FFCP PHASE1:Mm9::chr17:35960370..35960381,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:35960370..35960381,+
|short_description=p4@Flot1
|description=CAGE_peak_4_at_Flot1_5end
|association_with_transcript=0bp_to_ENSMUST00000174227_5end
|Entr...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14251 | |EntrezGene=14251 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3097 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000174227_5end | |||
|cluster_id=chr17:35960370..35960381,+ | |||
|description=CAGE_peak_4_at_Flot1_5end | |||
|id=chr17:35960370..35960381,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.33e-13!50;CL:0002319!2.17e-11!43;CL:0000221!4.62e-11!44;CL:0000133!4.62e-11!44;CL:0000393!6.72e-09!39;CL:0000211!6.72e-09!39;CL:0000333!1.68e-07!10;CL:0000095!1.68e-07!10;CL:0000243!1.68e-07!10;CL:0000123!1.68e-07!10;CL:0000125!1.68e-07!10;CL:0000030!1.68e-07!10;CL:0000339!1.68e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.22e-20,43;CL:0000221,4.04e-19,44;CL:0000133,4.04e-19,44;CL:0002321,2.19e-15,70;CL:0000333,9.58e-15,10;CL:0000095,9.58e-15,10;CL:0000243,9.58e-15,10;CL:0000123,9.58e-15,10;CL:0000125,9.58e-15,10;CL:0000030,9.58e-15,10;CL:0000339,9.58e-15,10;CL:0000393,1.31e-14,39;CL:0000211,1.31e-14,39;CL:0000355,9.30e-13,9;CL:0002453,4.91e-12,8;CL:0000723,5.14e-10,91;CL:0000048,5.14e-10,91;CL:0000034,1.25e-09,97;CL:0000128,2.87e-09,6;CL:0000126,2.87e-09,6;CL:0000127,2.87e-09,6;CL:0000540,3.25e-09,33;CL:0000047,3.25e-09,33;CL:0000031,3.25e-09,33;CL:0000404,3.25e-09,33;CL:0000107,3.94e-09,9;CL:0000680,2.71e-08,6;CL:0000187,2.71e-08,6;CL:0000056,2.71e-08,6;CL:0000222,5.69e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.04e-08!23;UBERON:0001009!2.04e-08!23;UBERON:0004872!3.66e-08!33;UBERON:0007100!9.45e-08!18;UBERON:0000948!9.45e-08!18;UBERON:0005498!9.45e-08!18;UBERON:0004140!9.45e-08!18;UBERON:0009881!9.45e-08!18;UBERON:0004141!9.45e-08!18;UBERON:0003084!9.45e-08!18;UBERON:0007005!9.45e-08!18;UBERON:0004139!9.45e-08!18;UBERON:0004291!9.45e-08!18;UBERON:0000010!6.36e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.30e-13,9;UBERON:0002036,9.30e-13,9;UBERON:0002385,9.30e-13,9;UBERON:0000486,9.30e-13,9;UBERON:0007503,9.30e-13,9;UBERON:0001015,9.30e-13,9;UBERON:0002329,9.30e-13,9;UBERON:0003082,9.30e-13,9;UBERON:0003059,9.30e-13,9;UBERON:0007282,9.30e-13,9;UBERON:0004290,9.30e-13,9;UBERON:0009618,9.30e-13,9;UBERON:0000010,9.50e-12,11;UBERON:0000383,2.96e-11,10;UBERON:0004535,4.96e-10,23;UBERON:0001009,4.96e-10,23;UBERON:0007524,5.00e-10,11;UBERON:0003077,5.00e-10,11;UBERON:0007285,5.00e-10,11;UBERON:0002410,3.94e-09,9;UBERON:0001016,1.22e-08,75;UBERON:0007100,1.62e-08,18;UBERON:0000948,1.62e-08,18;UBERON:0005498,1.62e-08,18;UBERON:0004140,1.62e-08,18;UBERON:0009881,1.62e-08,18;UBERON:0004141,1.62e-08,18;UBERON:0003084,1.62e-08,18;UBERON:0007005,1.62e-08,18;UBERON:0004139,1.62e-08,18;UBERON:0004291,1.62e-08,18;UBERON:0001017,2.76e-07,73 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,1.39912375625629,0.157731082679119,0,0.42438965179803,0.340173160604279,1.19149141441062,1.30599894569468,0.319984845586813,0.22940928106717,0.57423196411502,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,10.4632907684227,8.5946887897618,5.23523743973798,8.82347232046521,6.83045484958446,13.5942898848723,2.14024590558481,1.11514624341466,2.56965453026354,6.25913075478431,2.39827672018491,6.15121311656521,4.27745777963423,1.81982348112971,1.43752564364972,0,0,0.336093799142464,1.54355661621568,3.15186783932632,2.06268836910977,0.404632921719196,1.05798195854407,0.633831403506179,4.06613438482959,0.889294796111139,0.449949858640699,0.988866362566974,0.7104801149461,3.89480143673926,3.45796474789399,0.207379224616955,0.405017814995072,0,1.99955689082663,2.65042249141936,0,0.191690942036473,0,2.20231761998777,0.766124028511126,0.768032666281217,0.791317726381163,1.28082701043374,0,1.11673199600552,2.25105044012672,1.83357897332172,1.47314292736834,1.56608848879013,0.931997229126503,2.72614295999463,3.70300644523249,0.579728977403356,0,0,0,0,0,0.140444420131752,0.681721290312231,1.03914401841148,0,0.281686839553361,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,0.148442139064825,0.520455980298408,0,0.691846491768175,0.301445281105245,0,0.251333182659351,0.988779870937496,0.144599356919912,1.76922110389975,0.970601099684455,0.441683036920787,0.484875253135222,0,0,0,0,0.599075622529601,1.19980546198682,0.508280908292259,0.449371918214468,0.457500602818626,0.376963056338593,0.869121600961382,1.02286182932132,0.62336413367868,0.486723789203273,0.611036183101898,0.622034853050465,0.252722758433675,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.612328492361951,1.40925092313335,0.281105173679186,0,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0,0.348252166522167,0.61734640922383,0,0.702213187313235,0.772043721344145,0,0.621377317606506,1.40715635988658,0.900310307305074,0.946978942340841,0.393528463494808,0.771335564436891,1.62773761325285,1.3413670069981,1.5179494507732,1.48103864922132,1.64167464079095,1.13496333364198,2.77779976108131,0.878200461164203,1.47627060636409,0.630869845692382,0.617427674275707,0,0,0,0,0.257734922644187,0.403367049246685,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0.442830443938806,0.156998727841375,0.246794327843601,0.296452627087149,0.667380422864376,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.575392274901621,0,0.549122826376163,0,0.744281895337007,0.624075346229121,0,0,0,1.10851914099963,0.189491411770485,0,0.169745085775188,0,1.00503754465089,0.476087281772027,1.17080188714679,0.315270288212382,0.664394068946325,0.956728611944923,0.983179888294428,0.690739927463582,0.867894351489069,0,0.54390568381871,0,0,0.642202359951168,0.586058432961016,0.983609672260053,0.252470927204373,1.26203287766503,0.780877488593277,1.29254038639679,2.15071918157297,1.33679204449436,3.67999490025482,2.02405350837447,2.33804686329049,3.16230222357219,0.642642632843614,0.99358059645788,0.534196811001766,0.81443479676788,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.922305443831782,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.469343416127421,0.847328283455281,0.220528398054962,0.49465875882444,0.645857706783622,0.301564624640779,0.477489376012546,0.164140899745061,0.291480836629851,0.18542530201051,0.683483523191411,0.82554747185289,0.740778109478847,0.188368457004691,0.546776910884101,0.228778173206523,1.69978429993855,0.69975726161829,0.690999869022119,0.954670618015114,0.158167996790568,0.609958401380546,0.108005340821801,0.627264888043406,0,0.674321731924103,0.661227645802687,0,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0.608175645870493,0.410843828659309,0.51968329191118,0.358053391334963,0.198681354781265,0,0.147689527174577,0.100966449948148,0.228620419965,0.201652370273681,0.38983152295901,0.192423683280659,0.116876902181569,0.680191150845634,0.221985953374065,0,0.335769232728157,0.965947970160952,0.375364950902364,0.549454872801795,0.428736758158132,1.00314420807073,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,0,0,0,0,0.906284817968409,0,0,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.735374033800057,1.33348036680969,0,0,0.505394423527595,0.50695859978048,0.188626341386076,0.561849044819294,0.448176066834085,0.631790158511746,0,0,0.38581844092741,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0.238436189947321,0.872078499793971,0.470546902076653,0.676916863133412,0.182927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.474540072496697,0.788035859004508,1.22769312950907,0.619747364743864,0,0.499621155875892,1.16965804222704,0.429742108096597,0.765153328275374,0.441182838239031,0.695603506861264 | |phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,1.39912375625629,0.157731082679119,0,0.42438965179803,0.340173160604279,1.19149141441062,1.30599894569468,0.319984845586813,0.22940928106717,0.57423196411502,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,10.4632907684227,8.5946887897618,5.23523743973798,8.82347232046521,6.83045484958446,13.5942898848723,2.14024590558481,1.11514624341466,2.56965453026354,6.25913075478431,2.39827672018491,6.15121311656521,4.27745777963423,1.81982348112971,1.43752564364972,0,0,0.336093799142464,1.54355661621568,3.15186783932632,2.06268836910977,0.404632921719196,1.05798195854407,0.633831403506179,4.06613438482959,0.889294796111139,0.449949858640699,0.988866362566974,0.7104801149461,3.89480143673926,3.45796474789399,0.207379224616955,0.405017814995072,0,1.99955689082663,2.65042249141936,0,0.191690942036473,0,2.20231761998777,0.766124028511126,0.768032666281217,0.791317726381163,1.28082701043374,0,1.11673199600552,2.25105044012672,1.83357897332172,1.47314292736834,1.56608848879013,0.931997229126503,2.72614295999463,3.70300644523249,0.579728977403356,0,0,0,0,0,0.140444420131752,0.681721290312231,1.03914401841148,0,0.281686839553361,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,0.148442139064825,0.520455980298408,0,0.691846491768175,0.301445281105245,0,0.251333182659351,0.988779870937496,0.144599356919912,1.76922110389975,0.970601099684455,0.441683036920787,0.484875253135222,0,0,0,0,0.599075622529601,1.19980546198682,0.508280908292259,0.449371918214468,0.457500602818626,0.376963056338593,0.869121600961382,1.02286182932132,0.62336413367868,0.486723789203273,0.611036183101898,0.622034853050465,0.252722758433675,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.612328492361951,1.40925092313335,0.281105173679186,0,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0,0.348252166522167,0.61734640922383,0,0.702213187313235,0.772043721344145,0,0.621377317606506,1.40715635988658,0.900310307305074,0.946978942340841,0.393528463494808,0.771335564436891,1.62773761325285,1.3413670069981,1.5179494507732,1.48103864922132,1.64167464079095,1.13496333364198,2.77779976108131,0.878200461164203,1.47627060636409,0.630869845692382,0.617427674275707,0,0,0,0,0.257734922644187,0.403367049246685,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0.442830443938806,0.156998727841375,0.246794327843601,0.296452627087149,0.667380422864376,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.575392274901621,0,0.549122826376163,0,0.744281895337007,0.624075346229121,0,0,0,1.10851914099963,0.189491411770485,0,0.169745085775188,0,1.00503754465089,0.476087281772027,1.17080188714679,0.315270288212382,0.664394068946325,0.956728611944923,0.983179888294428,0.690739927463582,0.867894351489069,0,0.54390568381871,0,0,0.642202359951168,0.586058432961016,0.983609672260053,0.252470927204373,1.26203287766503,0.780877488593277,1.29254038639679,2.15071918157297,1.33679204449436,3.67999490025482,2.02405350837447,2.33804686329049,3.16230222357219,0.642642632843614,0.99358059645788,0.534196811001766,0.81443479676788,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.922305443831782,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.469343416127421,0.847328283455281,0.220528398054962,0.49465875882444,0.645857706783622,0.301564624640779,0.477489376012546,0.164140899745061,0.291480836629851,0.18542530201051,0.683483523191411,0.82554747185289,0.740778109478847,0.188368457004691,0.546776910884101,0.228778173206523,1.69978429993855,0.69975726161829,0.690999869022119,0.954670618015114,0.158167996790568,0.609958401380546,0.108005340821801,0.627264888043406,0,0.674321731924103,0.661227645802687,0,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0.608175645870493,0.410843828659309,0.51968329191118,0.358053391334963,0.198681354781265,0,0.147689527174577,0.100966449948148,0.228620419965,0.201652370273681,0.38983152295901,0.192423683280659,0.116876902181569,0.680191150845634,0.221985953374065,0,0.335769232728157,0.965947970160952,0.375364950902364,0.549454872801795,0.428736758158132,1.00314420807073,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,0,0,0,0,0.906284817968409,0,0,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.735374033800057,1.33348036680969,0,0,0.505394423527595,0.50695859978048,0.188626341386076,0.561849044819294,0.448176066834085,0.631790158511746,0,0,0.38581844092741,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0.238436189947321,0.872078499793971,0.470546902076653,0.676916863133412,0.182927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.474540072496697,0.788035859004508,1.22769312950907,0.619747364743864,0,0.499621155875892,1.16965804222704,0.429742108096597,0.765153328275374,0.441182838239031,0.695603506861264 | ||
|short_description=p4@Flot1 | |||
}} | }} |
Latest revision as of 10:35, 26 September 2015
Short description: | p4@Flot1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Flot1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3097 |
Association with transcript: | 0bp_to_ENSMUST00000174227_5end |
EntrezGene: | Flot1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.22e-20 | 43 |
ectodermal cell | 4.04e-19 | 44 |
neurectodermal cell | 4.04e-19 | 44 |
embryonic cell | 2.19e-15 | 70 |
migratory neural crest cell | 9.58e-15 | 10 |
neuron associated cell | 9.58e-15 | 10 |
glial cell (sensu Vertebrata) | 9.58e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 9.58e-15 | 10 |
glial cell | 9.58e-15 | 10 |
glioblast | 9.58e-15 | 10 |
glioblast (sensu Vertebrata) | 9.58e-15 | 10 |
electrically responsive cell | 1.31e-14 | 39 |
electrically active cell | 1.31e-14 | 39 |
multi-potent skeletal muscle stem cell | 9.30e-13 | 9 |
oligodendrocyte precursor cell | 4.91e-12 | 8 |
somatic stem cell | 5.14e-10 | 91 |
multi fate stem cell | 5.14e-10 | 91 |
stem cell | 1.25e-09 | 97 |
oligodendrocyte | 2.87e-09 | 6 |
macroglial cell | 2.87e-09 | 6 |
astrocyte | 2.87e-09 | 6 |
neuron | 3.25e-09 | 33 |
neuronal stem cell | 3.25e-09 | 33 |
neuroblast | 3.25e-09 | 33 |
electrically signaling cell | 3.25e-09 | 33 |
autonomic neuron | 3.94e-09 | 9 |
muscle precursor cell | 2.71e-08 | 6 |
muscle cell | 2.71e-08 | 6 |
myoblast | 2.71e-08 | 6 |
mesodermal cell | 5.69e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 9.30e-13 | 9 |
striated muscle tissue | 9.30e-13 | 9 |
muscle tissue | 9.30e-13 | 9 |
multilaminar epithelium | 9.30e-13 | 9 |
epithelial vesicle | 9.30e-13 | 9 |
musculature | 9.30e-13 | 9 |
somite | 9.30e-13 | 9 |
myotome | 9.30e-13 | 9 |
presomitic mesoderm | 9.30e-13 | 9 |
presumptive segmental plate | 9.30e-13 | 9 |
dermomyotome | 9.30e-13 | 9 |
trunk paraxial mesoderm | 9.30e-13 | 9 |
peripheral nervous system | 9.50e-12 | 11 |
musculature of body | 2.96e-11 | 10 |
cardiovascular system | 4.96e-10 | 23 |
circulatory system | 4.96e-10 | 23 |
dense mesenchyme tissue | 5.00e-10 | 11 |
paraxial mesoderm | 5.00e-10 | 11 |
presumptive paraxial mesoderm | 5.00e-10 | 11 |
autonomic nervous system | 3.94e-09 | 9 |
nervous system | 1.22e-08 | 75 |
primary circulatory organ | 1.62e-08 | 18 |
heart | 1.62e-08 | 18 |
primitive heart tube | 1.62e-08 | 18 |
primary heart field | 1.62e-08 | 18 |
anterior lateral plate mesoderm | 1.62e-08 | 18 |
heart tube | 1.62e-08 | 18 |
heart primordium | 1.62e-08 | 18 |
cardiac mesoderm | 1.62e-08 | 18 |
cardiogenic plate | 1.62e-08 | 18 |
heart rudiment | 1.62e-08 | 18 |
central nervous system | 2.76e-07 | 73 |