FFCP PHASE1:Mm9::chr18:33623269..33623284,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:33623269..33623284,-
|short_description=p2@D0H4S114
|description=CAGE_peak_2_at_D0H4S114_5end
|association_with_transcript=3bp_to_ENSMUST00000051087,NM_05...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27528 | |EntrezGene=27528 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q07475,Q542Q5 | |UniProt=Q07475,Q542Q5 | ||
|association_with_transcript=3bp_to_ENSMUST00000051087,NM_053078,uc008ejt.2_5end | |||
|cluster_id=chr18:33623269..33623284,- | |||
|description=CAGE_peak_2_at_D0H4S114_5end | |||
|id=chr18:33623269..33623284,- | |||
|ontology_enrichment_celltype=CL:0000540!5.54e-10!33;CL:0000047!5.54e-10!33;CL:0000031!5.54e-10!33;CL:0000404!5.54e-10!33;CL:0000117!1.99e-08!23;CL:0000337!1.99e-08!23;CL:0000221!5.73e-07!44;CL:0000133!5.73e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.39e-10,33;CL:0000047,4.39e-10,33;CL:0000031,4.39e-10,33;CL:0000404,4.39e-10,33;CL:0000117,1.65e-08,23;CL:0000337,1.65e-08,23;CL:0000221,9.31e-07,44;CL:0000133,9.31e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.67e-11!333;UBERON:0001017!2.54e-10!73;UBERON:0005743!2.54e-10!73;UBERON:0000073!1.37e-09!75;UBERON:0001016!1.37e-09!75;UBERON:0002346!3.36e-09!71;UBERON:0003075!3.36e-09!71;UBERON:0007284!3.36e-09!71;UBERON:0004121!3.90e-09!102;UBERON:0000924!3.90e-09!102;UBERON:0006601!3.90e-09!102;UBERON:0002020!2.42e-08!34;UBERON:0001049!3.06e-08!52;UBERON:0005068!3.06e-08!52;UBERON:0006241!3.06e-08!52;UBERON:0007135!3.06e-08!52;UBERON:0000922!6.77e-08!328;UBERON:0003056!5.43e-07!49;UBERON:0000033!6.48e-07!63;UBERON:0000479!9.20e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.71e-10,73;UBERON:0010371,6.22e-10,73;UBERON:0002346,7.89e-10,64;UBERON:0003075,7.89e-10,64;UBERON:0007284,7.89e-10,64;UBERON:0001016,2.04e-09,75;UBERON:0004121,2.08e-09,95;UBERON:0000924,2.08e-09,95;UBERON:0006601,2.08e-09,95;UBERON:0010314,8.98e-09,92;UBERON:0002020,2.92e-08,34;UBERON:0001049,3.47e-08,52;UBERON:0005068,3.47e-08,52;UBERON:0006241,3.47e-08,52;UBERON:0007135,3.47e-08,52;UBERON:0000922,5.70e-08,320;UBERON:0000073,6.98e-08,54;UBERON:0003056,6.24e-07,49 | |||
|phase1_expression=88.8826101431606,0,0,0,0,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,7.14363637268986,0,0,0.639969691173627,0.91763712426868,0.57423196411502,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,1.56478268869608,10.247182349881,0.659058548203415,1.1665793944457,1.1198913730029,8.62515386189829,0,0,0,4.3734104126111,0.573066879877513,1.03134418455488,84.5682806393119,90.9864484347897,100.779193157482,0.677689064138264,0,0,0,1.4209602298922,4.79360176829448,14.6002956022191,109.910989046986,105.709649713714,101.586956332718,59.9867067247988,70.6779331045163,133.882443541945,147.410334426048,170.055475522854,3.30347642998166,6.2566795661742,6.45147439676223,84.1434515718637,100.727895606253,89.076186365206,11.4465029590566,1.12552522006336,5.04234217663473,57.7472027528389,72.7519288883416,105.12928744547,0.832988126665025,1.36028808192214,4.34796733052517,2.58127163094416,0,0.539703191637817,4.54843492213368,3.13618820968135,4.91555470461132,1.36344258062446,1.55871602761721,2.12003744706204,76.6188203585142,8.98285341900225,0,0,0,0,0,1.82694207550496,0,0.742210695324124,18.5629299639765,12.1786191324856,10.8389283710347,11.1534754008941,11.2885158850277,5.15233024451669,1.97755974187499,0.86759614151947,1.76922110389975,26.3679965414277,7.72945314611377,12.6067565815158,0,182.695217335205,209.446706813455,0.510914110417183,0,0,0,4.94309110035915,6.8625090422794,61.5706325353036,11.298580812498,14.8314965251592,2.90903262383384,3.89379031362618,30.4499697912446,3.6078021476927,0.758168275301024,2.31486041475121,16.1349349273753,34.2554135605875,32.4111833649629,20.7972648613287,17.8255627776479,27.5444498612427,42.8216881237961,11.3829483125167,13.1496475689034,41.6033376369202,44.5156344134791,45.8119080773631,27.2486304241086,50.4965641457142,30.2499740519677,36.4232708277843,0,0,0,13.0489236697366,17.5894544985822,23.0479438670099,35.985199808952,18.495837784256,17.123649530499,10.4640275137684,9.12129564758705,8.64063533517054,14.6458266422998,23.8042822914688,8.18794976413143,5.11699955988663,2.63460138349261,2.14730270016595,5.46753866266731,160.016672249787,0,1.05780226665418,23.4617075588757,31.8164240448801,29.3817811814373,23.1936053316844,22.9049385160216,19.7834651157062,3.79623249235609,6.0938613247884,12.3154252312132,11.5394753783867,12.0877734013854,1.79763881730844,2.16138049874694,1.39398891278057,45.5202962287396,24.5634302110917,42.8289395557706,21.383389423758,23.4682509472827,20.0588444886311,55.0790238352281,6.6424566590821,6.90794402502049,1.72756029490521,4.15033677922008,5.6727335943472,4.52085688760367,1.12431056192427,1.82574109249653,0.482354319504834,6.62027214631691,7.19240343627027,0.648540907100142,1.92192989231657,20.1275489138296,4.83783231969054,6.55279113540577,0.505157755894224,1.25578189465339,0,6.46636165583116,78.6389358847512,111.79397383923,72.3114065402302,76.0396404454747,114.40677383276,91.6468017411153,31.4165173051056,79.6057477736264,90.5790580663489,104.921237776627,27.8567635016755,28.4930220078728,11.7165737451024,0,0,1.96705709207614,2.75936746304733,6.10092241953609,4.57125577709592,0.163934945376675,13.1284882146274,28.7112479668794,32.0159770323244,29.7284288871263,21.2682230177771,20.4974780155803,18.1168979704853,23.074209995469,27.4720506436633,25.693705566524,11.8888887076069,5.10984306749767,41.4892856544705,33.7176005861903,5.27904393512113,0,18.9368896200886,14.2092071773433,11.5049098651098,14.7650946440386,17.8312385807478,6.71913562237375,12.7236805317127,9.9819265947722,4.10847785316561,0,3.09406629744561,5.44703369206061,30.6103859853227,31.6928775267749,29.3641737993281,38.6601709340156,21.7609957474526,19.087686389846,9.43841342255258,0.469343416127421,1.27099242518292,0.220528398054962,5.27636009412736,18.5684090700291,12.3038366853438,10.9822556482886,7.2221995887827,2.91480836629851,4.07935664423121,0,28.6877746468879,19.8158144285592,4.1441060541032,0.683471138605126,0.915112692826091,0.169978429993855,0,0,2.86401185404534,40.0165031880136,40.0539350239892,23.0051375950437,18.6088583452877,12.6650286972783,10.1148259788616,13.7204736504058,3.40282724579238,1.68499465279331,0,0,25.5673293735204,27.3006509254211,25.0842032963821,25.444485225113,26.1881994510706,23.4714477291508,14.3224823328345,5.34782656571125,0,2.59227005632079,0,11.9607877021197,6.7789231728786,3.11809975146708,3.40150721768215,2.98022032171897,1.80293174279953,1.62458479892035,1.51449674922221,0.914481679859998,0.504130925684203,0.487289403698762,0.192423683280659,0,3.40095575422817,0,0,0,1.15913756419314,1.68914227906064,4.2124873581471,2.35805216986972,0.501572104035363,41.7916363536629,45.5721984142105,39.5297904273184,31.9646919159259,19.8673930733486,18.1294535373528,16.8755625057951,21.1650965515384,14.9536994964788,15.5328093525546,19.2006593030727,41.8976117071083,40.9760653809922,42.0574620528149,41.0841798750845,41.1809458928032,40.2266577320924,39.7647660471066,28.2408904440797,29.5655737763643,34.2197054851824,39.4229053496899,32.1190370621697,33.4211295553418,34.9207651250129,35.2457331549475,30.2458090716073,31.6371121560476,46.5657067907736,51.3724231269047,37.0298792576249,34.2528305887521,30.5198323132571,34.3017543252295,38.5848459702855,29.022810506845,31.8294672798624,46.3002692130603,31.0991420707023,52.1862312641697,36.5395855822456,31.5214343601803,37.6492559716114,34.0861050609125,34.9160965875866,57.4564329257276,34.6218780499204,30.941431782955,34.240611440323,31.9857557723297,32.6933648224794 | |phase1_expression=88.8826101431606,0,0,0,0,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,7.14363637268986,0,0,0.639969691173627,0.91763712426868,0.57423196411502,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,1.56478268869608,10.247182349881,0.659058548203415,1.1665793944457,1.1198913730029,8.62515386189829,0,0,0,4.3734104126111,0.573066879877513,1.03134418455488,84.5682806393119,90.9864484347897,100.779193157482,0.677689064138264,0,0,0,1.4209602298922,4.79360176829448,14.6002956022191,109.910989046986,105.709649713714,101.586956332718,59.9867067247988,70.6779331045163,133.882443541945,147.410334426048,170.055475522854,3.30347642998166,6.2566795661742,6.45147439676223,84.1434515718637,100.727895606253,89.076186365206,11.4465029590566,1.12552522006336,5.04234217663473,57.7472027528389,72.7519288883416,105.12928744547,0.832988126665025,1.36028808192214,4.34796733052517,2.58127163094416,0,0.539703191637817,4.54843492213368,3.13618820968135,4.91555470461132,1.36344258062446,1.55871602761721,2.12003744706204,76.6188203585142,8.98285341900225,0,0,0,0,0,1.82694207550496,0,0.742210695324124,18.5629299639765,12.1786191324856,10.8389283710347,11.1534754008941,11.2885158850277,5.15233024451669,1.97755974187499,0.86759614151947,1.76922110389975,26.3679965414277,7.72945314611377,12.6067565815158,0,182.695217335205,209.446706813455,0.510914110417183,0,0,0,4.94309110035915,6.8625090422794,61.5706325353036,11.298580812498,14.8314965251592,2.90903262383384,3.89379031362618,30.4499697912446,3.6078021476927,0.758168275301024,2.31486041475121,16.1349349273753,34.2554135605875,32.4111833649629,20.7972648613287,17.8255627776479,27.5444498612427,42.8216881237961,11.3829483125167,13.1496475689034,41.6033376369202,44.5156344134791,45.8119080773631,27.2486304241086,50.4965641457142,30.2499740519677,36.4232708277843,0,0,0,13.0489236697366,17.5894544985822,23.0479438670099,35.985199808952,18.495837784256,17.123649530499,10.4640275137684,9.12129564758705,8.64063533517054,14.6458266422998,23.8042822914688,8.18794976413143,5.11699955988663,2.63460138349261,2.14730270016595,5.46753866266731,160.016672249787,0,1.05780226665418,23.4617075588757,31.8164240448801,29.3817811814373,23.1936053316844,22.9049385160216,19.7834651157062,3.79623249235609,6.0938613247884,12.3154252312132,11.5394753783867,12.0877734013854,1.79763881730844,2.16138049874694,1.39398891278057,45.5202962287396,24.5634302110917,42.8289395557706,21.383389423758,23.4682509472827,20.0588444886311,55.0790238352281,6.6424566590821,6.90794402502049,1.72756029490521,4.15033677922008,5.6727335943472,4.52085688760367,1.12431056192427,1.82574109249653,0.482354319504834,6.62027214631691,7.19240343627027,0.648540907100142,1.92192989231657,20.1275489138296,4.83783231969054,6.55279113540577,0.505157755894224,1.25578189465339,0,6.46636165583116,78.6389358847512,111.79397383923,72.3114065402302,76.0396404454747,114.40677383276,91.6468017411153,31.4165173051056,79.6057477736264,90.5790580663489,104.921237776627,27.8567635016755,28.4930220078728,11.7165737451024,0,0,1.96705709207614,2.75936746304733,6.10092241953609,4.57125577709592,0.163934945376675,13.1284882146274,28.7112479668794,32.0159770323244,29.7284288871263,21.2682230177771,20.4974780155803,18.1168979704853,23.074209995469,27.4720506436633,25.693705566524,11.8888887076069,5.10984306749767,41.4892856544705,33.7176005861903,5.27904393512113,0,18.9368896200886,14.2092071773433,11.5049098651098,14.7650946440386,17.8312385807478,6.71913562237375,12.7236805317127,9.9819265947722,4.10847785316561,0,3.09406629744561,5.44703369206061,30.6103859853227,31.6928775267749,29.3641737993281,38.6601709340156,21.7609957474526,19.087686389846,9.43841342255258,0.469343416127421,1.27099242518292,0.220528398054962,5.27636009412736,18.5684090700291,12.3038366853438,10.9822556482886,7.2221995887827,2.91480836629851,4.07935664423121,0,28.6877746468879,19.8158144285592,4.1441060541032,0.683471138605126,0.915112692826091,0.169978429993855,0,0,2.86401185404534,40.0165031880136,40.0539350239892,23.0051375950437,18.6088583452877,12.6650286972783,10.1148259788616,13.7204736504058,3.40282724579238,1.68499465279331,0,0,25.5673293735204,27.3006509254211,25.0842032963821,25.444485225113,26.1881994510706,23.4714477291508,14.3224823328345,5.34782656571125,0,2.59227005632079,0,11.9607877021197,6.7789231728786,3.11809975146708,3.40150721768215,2.98022032171897,1.80293174279953,1.62458479892035,1.51449674922221,0.914481679859998,0.504130925684203,0.487289403698762,0.192423683280659,0,3.40095575422817,0,0,0,1.15913756419314,1.68914227906064,4.2124873581471,2.35805216986972,0.501572104035363,41.7916363536629,45.5721984142105,39.5297904273184,31.9646919159259,19.8673930733486,18.1294535373528,16.8755625057951,21.1650965515384,14.9536994964788,15.5328093525546,19.2006593030727,41.8976117071083,40.9760653809922,42.0574620528149,41.0841798750845,41.1809458928032,40.2266577320924,39.7647660471066,28.2408904440797,29.5655737763643,34.2197054851824,39.4229053496899,32.1190370621697,33.4211295553418,34.9207651250129,35.2457331549475,30.2458090716073,31.6371121560476,46.5657067907736,51.3724231269047,37.0298792576249,34.2528305887521,30.5198323132571,34.3017543252295,38.5848459702855,29.022810506845,31.8294672798624,46.3002692130603,31.0991420707023,52.1862312641697,36.5395855822456,31.5214343601803,37.6492559716114,34.0861050609125,34.9160965875866,57.4564329257276,34.6218780499204,30.941431782955,34.240611440323,31.9857557723297,32.6933648224794 | ||
|short_description=p2@D0H4S114 | |||
}} | }} |
Latest revision as of 03:57, 27 September 2015
Short description: | p2@D0H4S114 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_D0H4S114_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENSMUST00000051087, NM_053078, uc008ejt.2_5end |
EntrezGene: | D0H4S114 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.39e-10 | 33 |
neuronal stem cell | 4.39e-10 | 33 |
neuroblast | 4.39e-10 | 33 |
electrically signaling cell | 4.39e-10 | 33 |
CNS neuron (sensu Vertebrata) | 1.65e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-08 | 23 |
ectodermal cell | 9.31e-07 | 44 |
neurectodermal cell | 9.31e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.71e-10 | 73 |
ecto-epithelium | 6.22e-10 | 73 |
neurectoderm | 7.89e-10 | 64 |
neural plate | 7.89e-10 | 64 |
presumptive neural plate | 7.89e-10 | 64 |
nervous system | 2.04e-09 | 75 |
ectoderm-derived structure | 2.08e-09 | 95 |
ectoderm | 2.08e-09 | 95 |
presumptive ectoderm | 2.08e-09 | 95 |
structure with developmental contribution from neural crest | 8.98e-09 | 92 |
gray matter | 2.92e-08 | 34 |
neural tube | 3.47e-08 | 52 |
neural rod | 3.47e-08 | 52 |
future spinal cord | 3.47e-08 | 52 |
neural keel | 3.47e-08 | 52 |
embryo | 5.70e-08 | 320 |
regional part of nervous system | 6.98e-08 | 54 |
pre-chordal neural plate | 6.24e-07 | 49 |