FFCP PHASE2:Hg19::chr10:99790340..99790353,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:55118 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14882 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=55118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14882 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9NQ79 | ||
|association_with_transcript=231bp_to_ENST00000298819,ENST00000370591,ENST00000370597,NM_001206528,NM_018058,uc001kou.1_5end | |association_with_transcript=231bp_to_ENST00000298819,ENST00000370591,ENST00000370597,NM_001206528,NM_018058,uc001kou.1_5end | ||
|cluster_id=chr10:99790340..99790353,- | |cluster_id=chr10:99790340..99790353,- |
Latest revision as of 07:30, 20 September 2015
Short description: | p2@CRTAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRTAC1_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 231bp_to_ENST00000298819, ENST00000370591, ENST00000370597, NM_001206528, NM_018058, uc001kou.1_5end |
EntrezGene: | CRTAC1 |
HGNC: | 14882 |
UniProt: | Q9NQ79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@CRTAC1 |
---|
0
100
200
300
400
500
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-72 | 114 |
neural tube | 6.91e-58 | 56 |
neural rod | 6.91e-58 | 56 |
future spinal cord | 6.91e-58 | 56 |
neural keel | 6.91e-58 | 56 |
central nervous system | 9.41e-54 | 81 |
regional part of nervous system | 4.23e-53 | 53 |
regional part of brain | 4.23e-53 | 53 |
nervous system | 1.59e-48 | 89 |
brain | 1.10e-46 | 68 |
Showing 1 to 10 of 75 entries