Personal tools

FFCP PHASE1:Mm9::chr16:72663388..72663434,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr16:72663388..72663434,+ |short_description=p1@Robo1 |description=CAGE_peak_1_at_Robo1_5end |association_with_transcript=0bp_to_ENSMUST00000023600,ENSMUST0000...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr16:72663388..72663434,+
|DHSsupport=NA
|short_description=p1@Robo1
|DPIdataset=NA
|description=CAGE_peak_1_at_Robo1_5end
|association_with_transcript=0bp_to_ENSMUST00000023600,ENSMUST00000171732,NM_019413,uc007zqz.1,uc007zra.1,uc007zrb.1_5end
|EntrezGene=19876
|EntrezGene=19876
|HGNC=
|HGNC=
|MCL_coexpression_id=2184
|TSSclassifier=NA
|UniProt=G5E843,E9Q833,O89026,Q3UQ03,Q3UXH3,Q3V357,Q3UQW4
|UniProt=G5E843,E9Q833,O89026,Q3UQ03,Q3UXH3,Q3V357,Q3UQW4
|association_with_transcript=0bp_to_ENSMUST00000023600,ENSMUST00000171732,NM_019413,uc007zqz.1,uc007zra.1,uc007zrb.1_5end
|cluster_id=chr16:72663388..72663434,+
|description=CAGE_peak_1_at_Robo1_5end
|id=chr16:72663388..72663434,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!7.79e-13!333;UBERON:0000922!1.81e-10!328;UBERON:0005157!1.44e-07!27;UBERON:0000479!2.40e-07!349;UBERON:0004121!4.77e-07!102;UBERON:0000924!4.77e-07!102;UBERON:0006601!4.77e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0000922,2.47e-10,320;UBERON:0000479,3.68e-07,349
|phase1_expression=28.0260482433389,0,0.454999239389536,0,0,0,0.233612640595526,0,0,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,2.93993100536592,0.734187008646726,20.342174953049,1.74420125104357,0.439372365468944,1.55543919259427,6.99932108126813,4.31257693094915,0,0,0,7.20326420900652,8.02293631828519,3.6097046459421,24.2779753031517,31.739458756322,20.2826049121977,2.37191172448392,8.00365316500025,0,0,0,2.99600110518405,2.30530983192933,33.0769863264044,36.4516033495565,36.1758933524377,6.85562362569129,11.4851641294839,28.1728838194394,27.3159592401974,34.0110951045708,5.50579404996943,6.38436690425939,5.06901559745603,23.3438729282443,21.5910838901687,21.8783615633839,5.02529398202486,3.93933827022176,5.34793867218835,17.0884579574727,14.6642831223076,15.6575534493252,0.605809546665472,0.604572480854284,9.27566363845369,1.72084775396277,0,0,0.649776417447669,0.896053774194671,1.68533304158102,0.170430322578058,0,0,18.4504879907451,0,2.54805239706646,0,3.030874574157,4.81383744402687,3.53867111510348,1.48439043634778,3.88406825470758,39.3371668521786,21.8591511725331,37.4492538323934,46.8149459429799,50.6428072256812,41.6264023260395,43.6063071913974,0.988779870937496,1.3013942122792,0,11.8089800461609,6.62524555381181,5.81850303762267,1.86391761218122,3.22058876712702,4.1889341362691,0.510914110417183,0.11981512450592,0,0,4.04434726393021,5.94750783664214,16.0837570704466,4.69325664519146,6.13717097592793,3.1168206683934,6.00292673350703,9.87841829348068,6.96679035416521,0.505445516867349,1.89397670297827,23.4216797332867,14.2539304748753,13.3245976055958,11.3028613376786,14.6958838166868,21.5231050078548,21.3639931996182,5.69147415625834,24.1436152084783,49.9240051643043,51.9055816283649,23.8923348346057,33.9217644055229,21.5916343243743,23.2533814140976,20.1024609486678,0,0,0,14.9130556225561,23.4526059981096,17.6460820231795,18.9395788468168,15.1508458445501,8.17615698303105,6.51095045301142,8.58474884478781,5.7215017759913,6.08871444679878,2.95501435342371,2.43206428637567,2.19299981137998,1.09775057645525,1.8788898626452,9.67333763394985,10.3933658503077,0.660837565967596,1.05780226665418,31.1400845781442,32.9776074041823,27.9642391068943,16.7397325437374,12.4531704553127,11.0330863145284,3.32170343081158,6.75265714368445,6.53471542880701,5.57078121715222,4.874102177978,2.69645822596266,1.29682829924817,2.38969527905241,16.1217715810119,28.4478796398225,25.9227792048085,20.3651327845314,24.2440608959532,24.2669936820502,14.2914573900821,3.69025369949005,3.29697328466887,2.22114895059241,2.07516838961004,14.0149888801519,11.4004217165658,8.54476027062444,8.52012509831712,11.3353265083636,10.4396599230382,8.0554918486227,4.53978634970099,6.31491250332587,7.18841032636773,12.6527922207291,7.80094182786401,5.30415643688935,6.27890947326693,6.27176577772377,6.83586803616437,21.0335467065238,34.7115399821515,26.6499784667045,37.3157494778718,34.506289033014,26.8989314201196,17.1717610114863,31.8422991094506,36.9846031713454,25.8316725225129,7.86543910635542,8.28887912956299,8.96824163205372,0,0,0.983528546038072,3.31124095565679,3.05046120976805,4.10240903072711,0,4.29200576247434,11.3582958989852,13.2749173060857,14.4333676480975,11.2315335037699,11.8083297263669,9.34152551603147,11.334699646897,10.8134667427185,7.11518000303742,6.42642632843614,15.7553494581178,19.4091507997308,21.6639655940256,13.3625799607754,1.32745138339963,7.52619972080442,4.23252979750651,2.45186603682668,2.36241514304618,3.3817866273832,3.87642439752332,3.99887102425256,1.42598951353889,3.16036757935816,0,2.06271086496374,8.5109901438447,27.0091641046965,15.9111181052788,24.2200849585699,27.842416681837,21.5826269298505,16.9485491220185,8.82948352432338,2.58138878870081,2.75381692122966,0.882113592219848,14.5099902588502,30.5167766455261,35.1021223081867,31.6336711608312,34.1413071469727,2.33184669303881,5.7481843623258,1.02522528478712,22.4961686079913,7.9633646768976,1.50694765603753,0.820165366326151,1.60144721244566,0,0,0.276399947608848,0.954670618015114,34.3224553035532,28.6680448648857,26.7853245238067,23.626977449635,17.9057302271866,16.4534502589481,15.9521169549898,5.49687478166462,5.57344385154709,1.24267862617385,0.56369293868419,29.4547595706638,16.2149320647956,17.3061557626202,16.6616172286273,14.0233584157346,15.3737982625938,8.20287624516886,7.02557607652263,3.8653459332161,4.89651010638371,0.316011120628178,6.48720688928525,5.85452455839515,2.98817892848929,2.68540043501222,2.18549490259391,1.56254084375959,1.77227432609493,2.3222283488074,1.5241361331,1.41156659191577,1.26695244961678,1.53938946624527,1.5193997283604,3.62768613784338,0.221985953374065,0.358855426437903,0.167884616364078,6.37525660306228,3.56596703357246,15.0184331899157,10.7184189539533,1.50471631210609,2.25900737046827,5.06357760157895,2.29158205375759,2.23409137046794,3.42541259885321,2.2661816921691,4.05013500139084,2.70192721934532,6.34399372577886,2.5888015587591,15.1529527472898,53.8683579091392,33.8052539393186,20.4209642337367,11.1094976192831,9.37601893095072,15.1127774905098,16.0707344646337,15.4041220604071,18.699593670521,13.9413614939632,18.4853814558355,15.6381317474704,14.5977347483102,19.757801320731,20.4806287251722,16.4555742841695,19.2909220463705,15.6592642305257,16.9278758154557,16.4577241144999,13.8431128804283,16.4520971063651,16.2787986628208,17.2220166160055,18.6998283440605,14.8171658026946,11.5750673032651,16.4322977753493,15.1508413347589,13.7616621024042,14.3816544268323,21.2800142448238,15.9584946421545,17.9403148212461,21.9833308585392,18.9484602840781,14.6112316752843,10.9034349279241,11.6913452133343,7.18790290423307
|phase1_expression=28.0260482433389,0,0.454999239389536,0,0,0,0.233612640595526,0,0,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,2.93993100536592,0.734187008646726,20.342174953049,1.74420125104357,0.439372365468944,1.55543919259427,6.99932108126813,4.31257693094915,0,0,0,7.20326420900652,8.02293631828519,3.6097046459421,24.2779753031517,31.739458756322,20.2826049121977,2.37191172448392,8.00365316500025,0,0,0,2.99600110518405,2.30530983192933,33.0769863264044,36.4516033495565,36.1758933524377,6.85562362569129,11.4851641294839,28.1728838194394,27.3159592401974,34.0110951045708,5.50579404996943,6.38436690425939,5.06901559745603,23.3438729282443,21.5910838901687,21.8783615633839,5.02529398202486,3.93933827022176,5.34793867218835,17.0884579574727,14.6642831223076,15.6575534493252,0.605809546665472,0.604572480854284,9.27566363845369,1.72084775396277,0,0,0.649776417447669,0.896053774194671,1.68533304158102,0.170430322578058,0,0,18.4504879907451,0,2.54805239706646,0,3.030874574157,4.81383744402687,3.53867111510348,1.48439043634778,3.88406825470758,39.3371668521786,21.8591511725331,37.4492538323934,46.8149459429799,50.6428072256812,41.6264023260395,43.6063071913974,0.988779870937496,1.3013942122792,0,11.8089800461609,6.62524555381181,5.81850303762267,1.86391761218122,3.22058876712702,4.1889341362691,0.510914110417183,0.11981512450592,0,0,4.04434726393021,5.94750783664214,16.0837570704466,4.69325664519146,6.13717097592793,3.1168206683934,6.00292673350703,9.87841829348068,6.96679035416521,0.505445516867349,1.89397670297827,23.4216797332867,14.2539304748753,13.3245976055958,11.3028613376786,14.6958838166868,21.5231050078548,21.3639931996182,5.69147415625834,24.1436152084783,49.9240051643043,51.9055816283649,23.8923348346057,33.9217644055229,21.5916343243743,23.2533814140976,20.1024609486678,0,0,0,14.9130556225561,23.4526059981096,17.6460820231795,18.9395788468168,15.1508458445501,8.17615698303105,6.51095045301142,8.58474884478781,5.7215017759913,6.08871444679878,2.95501435342371,2.43206428637567,2.19299981137998,1.09775057645525,1.8788898626452,9.67333763394985,10.3933658503077,0.660837565967596,1.05780226665418,31.1400845781442,32.9776074041823,27.9642391068943,16.7397325437374,12.4531704553127,11.0330863145284,3.32170343081158,6.75265714368445,6.53471542880701,5.57078121715222,4.874102177978,2.69645822596266,1.29682829924817,2.38969527905241,16.1217715810119,28.4478796398225,25.9227792048085,20.3651327845314,24.2440608959532,24.2669936820502,14.2914573900821,3.69025369949005,3.29697328466887,2.22114895059241,2.07516838961004,14.0149888801519,11.4004217165658,8.54476027062444,8.52012509831712,11.3353265083636,10.4396599230382,8.0554918486227,4.53978634970099,6.31491250332587,7.18841032636773,12.6527922207291,7.80094182786401,5.30415643688935,6.27890947326693,6.27176577772377,6.83586803616437,21.0335467065238,34.7115399821515,26.6499784667045,37.3157494778718,34.506289033014,26.8989314201196,17.1717610114863,31.8422991094506,36.9846031713454,25.8316725225129,7.86543910635542,8.28887912956299,8.96824163205372,0,0,0.983528546038072,3.31124095565679,3.05046120976805,4.10240903072711,0,4.29200576247434,11.3582958989852,13.2749173060857,14.4333676480975,11.2315335037699,11.8083297263669,9.34152551603147,11.334699646897,10.8134667427185,7.11518000303742,6.42642632843614,15.7553494581178,19.4091507997308,21.6639655940256,13.3625799607754,1.32745138339963,7.52619972080442,4.23252979750651,2.45186603682668,2.36241514304618,3.3817866273832,3.87642439752332,3.99887102425256,1.42598951353889,3.16036757935816,0,2.06271086496374,8.5109901438447,27.0091641046965,15.9111181052788,24.2200849585699,27.842416681837,21.5826269298505,16.9485491220185,8.82948352432338,2.58138878870081,2.75381692122966,0.882113592219848,14.5099902588502,30.5167766455261,35.1021223081867,31.6336711608312,34.1413071469727,2.33184669303881,5.7481843623258,1.02522528478712,22.4961686079913,7.9633646768976,1.50694765603753,0.820165366326151,1.60144721244566,0,0,0.276399947608848,0.954670618015114,34.3224553035532,28.6680448648857,26.7853245238067,23.626977449635,17.9057302271866,16.4534502589481,15.9521169549898,5.49687478166462,5.57344385154709,1.24267862617385,0.56369293868419,29.4547595706638,16.2149320647956,17.3061557626202,16.6616172286273,14.0233584157346,15.3737982625938,8.20287624516886,7.02557607652263,3.8653459332161,4.89651010638371,0.316011120628178,6.48720688928525,5.85452455839515,2.98817892848929,2.68540043501222,2.18549490259391,1.56254084375959,1.77227432609493,2.3222283488074,1.5241361331,1.41156659191577,1.26695244961678,1.53938946624527,1.5193997283604,3.62768613784338,0.221985953374065,0.358855426437903,0.167884616364078,6.37525660306228,3.56596703357246,15.0184331899157,10.7184189539533,1.50471631210609,2.25900737046827,5.06357760157895,2.29158205375759,2.23409137046794,3.42541259885321,2.2661816921691,4.05013500139084,2.70192721934532,6.34399372577886,2.5888015587591,15.1529527472898,53.8683579091392,33.8052539393186,20.4209642337367,11.1094976192831,9.37601893095072,15.1127774905098,16.0707344646337,15.4041220604071,18.699593670521,13.9413614939632,18.4853814558355,15.6381317474704,14.5977347483102,19.757801320731,20.4806287251722,16.4555742841695,19.2909220463705,15.6592642305257,16.9278758154557,16.4577241144999,13.8431128804283,16.4520971063651,16.2787986628208,17.2220166160055,18.6998283440605,14.8171658026946,11.5750673032651,16.4322977753493,15.1508413347589,13.7616621024042,14.3816544268323,21.2800142448238,15.9584946421545,17.9403148212461,21.9833308585392,18.9484602840781,14.6112316752843,10.9034349279241,11.6913452133343,7.18790290423307
|short_description=p1@Robo1
}}
}}

Latest revision as of 17:48, 25 September 2015

Short description:p1@Robo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Robo1_5end
Coexpression cluster:MCL_coexpression_mm9:2184
Association with transcript: 0bp_to_ENSMUST00000023600, ENSMUST00000171732, NM_019413, uc007zqz.1, uc007zra.1, uc007zrb.1_5end
EntrezGene:Robo1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Robo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G728.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B720.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C324.28
Mouse Granule cells, donor2.CNhs12357.11731-123E331.74
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D533.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F536.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D936.18
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F227.32
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.01
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.34
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.88
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.45
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D739.34
adrenal gland, embryo E14.CNhs11038.406-44C521.86
adrenal gland, embryo E16.CNhs11004.1254-43D637.45
adrenal gland, embryo E17.CNhs11043.1263-45I146.81
adrenal gland, embryo E18.CNhs11026.1262-18F550.64
adrenal gland, neonate N00.CNhs11191.1311-23C141.63
adrenal gland, neonate N25.CNhs11223.1377-27I343.61
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F511.81
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F116.08
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B26.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.88
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.97
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C623.42
eyeball, embryo E14.CNhs10521.399-16E214.25
eyeball, embryo E15.CNhs10593.426-16C913.32
eyeball, embryo E17.CNhs11023.1261-18D411.30
eyeball, neonate N00.CNhs11207.633-15C614.70
eyeball, neonate N01.CNhs11140.1532-43E721.52
eyeball, neonate N02.CNhs11205.1551-44G821.36
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E224.14
forelimb, embryo E12.CNhs10600.359-14H249.92
forelimb, embryo E13.CNhs10589.384-1E251.91
forelimb, embryo E14.CNhs10577.413-26A823.89
forelimb, embryo E15.CNhs11007.437-20E733.92
forelimb, embryo E17.CNhs10598.1517-43C421.59
forelimb, embryo E18.CNhs11008.1520-43B523.25
gonad, embryo E13.CNhs11044.1564-45I620.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E914.91
heart, embryo E12.CNhs11015.353-12F523.45
heart, embryo E13.CNhs11013.376-3I917.65
heart, embryo E14.CNhs10597.403-26D418.94
heart, embryo E15.CNhs11017.431-16C815.15
heart, embryo E16.CNhs11021.457-17C68.18
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E35.72
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G12.43
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G110.39
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I531.14
intestine, embryo E13.CNhs11010.381-16D532.98
intestine, embryo E15.CNhs10602.976-16D827.96
intestine, embryo E16.CNhs10585.463-22H416.74
intestine, embryo E17.CNhs10582.482-18D312.45
intestine, embryo E18.CNhs10526.1289-20F711.03
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E96.75
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I916.12
kidney, embryo E15.CNhs10997.434-16F828.45
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I220.37
kidney, embryo E18.CNhs11001.1288-20C724.24
kidney, neonate N00.CNhs11214.646-21G724.27
kidney, neonate N10.CNhs11206.758-6D514.29
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F814.01
liver, embryo E13.CNhs10524.378-3H611.40
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D78.52
liver, embryo E16.CNhs10523.462-17F511.34
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F44.54
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B16.84
lung, embryo E12.CNhs10522.354-16G221.03
lung, embryo E14.CNhs10604.404-26F834.71
lung, embryo E15.CNhs11020.432-17C526.65
lung, embryo E16.CNhs10998.458-17B637.32
lung, embryo E17.CNhs10605.480-44A634.51
lung, embryo E18.CNhs10583.1287-20I626.90
lung, neonate N00.CNhs11224.640-42C617.17
lung, neonate N06.CNhs11212.683-20E531.84
lung, neonate N07.CNhs11111.715-19A336.98
lung, neonate N10.CNhs11219.750-23E625.83
lung, neonate N20.CNhs11109.822-18A47.87
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H28.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.23
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.33
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I715.76
ovary, embryo E18.CNhs11040.505-44H719.41
ovary, neonate N00.CNhs11217.1299-22I421.66
oviduct, adult pregnant day01.CNhs10500.988-6G613.36
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F47.53
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E627.01
pituitary gland, embryo E13.CNhs11009.370-44C715.91
pituitary gland, embryo E14.CNhs11037.398-44A524.22
pituitary gland, embryo E15.CNhs10592.427-16B927.84
pituitary gland, embryo E16.CNhs11036.449-43F621.58
pituitary gland, embryo E17.CNhs11039.1265-44F516.95
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C314.51
skin, neonate N00.CNhs11124.650-25G430.52
skin, neonate N03.CNhs11215.662-22H335.10
skin, neonate N06.CNhs11097.693-20I531.63
skin, neonate N10.CNhs11108.762-6C434.14
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C122.50
spleen, embryo E18.CNhs11011.1271-21F27.96
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E334.32
stomach, embryo E15.CNhs10603.1252-16G828.67
stomach, embryo E16.CNhs11022.459-17D426.79
stomach, embryo E17.CNhs11006.1035-18D523.63
stomach, embryo E18.CNhs10999.1286-20C617.91
stomach, neonate N03.CNhs11193.1340-24B816.45
stomach, neonate N07.CNhs11210.718-18A915.95
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F529.45
testis, embryo E15.CNhs11034.443-27C516.21
testis, embryo E16.CNhs11033.470-26G517.31
testis, embryo E17.CNhs11029.486-18I516.66
testis, embryo E18.CNhs11027.503-18G514.02
testis, neonate N00.CNhs11189.1300-22B715.37
testis, neonate N07.CNhs11222.726-26I48.20
testis, neonate N10.CNhs11204.763-44D97.03
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I25.85
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E46.38
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E515.02
vagina, adult.CNhs10502.89-27D510.72
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I815.15
whole body, embryo E12.CNhs10587.857-27C953.87
whole body, embryo E13.CNhs10512.372-23H233.81
whole body, embryo E14.5.CNhs10578.420-27D220.42
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.70
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.64
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.29
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.96
whole body, embryo E17.5.CNhs10513.490-9F917.94
whole body, embryo E17.CNhs10517.475-3I521.98
whole body, embryo E18.CNhs10516.493-3B318.95
whole body, neonate N00.CNhs10525.657-19C214.61
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D111.69
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
embryo2.47e-10320
tissue3.68e-07349
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:72663388..72663434,%2B&oldid=4205462"