FFCP PHASE1:Mm9::chr17:27563446..27563457,-: Difference between revisions
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|id=chr17:27563446..27563457,-
|short_description=p@chr17:27563446..27563457,-
|description=CAGE_peak_at_chr17:27563446..27563457,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:27563446..27563457,- | |||
|description=CAGE_peak_at_chr17:27563446..27563457,- | |||
|id=chr17:27563446..27563457,- | |||
|ontology_enrichment_celltype=CL:0000117!3.76e-11!23;CL:0000337!3.76e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.68e-10,3;CL:0002610,1.03e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.57e-19!52;UBERON:0005068!5.57e-19!52;UBERON:0006241!5.57e-19!52;UBERON:0007135!5.57e-19!52;UBERON:0001017!2.59e-16!73;UBERON:0005743!2.59e-16!73;UBERON:0002346!3.22e-16!71;UBERON:0003075!3.22e-16!71;UBERON:0007284!3.22e-16!71;UBERON:0000073!1.23e-15!75;UBERON:0001016!1.23e-15!75;UBERON:0000955!3.43e-15!50;UBERON:0006238!3.43e-15!50;UBERON:0000033!4.32e-15!63;UBERON:0002616!4.84e-14!49;UBERON:0004121!1.60e-13!102;UBERON:0000924!1.60e-13!102;UBERON:0006601!1.60e-13!102;UBERON:0003076!2.18e-13!12;UBERON:0003057!2.18e-13!12;UBERON:0002020!3.21e-13!34;UBERON:0007811!1.68e-11!86;UBERON:0000153!9.66e-11!94;UBERON:0002240!1.43e-10!6;UBERON:0005174!1.43e-10!6;UBERON:0001137!1.43e-10!6;UBERON:0003056!1.97e-09!49;UBERON:0003080!4.20e-09!40;UBERON:0001948!6.99e-09!5;UBERON:0002315!6.99e-09!5;UBERON:0002780!3.67e-08!39;UBERON:0001890!3.67e-08!39;UBERON:0006240!3.67e-08!39;UBERON:0002791!5.85e-08!29;UBERON:0003528!5.85e-08!29;UBERON:0001893!5.85e-08!29;UBERON:0002420!4.92e-07!8;UBERON:0007245!4.92e-07!8;UBERON:0010009!4.92e-07!8;UBERON:0010011!4.92e-07!8;UBERON:0000454!4.92e-07!8;UBERON:0002298!6.78e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,9.62e-15,12;UBERON:0003057,9.62e-15,12;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0000073,3.81e-14,54;UBERON:0001049,3.28e-12,52;UBERON:0005068,3.28e-12,52;UBERON:0006241,3.28e-12,52;UBERON:0007135,3.28e-12,52;UBERON:0002240,4.04e-11,6;UBERON:0005174,4.04e-11,6;UBERON:0001137,4.04e-11,6;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0002257,2.68e-10,3;UBERON:0002346,9.98e-10,64;UBERON:0003075,9.98e-10,64;UBERON:0007284,9.98e-10,64;UBERON:0004684,1.03e-09,3;UBERON:0002275,1.03e-09,3;UBERON:0000955,1.46e-08,47;UBERON:0006238,1.46e-08,47;UBERON:0010371,2.14e-08,73;UBERON:0002037,4.12e-08,4;UBERON:0002680,4.12e-08,4;UBERON:0001895,4.12e-08,4;UBERON:0010092,4.12e-08,4;UBERON:0006215,4.12e-08,4;UBERON:0002259,7.68e-08,1;UBERON:0002314,7.68e-08,1;UBERON:0004061,7.68e-08,1;UBERON:0006777,7.68e-08,1;UBERON:0005882,7.68e-08,1;UBERON:0002616,9.96e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,1.0214987046815,1.38245879930619,0.395658863190582,0.274462930807229,0,0.558365998002762,0,0.30559649555362,2.35702868378934,2.13557521198654,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,11.4184510834503,10.4723353406728,0,0,0,0,1.19832511523858,0.457500602818626,0.502617408451458,0.173824320192276,0.255715457330331,1.66230435647648,1.1356888414743,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.776110112217047,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0.25984164595559,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,0,0,1.20297227640581,0,0,0,0.900642406448441,1.35942722695261,0,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,1.0214987046815,1.38245879930619,0.395658863190582,0.274462930807229,0,0.558365998002762,0,0.30559649555362,2.35702868378934,2.13557521198654,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,11.4184510834503,10.4723353406728,0,0,0,0,1.19832511523858,0.457500602818626,0.502617408451458,0.173824320192276,0.255715457330331,1.66230435647648,1.1356888414743,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.776110112217047,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0.25984164595559,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,0,0,1.20297227640581,0,0,0,0.900642406448441,1.35942722695261,0,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr17:27563446..27563457,- | |||
}} | }} |
Latest revision as of 12:18, 4 August 2015
Short description: | p@chr17:27563446..27563457, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:27563446..27563457, - |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.68e-10 | 3 |
raphe nuclei neuron | 1.03e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 9.62e-15 | 12 |
chordal neural plate | 9.62e-15 | 12 |
central nervous system | 1.30e-14 | 73 |
nervous system | 3.42e-14 | 75 |
regional part of nervous system | 3.81e-14 | 54 |
neural tube | 3.28e-12 | 52 |
neural rod | 3.28e-12 | 52 |
future spinal cord | 3.28e-12 | 52 |
neural keel | 3.28e-12 | 52 |
spinal cord | 4.04e-11 | 6 |
dorsal region element | 4.04e-11 | 6 |
dorsum | 4.04e-11 | 6 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
ventral horn of spinal cord | 2.68e-10 | 3 |
neurectoderm | 9.98e-10 | 64 |
neural plate | 9.98e-10 | 64 |
presumptive neural plate | 9.98e-10 | 64 |
raphe nuclei | 1.03e-09 | 3 |
reticular formation | 1.03e-09 | 3 |
brain | 1.46e-08 | 47 |
future brain | 1.46e-08 | 47 |
ecto-epithelium | 2.14e-08 | 73 |
cerebellum | 4.12e-08 | 4 |
regional part of metencephalon | 4.12e-08 | 4 |
metencephalon | 4.12e-08 | 4 |
future metencephalon | 4.12e-08 | 4 |
rhombic lip | 4.12e-08 | 4 |
corpora quadrigemina | 7.68e-08 | 1 |
midbrain tectum | 7.68e-08 | 1 |
neural tube mantle layer | 7.68e-08 | 1 |
tectal plate | 7.68e-08 | 1 |
neural tube alar plate | 7.68e-08 | 1 |
regional part of brain | 9.96e-07 | 46 |