FFCP PHASE1:Mm9::chr17:10512189..10512245,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:10512189..10512245,-
|short_description=p1@Qk
|description=CAGE_peak_1_at_Qk_5end
|association_with_transcript=0bp_to_ENSMUST00000042296,ENSMUST0000004243...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19317 | |EntrezGene=19317 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2190 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QYS9,F8WHX7 | |UniProt=Q9QYS9,F8WHX7 | ||
|association_with_transcript=0bp_to_ENSMUST00000042296,ENSMUST00000042434,ENSMUST00000097414,ENSMUST00000115697,NM_001159516,NM_001159517,NM_021881,uc008akb.2,uc008akc.2,uc008ake.2,uc012ajv.1_5end | |||
|cluster_id=chr17:10512189..10512245,- | |||
|description=CAGE_peak_1_at_Qk_5end | |||
|id=chr17:10512189..10512245,- | |||
|ontology_enrichment_celltype=CL:0000221!7.04e-14!44;CL:0000133!7.04e-14!44;CL:0002319!2.95e-13!43;CL:0000540!2.02e-10!33;CL:0000047!2.02e-10!33;CL:0000031!2.02e-10!33;CL:0000404!2.02e-10!33;CL:0000055!2.11e-10!50;CL:0000117!1.47e-08!23;CL:0000337!1.47e-08!23;CL:0000393!3.57e-08!39;CL:0000211!3.57e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,7.03e-14,44;CL:0000133,7.03e-14,44;CL:0002319,2.95e-13,43;CL:0000540,2.02e-10,33;CL:0000047,2.02e-10,33;CL:0000031,2.02e-10,33;CL:0000404,2.02e-10,33;CL:0000117,1.47e-08,23;CL:0000337,1.47e-08,23;CL:0000393,3.56e-08,39;CL:0000211,3.56e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.23e-21!75;UBERON:0001016!5.23e-21!75;UBERON:0001017!7.81e-20!73;UBERON:0005743!7.81e-20!73;UBERON:0004121!1.37e-16!102;UBERON:0000924!1.37e-16!102;UBERON:0006601!1.37e-16!102;UBERON:0001049!3.99e-13!52;UBERON:0005068!3.99e-13!52;UBERON:0006241!3.99e-13!52;UBERON:0007135!3.99e-13!52;UBERON:0000025!2.93e-12!114;UBERON:0002020!4.81e-12!34;UBERON:0000955!5.06e-12!50;UBERON:0006238!5.06e-12!50;UBERON:0000033!1.04e-11!63;UBERON:0002616!1.38e-11!49;UBERON:0002346!3.17e-11!71;UBERON:0003075!3.17e-11!71;UBERON:0007284!3.17e-11!71;UBERON:0004111!3.97e-11!122;UBERON:0002791!3.08e-09!29;UBERON:0003528!3.08e-09!29;UBERON:0001893!3.08e-09!29;UBERON:0003080!6.20e-08!40;UBERON:0003056!1.36e-07!49;UBERON:0002780!1.80e-07!39;UBERON:0001890!1.80e-07!39;UBERON:0006240!1.80e-07!39;UBERON:0007100!3.94e-07!18;UBERON:0000948!3.94e-07!18;UBERON:0005498!3.94e-07!18;UBERON:0004140!3.94e-07!18;UBERON:0009881!3.94e-07!18;UBERON:0004141!3.94e-07!18;UBERON:0003084!3.94e-07!18;UBERON:0007005!3.94e-07!18;UBERON:0004139!3.94e-07!18;UBERON:0004291!3.94e-07!18;UBERON:0003076!7.73e-07!12;UBERON:0003057!7.73e-07!12;UBERON:0000956!8.42e-07!21;UBERON:0001869!8.42e-07!21;UBERON:0000203!8.42e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.21e-21,75;UBERON:0001017,7.79e-20,73;UBERON:0010314,1.01e-18,92;UBERON:0004121,3.28e-18,95;UBERON:0000924,3.28e-18,95;UBERON:0006601,3.28e-18,95;UBERON:0000073,2.37e-14,54;UBERON:0001049,3.98e-13,52;UBERON:0005068,3.98e-13,52;UBERON:0006241,3.98e-13,52;UBERON:0007135,3.98e-13,52;UBERON:0002346,6.62e-13,64;UBERON:0003075,6.62e-13,64;UBERON:0007284,6.62e-13,64;UBERON:0000025,2.93e-12,114;UBERON:0002020,4.80e-12,34;UBERON:0010371,5.49e-12,73;UBERON:0004111,3.97e-11,122;UBERON:0000955,2.81e-10,47;UBERON:0006238,2.81e-10,47;UBERON:0002616,7.35e-10,46;UBERON:0003528,3.08e-09,29;UBERON:0002791,3.08e-09,29;UBERON:0001893,3.08e-09,29;UBERON:0003080,6.19e-08,40;UBERON:0003056,1.36e-07,49;UBERON:0002780,1.80e-07,39;UBERON:0001890,1.80e-07,39;UBERON:0006240,1.80e-07,39;UBERON:0007100,3.94e-07,18;UBERON:0000948,3.94e-07,18;UBERON:0005498,3.94e-07,18;UBERON:0004140,3.94e-07,18;UBERON:0009881,3.94e-07,18;UBERON:0004141,3.94e-07,18;UBERON:0003084,3.94e-07,18;UBERON:0007005,3.94e-07,18;UBERON:0004139,3.94e-07,18;UBERON:0004291,3.94e-07,18;UBERON:0003076,7.73e-07,12;UBERON:0003057,7.73e-07,12;UBERON:0000956,8.42e-07,21;UBERON:0001869,8.42e-07,21;UBERON:0000203,8.42e-07,21 | |||
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| ||
|short_description=p1@Qk | |||
}} | }} |
Latest revision as of 22:46, 25 September 2015
Short description: | p1@Qk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Qk_5end |
Coexpression cluster: | MCL_coexpression_mm9:2190 |
Association with transcript: | 0bp_to_ENSMUST00000042296, ENSMUST00000042434, ENSMUST00000097414, ENSMUST00000115697, NM_001159516, NM_001159517, NM_021881, uc008akb.2, uc008akc.2, uc008ake.2, uc012ajv.1_5end |
EntrezGene: | Qk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 7.03e-14 | 44 |
neurectodermal cell | 7.03e-14 | 44 |
neural cell | 2.95e-13 | 43 |
neuron | 2.02e-10 | 33 |
neuronal stem cell | 2.02e-10 | 33 |
neuroblast | 2.02e-10 | 33 |
electrically signaling cell | 2.02e-10 | 33 |
CNS neuron (sensu Vertebrata) | 1.47e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.47e-08 | 23 |
electrically responsive cell | 3.56e-08 | 39 |
electrically active cell | 3.56e-08 | 39 |