FFCP PHASE1:Mm9::chr17:33855582..33855635,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:33855582..33855635,-
|short_description=p1@March2
|description=CAGE_peak_1_at_March2_5end
|association_with_transcript=0bp_to_ENSMUST00000066121,ENSMUST00...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=224703 | |EntrezGene=224703 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CA25,Q99M02,G3UYC2,G3UXS1,G3UXU1 | |UniProt=Q8CA25,Q99M02,G3UYC2,G3UXS1,G3UXU1 | ||
|association_with_transcript=0bp_to_ENSMUST00000066121,ENSMUST00000167611,ENSMUST00000172767,ENSMUST00000172934,ENSMUST00000173015,ENSMUST00000173329,NM_001252480,NM_145486,NR_045522,NR_045523,uc008bzi.1,uc008bzj.1,uc008bzk.1,uc012apj.1_5end | |||
|cluster_id=chr17:33855582..33855635,- | |||
|description=CAGE_peak_1_at_March2_5end | |||
|id=chr17:33855582..33855635,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.22e-10!114;UBERON:0004111!7.53e-10!122;UBERON:0009854!9.45e-09!23;UBERON:0009856!9.45e-09!23;UBERON:0002107!1.16e-08!22;UBERON:0007499!1.16e-08!22;UBERON:0006925!1.16e-08!22;UBERON:0009497!1.16e-08!22;UBERON:0000015!1.16e-08!22;UBERON:0002423!1.16e-08!22;UBERON:0006235!1.16e-08!22;UBERON:0008835!1.16e-08!22;UBERON:0003894!1.16e-08!22;UBERON:0004161!1.16e-08!22;UBERON:0008836!1.16e-08!22;UBERON:0003914!9.18e-08!47;UBERON:0002365!1.01e-07!25;UBERON:0002330!1.01e-07!25;UBERON:0005256!1.88e-07!47;UBERON:0000477!5.90e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.22e-10,114;UBERON:0004111,7.53e-10,122;UBERON:0009854,9.45e-09,23;UBERON:0009856,9.45e-09,23;UBERON:0002107,1.16e-08,22;UBERON:0007499,1.16e-08,22;UBERON:0006925,1.16e-08,22;UBERON:0009497,1.16e-08,22;UBERON:0000015,1.16e-08,22;UBERON:0002423,1.16e-08,22;UBERON:0006235,1.16e-08,22;UBERON:0008835,1.16e-08,22;UBERON:0003894,1.16e-08,22;UBERON:0004161,1.16e-08,22;UBERON:0008836,1.16e-08,22;UBERON:0005256,3.32e-08,45;UBERON:0003914,9.18e-08,47;UBERON:0002365,1.01e-07,25;UBERON:0002330,1.01e-07,25 | |||
|phase1_expression=29.7876855614917,26.1731555729521,28.6649520815408,57.4682001482977,55.5994260240445,16.1164101035414,18.221785966451,49.7124795250069,10.98152032783,16.1504523162175,16.4369249496485,15.6353431630859,51.5314197092929,47.2944377086776,145.90207567526,196.603484635521,304.309416985744,46.2152072249818,44.8364197890766,43.7121341351971,64.2927273542088,16.3830069481461,24.5527801790599,30.5585527535407,27.9879322901947,20.0981187440257,27.5687677541808,20.9007095705312,39.3348478274694,26.9672238843126,31.4857325130533,37.4668097341182,52.895571732273,31.6963362030877,18.7753552838328,18.9507495708681,15.7210404322024,128.489210636231,82.8215465195228,80.6226565719649,84.7053342764661,113.385550503102,107.783298372916,53.8838380935471,61.6371741814649,42.5828465015101,64.1560902365392,75.8727544203954,76.4507915915962,85.3547256936104,56.4145279150211,56.0635001023389,34.395434241836,42.7963663786693,39.6590682988108,45.5349201783626,54.7278870283025,48.4731766740796,32.5729501983952,37.0293685490423,48.8050180699758,45.0663227651946,59.5827513394463,101.688668052798,103.830968069532,121.492099655783,75.7988279611564,92.9808298878162,31.7290213663942,35.1015439662396,31.3384192413559,53.4167340835113,54.3336610740969,29.6427734100189,28.6577958344527,37.6879702510109,94.6996576594743,85.8058911932461,80.1826103597591,33.7628896589296,30.8313358940121,29.1711487511786,102.460160633507,84.414391504752,70.8983869684399,39.7748590389451,37.301380369365,40.4486797440902,29.1545844332759,40.9597855778778,60.5816781386507,113.575951761543,55.7576493640355,92.8289489617046,76.6736172588249,59.5875759839456,89.7439844641894,34.7677858059238,31.9536785661529,54.4142944745924,33.3798904870733,29.5150898052931,33.1246811618639,56.8853362522665,24.246996593256,24.5759069510846,24.7706978057244,51.2685619938579,23.8222852955398,56.8533392618279,30.8803881643722,49.0189420082547,47.506792434748,48.5326902579445,34.8062573121686,74.5202886584976,75.1472701912497,85.8920180104275,167.191394318526,54.8389621321717,103.353830639464,92.6111733488274,55.9175283654366,63.8262137485173,81.474768950434,40.8731288333746,13.539109069169,17.3971791988088,11.3092502095028,77.8911324905078,82.8076091101714,35.5601816479406,57.7096743038358,64.9517261619039,81.4529134673476,71.5483970128811,33.9125081621553,89.4486118686569,26.7886123939695,53.2417895392779,13.6626465110839,17.7024620413774,21.2473313170312,23.6606564002073,30.7524976164002,33.6939084349155,35.7940587818164,34.6662516790281,11.2095356325078,17.3977593754394,16.8913079197391,23.4539433697505,19.7413546950174,26.1189124891625,27.3690241422565,21.0976322827603,17.5553296828309,12.610047448621,15.344828967362,31.4831174253963,27.2050229578072,28.8099298337624,29.3563472125661,41.1237244352074,37.4869084316329,39.7633045523197,43.4602910267383,51.2599852991874,46.4058776756015,75.3528660123047,107.902585505534,145.03038752593,137.87747240278,138.635230579464,57.829735855135,37.1485650689217,41.6327666559585,29.3540128996534,18.7693660471006,19.7401171081373,20.2321914275687,20.9750865608276,22.237804384487,32.1481308130225,32.2679761850268,34.2573825825943,39.7109629904426,45.5610320974235,34.7036075072034,35.0539569375146,40.6339533764425,46.3999166682676,17.8287826895897,21.0217263201901,21.4144697778853,20.5687841123767,22.6924409986122,31.0701682114111,39.2066530170395,47.2352473534727,47.4136158080952,64.6601138950235,74.1131567717872,81.58725669517,99.0657335370543,134.017818981373,146.059287399722,167.859303187682,169.071565582863,113.927670430521,79.6083963465424,71.9350902552773,46.0058260887535,69.9624981616786,56.4788188337355,59.8611940734655,57.9453645675776,63.6825448199645,72.0537441649758,21.9810037653762,17.6002174557388,19.0114496068211,20.6527418493882,30.9886576267359,50.9413391496069,73.5653852423902,72.9850717211664,73.5262769633933,73.668103119759,99.7927586618844,110.863758357905,108.052846760389,40.7136466636035,44.6002660731342,41.7999632066181,35.5958402733105,101.949624642248,86.3850130184537,28.6886154409182,124.468167111756,28.7112479668794,34.3586094981042,37.483671205507,34.1725381072149,32.7514050901119,30.8553418559827,33.1944775373413,36.2397263810027,31.6230222357219,42.4144137676785,39.6012837731069,36.3253831481201,35.0206962610189,45.8616941863649,19.9117707509944,24.0352829793432,23.2789138862858,21.3123740124165,31.0066987524811,27.3617281670095,42.12381178642,22.9026249570828,24.9548164869305,36.3442271626188,30.5713964867496,28.8779521094923,29.9586853063333,19.9867814374754,27.8121170132922,31.5075441496441,24.650292476276,27.6471667283209,32.58070607922,34.7090041990643,41.302220619213,80.072522786524,47.4136055818168,32.647478082413,44.8871106214617,32.9911699357013,37.9604053929974,35.9468570441684,34.1032578856925,95.308605233402,136.525833757484,34.8793806857846,66.2996407983568,196.656669112897,154.464477324758,244.10631081136,13.5982743995084,15.6745626602497,21.2827959658813,54.4162252268615,14.5514557047322,26.4315307264903,23.7611749807963,21.7451827855047,33.191109689419,38.7060674124435,44.1369453573294,58.8950869464067,47.6983101713798,43.4937519160848,149.942321689995,22.5769984526408,29.1206943204492,36.1679210319929,28.1568415181454,31.256883215794,28.9872379455012,40.7539724561564,40.7902849816015,50.0079130109833,77.192041677108,52.1418349036494,22.9079493277886,21.3638790902841,17.0196278100911,25.2427640891149,31.9876981197836,36.2990257550306,38.5469665925647,35.0353581320072,38.9416782007049,38.9189074628204,39.2755259381202,39.7354905974561,57.3865589711504,59.1766301235702,16.4269605496808,12.6496537819361,19.1388462655049,63.945755624655,55.1786477826475,33.150443992375,29.5828363129111,41.1289125308998,71.7234840123675,75.0330135506698,63.591401991773,66.1634752023197,72.6187470956881,65.7192690729039,61.4270475210943,49.08501115144,75.221639891378,69.3798817747439,14.3226539666164,20.7492934168536,38.7565285061885,52.2679441696832,46.3245089407841,53.4984609589541,46.227319382736,54.8053252255459,60.3328114032613,46.2435897527749,47.9075876792553,43.7613112015697,39.7976406747,45.073707293028,47.8437456400259,51.916012349855,53.0750212827438,56.7153108163293,52.7469953028232,57.9963745329525,37.7156177623957,49.3382741122958,48.6409827492535,48.6910495718301,51.6660498480165,53.8995052269979,56.3418156448139,47.0894783473739,45.9017904799013,62.8479344256667,50.419882702774,51.9118622119219,53.6092666552293,50.3544733854389,44.7543337476248,39.7198818921334,48.4238429481995,54.7921187823161,51.6478496585877,72.3539854712011,85.7910991795559 | |phase1_expression=29.7876855614917,26.1731555729521,28.6649520815408,57.4682001482977,55.5994260240445,16.1164101035414,18.221785966451,49.7124795250069,10.98152032783,16.1504523162175,16.4369249496485,15.6353431630859,51.5314197092929,47.2944377086776,145.90207567526,196.603484635521,304.309416985744,46.2152072249818,44.8364197890766,43.7121341351971,64.2927273542088,16.3830069481461,24.5527801790599,30.5585527535407,27.9879322901947,20.0981187440257,27.5687677541808,20.9007095705312,39.3348478274694,26.9672238843126,31.4857325130533,37.4668097341182,52.895571732273,31.6963362030877,18.7753552838328,18.9507495708681,15.7210404322024,128.489210636231,82.8215465195228,80.6226565719649,84.7053342764661,113.385550503102,107.783298372916,53.8838380935471,61.6371741814649,42.5828465015101,64.1560902365392,75.8727544203954,76.4507915915962,85.3547256936104,56.4145279150211,56.0635001023389,34.395434241836,42.7963663786693,39.6590682988108,45.5349201783626,54.7278870283025,48.4731766740796,32.5729501983952,37.0293685490423,48.8050180699758,45.0663227651946,59.5827513394463,101.688668052798,103.830968069532,121.492099655783,75.7988279611564,92.9808298878162,31.7290213663942,35.1015439662396,31.3384192413559,53.4167340835113,54.3336610740969,29.6427734100189,28.6577958344527,37.6879702510109,94.6996576594743,85.8058911932461,80.1826103597591,33.7628896589296,30.8313358940121,29.1711487511786,102.460160633507,84.414391504752,70.8983869684399,39.7748590389451,37.301380369365,40.4486797440902,29.1545844332759,40.9597855778778,60.5816781386507,113.575951761543,55.7576493640355,92.8289489617046,76.6736172588249,59.5875759839456,89.7439844641894,34.7677858059238,31.9536785661529,54.4142944745924,33.3798904870733,29.5150898052931,33.1246811618639,56.8853362522665,24.246996593256,24.5759069510846,24.7706978057244,51.2685619938579,23.8222852955398,56.8533392618279,30.8803881643722,49.0189420082547,47.506792434748,48.5326902579445,34.8062573121686,74.5202886584976,75.1472701912497,85.8920180104275,167.191394318526,54.8389621321717,103.353830639464,92.6111733488274,55.9175283654366,63.8262137485173,81.474768950434,40.8731288333746,13.539109069169,17.3971791988088,11.3092502095028,77.8911324905078,82.8076091101714,35.5601816479406,57.7096743038358,64.9517261619039,81.4529134673476,71.5483970128811,33.9125081621553,89.4486118686569,26.7886123939695,53.2417895392779,13.6626465110839,17.7024620413774,21.2473313170312,23.6606564002073,30.7524976164002,33.6939084349155,35.7940587818164,34.6662516790281,11.2095356325078,17.3977593754394,16.8913079197391,23.4539433697505,19.7413546950174,26.1189124891625,27.3690241422565,21.0976322827603,17.5553296828309,12.610047448621,15.344828967362,31.4831174253963,27.2050229578072,28.8099298337624,29.3563472125661,41.1237244352074,37.4869084316329,39.7633045523197,43.4602910267383,51.2599852991874,46.4058776756015,75.3528660123047,107.902585505534,145.03038752593,137.87747240278,138.635230579464,57.829735855135,37.1485650689217,41.6327666559585,29.3540128996534,18.7693660471006,19.7401171081373,20.2321914275687,20.9750865608276,22.237804384487,32.1481308130225,32.2679761850268,34.2573825825943,39.7109629904426,45.5610320974235,34.7036075072034,35.0539569375146,40.6339533764425,46.3999166682676,17.8287826895897,21.0217263201901,21.4144697778853,20.5687841123767,22.6924409986122,31.0701682114111,39.2066530170395,47.2352473534727,47.4136158080952,64.6601138950235,74.1131567717872,81.58725669517,99.0657335370543,134.017818981373,146.059287399722,167.859303187682,169.071565582863,113.927670430521,79.6083963465424,71.9350902552773,46.0058260887535,69.9624981616786,56.4788188337355,59.8611940734655,57.9453645675776,63.6825448199645,72.0537441649758,21.9810037653762,17.6002174557388,19.0114496068211,20.6527418493882,30.9886576267359,50.9413391496069,73.5653852423902,72.9850717211664,73.5262769633933,73.668103119759,99.7927586618844,110.863758357905,108.052846760389,40.7136466636035,44.6002660731342,41.7999632066181,35.5958402733105,101.949624642248,86.3850130184537,28.6886154409182,124.468167111756,28.7112479668794,34.3586094981042,37.483671205507,34.1725381072149,32.7514050901119,30.8553418559827,33.1944775373413,36.2397263810027,31.6230222357219,42.4144137676785,39.6012837731069,36.3253831481201,35.0206962610189,45.8616941863649,19.9117707509944,24.0352829793432,23.2789138862858,21.3123740124165,31.0066987524811,27.3617281670095,42.12381178642,22.9026249570828,24.9548164869305,36.3442271626188,30.5713964867496,28.8779521094923,29.9586853063333,19.9867814374754,27.8121170132922,31.5075441496441,24.650292476276,27.6471667283209,32.58070607922,34.7090041990643,41.302220619213,80.072522786524,47.4136055818168,32.647478082413,44.8871106214617,32.9911699357013,37.9604053929974,35.9468570441684,34.1032578856925,95.308605233402,136.525833757484,34.8793806857846,66.2996407983568,196.656669112897,154.464477324758,244.10631081136,13.5982743995084,15.6745626602497,21.2827959658813,54.4162252268615,14.5514557047322,26.4315307264903,23.7611749807963,21.7451827855047,33.191109689419,38.7060674124435,44.1369453573294,58.8950869464067,47.6983101713798,43.4937519160848,149.942321689995,22.5769984526408,29.1206943204492,36.1679210319929,28.1568415181454,31.256883215794,28.9872379455012,40.7539724561564,40.7902849816015,50.0079130109833,77.192041677108,52.1418349036494,22.9079493277886,21.3638790902841,17.0196278100911,25.2427640891149,31.9876981197836,36.2990257550306,38.5469665925647,35.0353581320072,38.9416782007049,38.9189074628204,39.2755259381202,39.7354905974561,57.3865589711504,59.1766301235702,16.4269605496808,12.6496537819361,19.1388462655049,63.945755624655,55.1786477826475,33.150443992375,29.5828363129111,41.1289125308998,71.7234840123675,75.0330135506698,63.591401991773,66.1634752023197,72.6187470956881,65.7192690729039,61.4270475210943,49.08501115144,75.221639891378,69.3798817747439,14.3226539666164,20.7492934168536,38.7565285061885,52.2679441696832,46.3245089407841,53.4984609589541,46.227319382736,54.8053252255459,60.3328114032613,46.2435897527749,47.9075876792553,43.7613112015697,39.7976406747,45.073707293028,47.8437456400259,51.916012349855,53.0750212827438,56.7153108163293,52.7469953028232,57.9963745329525,37.7156177623957,49.3382741122958,48.6409827492535,48.6910495718301,51.6660498480165,53.8995052269979,56.3418156448139,47.0894783473739,45.9017904799013,62.8479344256667,50.419882702774,51.9118622119219,53.6092666552293,50.3544733854389,44.7543337476248,39.7198818921334,48.4238429481995,54.7921187823161,51.6478496585877,72.3539854712011,85.7910991795559 | ||
|short_description=p1@March2 | |||
}} | }} |
Latest revision as of 06:53, 26 September 2015
Short description: | p1@March2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_March2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000066121, ENSMUST00000167611, ENSMUST00000172767, ENSMUST00000172934, ENSMUST00000173015, ENSMUST00000173329, NM_001252480, NM_145486, NR_045522, NR_045523, uc008bzi.1, uc008bzj.1, uc008bzk.1, uc012apj.1_5end |
EntrezGene: | March2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 3.22e-10 | 114 |
anatomical conduit | 7.53e-10 | 122 |
digestive tract diverticulum | 9.45e-09 | 23 |
sac | 9.45e-09 | 23 |
liver | 1.16e-08 | 22 |
epithelial sac | 1.16e-08 | 22 |
digestive gland | 1.16e-08 | 22 |
epithelium of foregut-midgut junction | 1.16e-08 | 22 |
anatomical boundary | 1.16e-08 | 22 |
hepatobiliary system | 1.16e-08 | 22 |
foregut-midgut junction | 1.16e-08 | 22 |
hepatic diverticulum | 1.16e-08 | 22 |
liver primordium | 1.16e-08 | 22 |
septum transversum | 1.16e-08 | 22 |
liver bud | 1.16e-08 | 22 |
trunk mesenchyme | 3.32e-08 | 45 |
epithelial tube | 9.18e-08 | 47 |
exocrine gland | 1.01e-07 | 25 |
exocrine system | 1.01e-07 | 25 |