FFCP PHASE2:Hg19::chr12:46662913..46662948,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:81539 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:13447 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=81539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=13447 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 10:56, 18 September 2015
Short description: | p10@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC38A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000546893_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p10@SLC38A1 |
---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 6.56e-23 | 56 |
neural rod | 6.56e-23 | 56 |
future spinal cord | 6.56e-23 | 56 |
neural keel | 6.56e-23 | 56 |
central nervous system | 3.27e-22 | 81 |
nervous system | 2.28e-21 | 89 |
regional part of nervous system | 3.44e-21 | 53 |
regional part of brain | 3.44e-21 | 53 |
brain | 1.29e-19 | 68 |
future brain | 1.29e-19 | 68 |
Showing 1 to 10 of 35 entries