;UBERON:0005743!1.43e-12!73;UBERON:0002346!2.58e-12!71;UBERON:0003075!2.58e-12!71;UBERON:0007284!2.58e-12!71;UBERON:0002020!3.60e-12!34;UBERON:0004121!1.64e-11!102;UBERON:0000924!1.64e-11!102;UBERON:0006601!1.64e-11!102;UBERON:0001049!2.36e-11!52;UBERON:0005068!2.36e-11!52;UBERON:0006241!2.36e-11!52;UBERON:0007135!2.36e-11!52;UBERON:0000033!5.64e-11!63;UBERON:0000955!1.55e-10!50;UBERON:0006238!1.55e-10!50;UBERON:0002616!4.75e-10!49;UBERON:0002791!1.57e-09!29;UBERON:0003528!1.57e-09!29;UBERON:0001893!1.57e-09!29;UBERON:0003056!6.74e-09!49;UBERON:0003080!5.36e-08!40;UBERON:0002021!1.47e-07!10;UBERON:0000411!1.47e-07!10;UBERON:0001950!1.47e-07!10;UBERON:0002780!1.68e-07!39;UBERON:0001890!1.68e-07!39;UBERON:0006240!1.68e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.21e-13,64;UBERON:0003075,6.21e-13,64;UBERON:0007284,6.21e-13,64;UBERON:0001016,7.26e-13,75;UBERON:0001017,1.48e-12,73;UBERON:0000073,1.65e-12,54;UBERON:0002020,3.74e-12,34;UBERON:0004121,9.55e-12,95;UBERON:0000924,9.55e-12,95;UBERON:0006601,9.55e-12,95;UBERON:0001049,2.43e-11,52;UBERON:0005068,2.43e-11,52;UBERON:0006241,2.43e-11,52;UBERON:0007135,2.43e-11,52;UBERON:0010314,8.33e-11,92;UBERON:0010371,1.05e-10,73;UBERON:0003528,1.63e-09,29;UBERON:0002791,1.63e-09,29;UBERON:0001893,1.63e-09,29;UBERON:0000955,6.38e-09,47;UBERON:0006238,6.38e-09,47;UBERON:0003056,6.92e-09,49;UBERON:0002616,1.85e-08,46;UBERON:0003080,5.51e-08,40;UBERON:0002021,1.47e-07,10;UBERON:0000411,1.47e-07,10;UBERON:0001950,1.47e-07,10;UBERON:0002780,1.72e-07,39;UBERON:0001890,1.72e-07,39;UBERON:0006240,1.72e-07,39 | |||
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| ||
|short_description=p2@Cul2 | |||
}} | }} |
Latest revision as of 03:59, 27 September 2015
Short description: | p2@Cul2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cul2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000025073, uc008dxz.2_5end |
EntrezGene: | Cul2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.41e-09 | 33 |
neuronal stem cell | 1.41e-09 | 33 |
neuroblast | 1.41e-09 | 33 |
electrically signaling cell | 1.41e-09 | 33 |
CNS neuron (sensu Vertebrata) | 5.09e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.09e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 6.21e-13 | 64 |
neural plate | 6.21e-13 | 64 |
presumptive neural plate | 6.21e-13 | 64 |
nervous system | 7.26e-13 | 75 |
central nervous system | 1.48e-12 | 73 |
regional part of nervous system | 1.65e-12 | 54 |
gray matter | 3.74e-12 | 34 |
ectoderm-derived structure | 9.55e-12 | 95 |
ectoderm | 9.55e-12 | 95 |
presumptive ectoderm | 9.55e-12 | 95 |
neural tube | 2.43e-11 | 52 |
neural rod | 2.43e-11 | 52 |
future spinal cord | 2.43e-11 | 52 |
neural keel | 2.43e-11 | 52 |
structure with developmental contribution from neural crest | 8.33e-11 | 92 |
ecto-epithelium | 1.05e-10 | 73 |
brain grey matter | 1.63e-09 | 29 |
regional part of telencephalon | 1.63e-09 | 29 |
telencephalon | 1.63e-09 | 29 |
brain | 6.38e-09 | 47 |
future brain | 6.38e-09 | 47 |
pre-chordal neural plate | 6.92e-09 | 49 |
regional part of brain | 1.85e-08 | 46 |
anterior neural tube | 5.51e-08 | 40 |
occipital lobe | 1.47e-07 | 10 |
visual cortex | 1.47e-07 | 10 |
neocortex | 1.47e-07 | 10 |
regional part of forebrain | 1.72e-07 | 39 |
forebrain | 1.72e-07 | 39 |
future forebrain | 1.72e-07 | 39 |