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FFCP PHASE1:Mm9::chr16:5885014..5885055,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:5885014..5885055,+
|DHSsupport=NA
|short_description=p8@Rbfox1
|DPIdataset=NA
|description=CAGE_peak_8_at_Rbfox1_5end
|association_with_transcript=128bp_to_NM_021477,uc007ycb.2,uc007ycc.2,uc012abb.1_5end
|EntrezGene=268859
|EntrezGene=268859
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9JJ43
|UniProt=Q9JJ43
|association_with_transcript=128bp_to_NM_021477,uc007ycb.2,uc007ycc.2,uc012abb.1_5end
|cluster_id=chr16:5885014..5885055,+
|description=CAGE_peak_8_at_Rbfox1_5end
|id=chr16:5885014..5885055,+
|ontology_enrichment_celltype=CL:0000540!3.33e-16!33;CL:0000047!3.33e-16!33;CL:0000031!3.33e-16!33;CL:0000404!3.33e-16!33;CL:0000117!4.02e-15!23;CL:0000337!4.02e-15!23;CL:0000393!1.25e-11!39;CL:0000211!1.25e-11!39;CL:0002319!1.33e-10!43;CL:0000221!4.55e-10!44;CL:0000133!4.55e-10!44;CL:0000055!2.08e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.86e-23,23;CL:0000337,7.86e-23,23;CL:0000540,1.42e-22,33;CL:0000047,1.42e-22,33;CL:0000031,1.42e-22,33;CL:0000404,1.42e-22,33;CL:0000393,1.07e-17,39;CL:0000211,1.07e-17,39;CL:0002319,3.15e-15,43;CL:0000221,1.10e-14,44;CL:0000133,1.10e-14,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.62e-26!73;UBERON:0005743!1.62e-26!73;UBERON:0000073!9.91e-26!75;UBERON:0001016!9.91e-26!75;UBERON:0002346!1.03e-23!71;UBERON:0003075!1.03e-23!71;UBERON:0007284!1.03e-23!71;UBERON:0001049!8.20e-22!52;UBERON:0005068!8.20e-22!52;UBERON:0006241!8.20e-22!52;UBERON:0007135!8.20e-22!52;UBERON:0002020!4.04e-21!34;UBERON:0004121!1.46e-20!102;UBERON:0000924!1.46e-20!102;UBERON:0006601!1.46e-20!102;UBERON:0000955!2.68e-20!50;UBERON:0006238!2.68e-20!50;UBERON:0002616!1.62e-19!49;UBERON:0000033!1.20e-17!63;UBERON:0002791!1.43e-17!29;UBERON:0003528!1.43e-17!29;UBERON:0001893!1.43e-17!29;UBERON:0003080!3.72e-16!40;UBERON:0003056!4.27e-16!49;UBERON:0002780!1.90e-15!39;UBERON:0001890!1.90e-15!39;UBERON:0006240!1.90e-15!39;UBERON:0000956!1.73e-12!21;UBERON:0001869!1.73e-12!21;UBERON:0000203!1.73e-12!21;UBERON:0002619!5.64e-10!17;UBERON:0002021!3.29e-09!10;UBERON:0000411!3.29e-09!10;UBERON:0001950!3.29e-09!10;UBERON:0007811!1.29e-08!86;UBERON:0000153!7.31e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.90e-38,73;UBERON:0001016,1.42e-36,75;UBERON:0000073,2.07e-34,54;UBERON:0002020,3.28e-33,34;UBERON:0001049,1.93e-32,52;UBERON:0005068,1.93e-32,52;UBERON:0006241,1.93e-32,52;UBERON:0007135,1.93e-32,52;UBERON:0002346,1.33e-29,64;UBERON:0003075,1.33e-29,64;UBERON:0007284,1.33e-29,64;UBERON:0003528,1.33e-27,29;UBERON:0002791,1.33e-27,29;UBERON:0001893,1.33e-27,29;UBERON:0000955,4.31e-27,47;UBERON:0006238,4.31e-27,47;UBERON:0004121,1.35e-26,95;UBERON:0000924,1.35e-26,95;UBERON:0006601,1.35e-26,95;UBERON:0002616,6.67e-26,46;UBERON:0010371,3.62e-24,73;UBERON:0003080,7.42e-23,40;UBERON:0002780,9.18e-22,39;UBERON:0001890,9.18e-22,39;UBERON:0006240,9.18e-22,39;UBERON:0000956,1.41e-19,21;UBERON:0001869,1.41e-19,21;UBERON:0000203,1.41e-19,21;UBERON:0003056,4.39e-18,49;UBERON:0010314,4.99e-18,92;UBERON:0002619,1.30e-15,17;UBERON:0002021,1.50e-13,10;UBERON:0000411,1.50e-13,10;UBERON:0001950,1.50e-13,10;UBERON:0003076,6.87e-10,12;UBERON:0003057,6.87e-10,12;UBERON:0002420,4.82e-09,8;UBERON:0007245,4.82e-09,8;UBERON:0010009,4.82e-09,8;UBERON:0010011,4.82e-09,8;UBERON:0000454,4.82e-09,8;UBERON:0000025,6.07e-08,114;UBERON:0002240,1.11e-07,6;UBERON:0005174,1.11e-07,6;UBERON:0001137,1.11e-07,6
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04632921719196,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0.384218305321555,4.14758449233911,4.3201900266141,2.52389953621658,4.85606673486466,4.8591079009355,2.20483438586917,1.91690942036473,7.35375029288017,1.10115880999389,8.93811366596314,8.1411462625809,4.08847491963601,4.20843160571084,4.16730696445408,6.14202597803038,5.06486349028512,4.5839474333043,6.77645746589436,7.68807076315156,6.89677949553612,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0.693941307064543,0.913396434936424,0.230615497256059,1.20578112442098,1.05829836422134,0,0,0.144599356919912,0,0,0,0,0,11.4184510834503,13.823482649688,0.255457055208591,0,0,0,7.48953197024113,7.77751024791665,4.39790232395025,13.5582969749976,8.69432554923124,6.44142938134636,9.5722345209977,0.305518091550949,0,0,0.420883711772948,0,0,0.180062129805349,0.60281927134286,0.340182495756639,0.2562274405697,0.374806898238915,1.81092359517311,0,0,0,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0,0,0.32833492815819,0,0,0,0,10.3042074796422,5.65975368086064,0,0,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0.502670417600539,0.795825888164603,0,0,0,0,0,0.456994050438915,0,0.610953983535943,0.581857461502877,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,7.3843362553088,0,0,1.26203287766503,1.56175497718655,5.60100834105277,0.955875191810208,1.55959071857676,1.13230612315533,0,1.16902343164525,0.395287777946524,9.3183181762324,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0.582961673259701,6.67531087237835,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.827292452285488,0.388902376688095,0.258319646955462,0.675824501963113,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,11.9684561491866,17.7597609166213,19.7631159695241,9.59115527678899,6.0431511791176,6.07520250208625,6.75481804836331,11.3285602246051,10.3552062350364,0,0,1.36586884603307,0.729320151204882,0.209613162627982,1.10306105070008,1.55572709461131,1.03017528619447,1.60459604795908,1.51618327058278,0.760437899670719,0.943131706930381,1.591905626988,1.47257850531199,1.20614484806788,1.90517476513229,1.50649623728312,1.92909220463705,0.824171801606613,1.17759136107518,0,0.532427418478012,0.953744759789284,1.16277133305863,1.59985946706062,1.52306294205018,1.09756783723664,0.526139422875686,2.17286582153379,1.68342681497322,1.18635018124174,0.886540341380071,2.04615521584845,0.77468420592983,1.15743966588685,1.74867404556562,1.16965804222704,0.859484216193193,0.382576664137687,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04632921719196,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0.384218305321555,4.14758449233911,4.3201900266141,2.52389953621658,4.85606673486466,4.8591079009355,2.20483438586917,1.91690942036473,7.35375029288017,1.10115880999389,8.93811366596314,8.1411462625809,4.08847491963601,4.20843160571084,4.16730696445408,6.14202597803038,5.06486349028512,4.5839474333043,6.77645746589436,7.68807076315156,6.89677949553612,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0.693941307064543,0.913396434936424,0.230615497256059,1.20578112442098,1.05829836422134,0,0,0.144599356919912,0,0,0,0,0,11.4184510834503,13.823482649688,0.255457055208591,0,0,0,7.48953197024113,7.77751024791665,4.39790232395025,13.5582969749976,8.69432554923124,6.44142938134636,9.5722345209977,0.305518091550949,0,0,0.420883711772948,0,0,0.180062129805349,0.60281927134286,0.340182495756639,0.2562274405697,0.374806898238915,1.81092359517311,0,0,0,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0,0,0.32833492815819,0,0,0,0,10.3042074796422,5.65975368086064,0,0,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0.502670417600539,0.795825888164603,0,0,0,0,0,0.456994050438915,0,0.610953983535943,0.581857461502877,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,7.3843362553088,0,0,1.26203287766503,1.56175497718655,5.60100834105277,0.955875191810208,1.55959071857676,1.13230612315533,0,1.16902343164525,0.395287777946524,9.3183181762324,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0.582961673259701,6.67531087237835,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.827292452285488,0.388902376688095,0.258319646955462,0.675824501963113,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,11.9684561491866,17.7597609166213,19.7631159695241,9.59115527678899,6.0431511791176,6.07520250208625,6.75481804836331,11.3285602246051,10.3552062350364,0,0,1.36586884603307,0.729320151204882,0.209613162627982,1.10306105070008,1.55572709461131,1.03017528619447,1.60459604795908,1.51618327058278,0.760437899670719,0.943131706930381,1.591905626988,1.47257850531199,1.20614484806788,1.90517476513229,1.50649623728312,1.92909220463705,0.824171801606613,1.17759136107518,0,0.532427418478012,0.953744759789284,1.16277133305863,1.59985946706062,1.52306294205018,1.09756783723664,0.526139422875686,2.17286582153379,1.68342681497322,1.18635018124174,0.886540341380071,2.04615521584845,0.77468420592983,1.15743966588685,1.74867404556562,1.16965804222704,0.859484216193193,0.382576664137687,0,0.231867835620421
|short_description=p8@Rbfox1
}}
}}

Latest revision as of 16:53, 25 September 2015

Short description:p8@Rbfox1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Rbfox1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 128bp_to_NM_021477, uc007ycb.2, uc007ycc.2, uc012abb.1_5end
EntrezGene:Rbfox1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Rbfox1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.90
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I213.82
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.55
medulla oblongata, neonate N30.CNhs11200.1396-42A37.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.86e-2323
neuroblast (sensu Vertebrata)7.86e-2323
neuron1.42e-2233
neuronal stem cell1.42e-2233
neuroblast1.42e-2233
electrically signaling cell1.42e-2233
electrically responsive cell1.07e-1739
electrically active cell1.07e-1739
neural cell3.15e-1543
ectodermal cell1.10e-1444
neurectodermal cell1.10e-1444

Uber anatomy
Ontology termp-valuen
central nervous system4.90e-3873
nervous system1.42e-3675
regional part of nervous system2.07e-3454
gray matter3.28e-3334
neural tube1.93e-3252
neural rod1.93e-3252
future spinal cord1.93e-3252
neural keel1.93e-3252
neurectoderm1.33e-2964
neural plate1.33e-2964
presumptive neural plate1.33e-2964
brain grey matter1.33e-2729
regional part of telencephalon1.33e-2729
telencephalon1.33e-2729
brain4.31e-2747
future brain4.31e-2747
ectoderm-derived structure1.35e-2695
ectoderm1.35e-2695
presumptive ectoderm1.35e-2695
regional part of brain6.67e-2646
ecto-epithelium3.62e-2473
anterior neural tube7.42e-2340
regional part of forebrain9.18e-2239
forebrain9.18e-2239
future forebrain9.18e-2239
cerebral cortex1.41e-1921
cerebral hemisphere1.41e-1921
pallium1.41e-1921
pre-chordal neural plate4.39e-1849
structure with developmental contribution from neural crest4.99e-1892
regional part of cerebral cortex1.30e-1517
occipital lobe1.50e-1310
visual cortex1.50e-1310
neocortex1.50e-1310
posterior neural tube6.87e-1012
chordal neural plate6.87e-1012
basal ganglion4.82e-098
nuclear complex of neuraxis4.82e-098
aggregate regional part of brain4.82e-098
collection of basal ganglia4.82e-098
cerebral subcortex4.82e-098
tube6.07e-08114
spinal cord1.11e-076
dorsal region element1.11e-076
dorsum1.11e-076
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