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FFCP PHASE1:Mm9::chr17:27650332..27650350,-: Difference between revisions

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(Created page with "{{FFCP |id=chr17:27650332..27650350,- |short_description=p1@Grm4 |description=CAGE_peak_1_at_Grm4_5end |association_with_transcript=-46bp_to_ENSMUST00000088073,ENSMUST0000...")
 
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{{FFCP
{{FFCP
|id=chr17:27650332..27650350,-
|DHSsupport=NA
|short_description=p1@Grm4
|DPIdataset=NA
|description=CAGE_peak_1_at_Grm4_5end
|association_with_transcript=-46bp_to_ENSMUST00000088073,ENSMUST00000118161,ENSMUST00000169185_5end
|EntrezGene=268934
|EntrezGene=268934
|HGNC=
|HGNC=
|MCL_coexpression_id=42
|TSSclassifier=NA
|UniProt=Q68EF4,G3XA00
|UniProt=Q68EF4,G3XA00
|association_with_transcript=-46bp_to_ENSMUST00000088073,ENSMUST00000118161,ENSMUST00000169185_5end
|cluster_id=chr17:27650332..27650350,-
|description=CAGE_peak_1_at_Grm4_5end
|id=chr17:27650332..27650350,-
|ontology_enrichment_celltype=CL:0000117!6.82e-13!23;CL:0000337!6.82e-13!23;CL:0000540!2.67e-07!33;CL:0000047!2.67e-07!33;CL:0000031!2.67e-07!33;CL:0000404!2.67e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,8.70e-21,23;CL:0000337,8.70e-21,23;CL:0000540,5.29e-14,33;CL:0000047,5.29e-14,33;CL:0000031,5.29e-14,33;CL:0000404,5.29e-14,33;CL:0002319,3.33e-11,43;CL:0000393,7.49e-11,39;CL:0000211,7.49e-11,39;CL:0000221,8.55e-11,44;CL:0000133,8.55e-11,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.46e-21!63;UBERON:0001049!3.71e-20!52;UBERON:0005068!3.71e-20!52;UBERON:0006241!3.71e-20!52;UBERON:0007135!3.71e-20!52;UBERON:0001017!3.40e-19!73;UBERON:0005743!3.40e-19!73;UBERON:0000955!5.87e-19!50;UBERON:0006238!5.87e-19!50;UBERON:0000073!1.91e-18!75;UBERON:0001016!1.91e-18!75;UBERON:0002616!3.45e-18!49;UBERON:0004121!4.56e-18!102;UBERON:0000924!4.56e-18!102;UBERON:0006601!4.56e-18!102;UBERON:0002346!1.74e-17!71;UBERON:0003075!1.74e-17!71;UBERON:0007284!1.74e-17!71;UBERON:0007811!7.84e-17!86;UBERON:0000153!5.44e-16!94;UBERON:0003056!3.77e-15!49;UBERON:0002020!5.76e-14!34;UBERON:0003080!1.27e-13!40;UBERON:0002780!5.32e-13!39;UBERON:0001890!5.32e-13!39;UBERON:0006240!5.32e-13!39;UBERON:0002791!1.26e-10!29;UBERON:0003528!1.26e-10!29;UBERON:0001893!1.26e-10!29;UBERON:0000064!3.17e-08!99;UBERON:0003076!1.72e-07!12;UBERON:0003057!1.72e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.33e-27,54;UBERON:0001017,3.50e-27,73;UBERON:0001016,4.34e-26,75;UBERON:0001049,1.61e-24,52;UBERON:0005068,1.61e-24,52;UBERON:0006241,1.61e-24,52;UBERON:0007135,1.61e-24,52;UBERON:0004121,4.41e-21,95;UBERON:0000924,4.41e-21,95;UBERON:0006601,4.41e-21,95;UBERON:0002346,2.24e-20,64;UBERON:0003075,2.24e-20,64;UBERON:0007284,2.24e-20,64;UBERON:0002020,9.05e-20,34;UBERON:0000955,5.30e-19,47;UBERON:0006238,5.30e-19,47;UBERON:0002616,7.73e-18,46;UBERON:0010371,1.16e-17,73;UBERON:0003528,4.61e-14,29;UBERON:0002791,4.61e-14,29;UBERON:0001893,4.61e-14,29;UBERON:0003080,1.50e-13,40;UBERON:0010314,2.26e-13,92;UBERON:0003076,3.85e-13,12;UBERON:0003057,3.85e-13,12;UBERON:0002780,1.28e-12,39;UBERON:0001890,1.28e-12,39;UBERON:0006240,1.28e-12,39;UBERON:0003056,7.94e-12,49;UBERON:0002420,3.90e-10,8;UBERON:0007245,3.90e-10,8;UBERON:0010009,3.90e-10,8;UBERON:0010011,3.90e-10,8;UBERON:0000454,3.90e-10,8;UBERON:0002240,5.99e-09,6;UBERON:0005174,5.99e-09,6;UBERON:0001137,5.99e-09,6;UBERON:0002021,2.70e-08,10;UBERON:0000411,2.70e-08,10;UBERON:0001950,2.70e-08,10;UBERON:0001948,7.72e-08,5;UBERON:0002315,7.72e-08,5;UBERON:0002619,1.21e-07,17;UBERON:0011216,4.51e-07,194;UBERON:0000956,8.02e-07,21;UBERON:0001869,8.02e-07,21;UBERON:0000203,8.02e-07,21
|phase1_expression=2.88267924788629,0.348975407639361,0,0,0.500895729946347,5.70789524500425,9.1108929832255,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,8.1641558545027,0.0992909512008853,0,0.799962113967033,1.60586496747019,1.72269589234506,3.01533397311352,1.939241094173,1.14014051673824,0.504060259519861,3.99114919179548,0,0,0,0,1.99481574430191,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,0,0,0,0,0,0,0,0,0,7.08107613008592,7.40587370980846,10.1413024560989,0,0,0.449949858640699,0.988866362566974,0,1.19840044207362,0.768436610643109,0,0.270011876663381,0.420649922702764,15.7108041422092,9.49734726091938,2.32732518508413,1.0543001812006,6.43453150627015,25.3266526298594,19.6638500651189,11.8277030607307,4.08847491963601,1.9212405156506,1.56274011167028,28.4766658981409,17.4456409109821,7.94550888439413,12.9636577608414,7.97281412474976,5.96478226640962,0,0.151143120213571,0,0,0,0,0,0,2.10666630197628,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0,1.21439728736295,0,0.922461989024234,0.150722640552623,0,0,0.247194967734374,0,0,0.647067399789637,0,0,0,122.675153947838,403.184910615901,0,0,0,0,7.04016005202667,10.0650132620098,1.7591609295801,2.78118912307642,1.02286182932132,7.89594569326328,11.1946471516753,0.101839363850316,0.248813941220186,0,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.90422890701429,0.612328492361951,0.640568601424249,1.49922759295566,3.10444044886819,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0.348252166522167,1.02891068203972,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.456994050438915,0,0.203651327845314,0.581857461502877,0.420814919341911,0.126473074248515,0,0,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,4.33486592967038,4.57125577709592,0,0,0,0,0,0,0,0,0,0.292255857911312,0,26.0270266301664,1.13552068166615,0,0.162886959353576,2.63952196756057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.905510786479282,1.07168517515796,0.709360934569094,0.535106452806212,0.493647061806363,0.913394847343798,2.81606049676452,0.42366414172764,0,0.16488625294148,0.161464426695906,0.361877549568935,0.119372344003136,0.328281799490123,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0.2604087696879,0.838874755405687,0.241584120826006,0,0,1.82452693761148,1.64337531463724,1.68897069871134,1.79026695667481,0.198681354781265,0.600977247599844,0.147689527174577,0.302899349844443,0.304827226619999,0.504130925684203,0.0974578807397524,0.288635524920988,0.116876902181569,2.26730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.643105137237198,0,2.82375921308533,2.30162618253588,0.572895513439397,3.78077001156113,3.42541259885321,1.5107877947794,1.35004500046361,3.15224842256954,2.26571204492102,1.55328093525546,0.31136204275253,1.59609949360412,0.512200817262403,0,0.209613162627982,0.183843508450014,1.33348036680969,0.824140228955577,0,0.505394423527595,0,0.565879024158229,0.655490552289177,0.640251524048693,0.402048282689293,1.42888107384922,0.347652977834566,0.578727661391115,0,0.147198920134397,0,1.06485483695602,0.238436189947321,0.872078499793971,0.564656282491984,0.592302255241736,0.73171189149109,0.526139422875686,0.135804113845862,0.561142271657738,0.949080144993393,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,1.74867404556562,0.233931608445408,0.859484216193193,0.57386499620653,0.220591419119515,0
|phase1_expression=2.88267924788629,0.348975407639361,0,0,0.500895729946347,5.70789524500425,9.1108929832255,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,8.1641558545027,0.0992909512008853,0,0.799962113967033,1.60586496747019,1.72269589234506,3.01533397311352,1.939241094173,1.14014051673824,0.504060259519861,3.99114919179548,0,0,0,0,1.99481574430191,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,0,0,0,0,0,0,0,0,0,7.08107613008592,7.40587370980846,10.1413024560989,0,0,0.449949858640699,0.988866362566974,0,1.19840044207362,0.768436610643109,0,0.270011876663381,0.420649922702764,15.7108041422092,9.49734726091938,2.32732518508413,1.0543001812006,6.43453150627015,25.3266526298594,19.6638500651189,11.8277030607307,4.08847491963601,1.9212405156506,1.56274011167028,28.4766658981409,17.4456409109821,7.94550888439413,12.9636577608414,7.97281412474976,5.96478226640962,0,0.151143120213571,0,0,0,0,0,0,2.10666630197628,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0,1.21439728736295,0,0.922461989024234,0.150722640552623,0,0,0.247194967734374,0,0,0.647067399789637,0,0,0,122.675153947838,403.184910615901,0,0,0,0,7.04016005202667,10.0650132620098,1.7591609295801,2.78118912307642,1.02286182932132,7.89594569326328,11.1946471516753,0.101839363850316,0.248813941220186,0,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.90422890701429,0.612328492361951,0.640568601424249,1.49922759295566,3.10444044886819,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0.348252166522167,1.02891068203972,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.456994050438915,0,0.203651327845314,0.581857461502877,0.420814919341911,0.126473074248515,0,0,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,4.33486592967038,4.57125577709592,0,0,0,0,0,0,0,0,0,0.292255857911312,0,26.0270266301664,1.13552068166615,0,0.162886959353576,2.63952196756057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.905510786479282,1.07168517515796,0.709360934569094,0.535106452806212,0.493647061806363,0.913394847343798,2.81606049676452,0.42366414172764,0,0.16488625294148,0.161464426695906,0.361877549568935,0.119372344003136,0.328281799490123,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0.2604087696879,0.838874755405687,0.241584120826006,0,0,1.82452693761148,1.64337531463724,1.68897069871134,1.79026695667481,0.198681354781265,0.600977247599844,0.147689527174577,0.302899349844443,0.304827226619999,0.504130925684203,0.0974578807397524,0.288635524920988,0.116876902181569,2.26730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.643105137237198,0,2.82375921308533,2.30162618253588,0.572895513439397,3.78077001156113,3.42541259885321,1.5107877947794,1.35004500046361,3.15224842256954,2.26571204492102,1.55328093525546,0.31136204275253,1.59609949360412,0.512200817262403,0,0.209613162627982,0.183843508450014,1.33348036680969,0.824140228955577,0,0.505394423527595,0,0.565879024158229,0.655490552289177,0.640251524048693,0.402048282689293,1.42888107384922,0.347652977834566,0.578727661391115,0,0.147198920134397,0,1.06485483695602,0.238436189947321,0.872078499793971,0.564656282491984,0.592302255241736,0.73171189149109,0.526139422875686,0.135804113845862,0.561142271657738,0.949080144993393,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,1.74867404556562,0.233931608445408,0.859484216193193,0.57386499620653,0.220591419119515,0
|short_description=p1@Grm4
}}
}}

Latest revision as of 03:36, 26 September 2015

Short description:p1@Grm4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grm4_5end
Coexpression cluster:MCL_coexpression_mm9:42
Association with transcript: -46bp_to_ENSMUST00000088073, ENSMUST00000118161, ENSMUST00000169185_5end
EntrezGene:Grm4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grm4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.11
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.48
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2122.68
cerebellum, neonate N30.CNhs11135.1395-42I2403.18
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B211.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I926.03
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.70e-2123
neuroblast (sensu Vertebrata)8.70e-2123
neuron5.29e-1433
neuronal stem cell5.29e-1433
neuroblast5.29e-1433
electrically signaling cell5.29e-1433
neural cell3.33e-1143
electrically responsive cell7.49e-1139
electrically active cell7.49e-1139
ectodermal cell8.55e-1144
neurectodermal cell8.55e-1144

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.33e-2754
central nervous system3.50e-2773
nervous system4.34e-2675
neural tube1.61e-2452
neural rod1.61e-2452
future spinal cord1.61e-2452
neural keel1.61e-2452
ectoderm-derived structure4.41e-2195
ectoderm4.41e-2195
presumptive ectoderm4.41e-2195
neurectoderm2.24e-2064
neural plate2.24e-2064
presumptive neural plate2.24e-2064
gray matter9.05e-2034
brain5.30e-1947
future brain5.30e-1947
regional part of brain7.73e-1846
ecto-epithelium1.16e-1773
brain grey matter4.61e-1429
regional part of telencephalon4.61e-1429
telencephalon4.61e-1429
anterior neural tube1.50e-1340
structure with developmental contribution from neural crest2.26e-1392
posterior neural tube3.85e-1312
chordal neural plate3.85e-1312
regional part of forebrain1.28e-1239
forebrain1.28e-1239
future forebrain1.28e-1239
pre-chordal neural plate7.94e-1249
basal ganglion3.90e-108
nuclear complex of neuraxis3.90e-108
aggregate regional part of brain3.90e-108
collection of basal ganglia3.90e-108
cerebral subcortex3.90e-108
spinal cord5.99e-096
dorsal region element5.99e-096
dorsum5.99e-096
occipital lobe2.70e-0810
visual cortex2.70e-0810
neocortex2.70e-0810
regional part of spinal cord7.72e-085
gray matter of spinal cord7.72e-085
regional part of cerebral cortex1.21e-0717
organ system subdivision4.51e-07194
cerebral cortex8.02e-0721
cerebral hemisphere8.02e-0721
pallium8.02e-0721
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