FFCP PHASE1:Mm9::chr16:17070313..17070332,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:17070313..17070332,+
|short_description=p2@Ypel1
|description=CAGE_peak_2_at_Ypel1_5end
|association_with_transcript=0bp_to_ENSMUST00000134036,ENSMUST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=106369 | |EntrezGene=106369 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ESC7,D3Z104 | |UniProt=Q9ESC7,D3Z104 | ||
|association_with_transcript=0bp_to_ENSMUST00000134036,ENSMUST00000141959_5end | |||
|cluster_id=chr16:17070313..17070332,+ | |||
|description=CAGE_peak_2_at_Ypel1_5end | |||
|id=chr16:17070313..17070332,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.42e-10!33;CL:0000047!1.42e-10!33;CL:0000031!1.42e-10!33;CL:0000404!1.42e-10!33;CL:0000221!6.08e-09!44;CL:0000133!6.08e-09!44;CL:0002319!1.18e-08!43;CL:0000393!1.50e-07!39;CL:0000211!1.50e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.66e-11,33;CL:0000047,1.66e-11,33;CL:0000031,1.66e-11,33;CL:0000404,1.66e-11,33;CL:0000221,1.93e-08,44;CL:0000133,1.93e-08,44;CL:0002319,3.96e-08,43;CL:0000393,8.36e-08,39;CL:0000211,8.36e-08,39;CL:0000117,3.96e-07,23;CL:0000337,3.96e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.36e-14!102;UBERON:0000924!2.36e-14!102;UBERON:0006601!2.36e-14!102;UBERON:0001017!2.33e-13!73;UBERON:0005743!2.33e-13!73;UBERON:0003056!4.02e-13!49;UBERON:0000073!1.12e-12!75;UBERON:0001016!1.12e-12!75;UBERON:0002346!1.16e-12!71;UBERON:0003075!1.16e-12!71;UBERON:0007284!1.16e-12!71;UBERON:0002780!6.13e-11!39;UBERON:0001890!6.13e-11!39;UBERON:0006240!6.13e-11!39;UBERON:0002020!6.83e-11!34;UBERON:0003080!1.91e-10!40;UBERON:0002791!1.06e-09!29;UBERON:0003528!1.06e-09!29;UBERON:0001893!1.06e-09!29;UBERON:0000033!1.08e-09!63;UBERON:0001049!3.16e-09!52;UBERON:0005068!3.16e-09!52;UBERON:0006241!3.16e-09!52;UBERON:0007135!3.16e-09!52;UBERON:0000956!5.56e-09!21;UBERON:0001869!5.56e-09!21;UBERON:0000203!5.56e-09!21;UBERON:0000153!2.19e-07!94;UBERON:0000955!3.52e-07!50;UBERON:0006238!3.52e-07!50;UBERON:0002616!4.54e-07!49;UBERON:0002619!9.71e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.72e-13,49;UBERON:0001017,2.32e-13,73;UBERON:0002346,4.16e-13,64;UBERON:0003075,4.16e-13,64;UBERON:0007284,4.16e-13,64;UBERON:0004121,6.23e-13,95;UBERON:0000924,6.23e-13,95;UBERON:0006601,6.23e-13,95;UBERON:0001016,2.14e-12,75;UBERON:0010371,7.77e-12,73;UBERON:0002020,1.93e-11,34;UBERON:0002780,2.12e-11,39;UBERON:0001890,2.12e-11,39;UBERON:0006240,2.12e-11,39;UBERON:0003080,9.42e-11,40;UBERON:0003528,4.48e-10,29;UBERON:0002791,4.48e-10,29;UBERON:0001893,4.48e-10,29;UBERON:0000956,1.42e-09,21;UBERON:0001869,1.42e-09,21;UBERON:0000203,1.42e-09,21;UBERON:0001049,3.13e-09,52;UBERON:0005068,3.13e-09,52;UBERON:0006241,3.13e-09,52;UBERON:0007135,3.13e-09,52;UBERON:0010314,8.38e-09,92;UBERON:0000955,1.70e-08,47;UBERON:0006238,1.70e-08,47;UBERON:0002616,2.27e-08,46;UBERON:0000073,2.49e-08,54;UBERON:0002619,4.79e-07,17 | |||
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| ||
|short_description=p2@Ypel1 | |||
}} | }} |
Latest revision as of 16:22, 1 October 2015
Short description: | p2@Ypel1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ypel1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000134036, ENSMUST00000141959_5end |
EntrezGene: | Ypel1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.66e-11 | 33 |
neuronal stem cell | 1.66e-11 | 33 |
neuroblast | 1.66e-11 | 33 |
electrically signaling cell | 1.66e-11 | 33 |
ectodermal cell | 1.93e-08 | 44 |
neurectodermal cell | 1.93e-08 | 44 |
neural cell | 3.96e-08 | 43 |
electrically responsive cell | 8.36e-08 | 39 |
electrically active cell | 8.36e-08 | 39 |
CNS neuron (sensu Vertebrata) | 3.96e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.96e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.72e-13 | 49 |
central nervous system | 2.32e-13 | 73 |
neurectoderm | 4.16e-13 | 64 |
neural plate | 4.16e-13 | 64 |
presumptive neural plate | 4.16e-13 | 64 |
ectoderm-derived structure | 6.23e-13 | 95 |
ectoderm | 6.23e-13 | 95 |
presumptive ectoderm | 6.23e-13 | 95 |
nervous system | 2.14e-12 | 75 |
ecto-epithelium | 7.77e-12 | 73 |
gray matter | 1.93e-11 | 34 |
regional part of forebrain | 2.12e-11 | 39 |
forebrain | 2.12e-11 | 39 |
future forebrain | 2.12e-11 | 39 |
anterior neural tube | 9.42e-11 | 40 |
brain grey matter | 4.48e-10 | 29 |
regional part of telencephalon | 4.48e-10 | 29 |
telencephalon | 4.48e-10 | 29 |
cerebral cortex | 1.42e-09 | 21 |
cerebral hemisphere | 1.42e-09 | 21 |
pallium | 1.42e-09 | 21 |
neural tube | 3.13e-09 | 52 |
neural rod | 3.13e-09 | 52 |
future spinal cord | 3.13e-09 | 52 |
neural keel | 3.13e-09 | 52 |
structure with developmental contribution from neural crest | 8.38e-09 | 92 |
brain | 1.70e-08 | 47 |
future brain | 1.70e-08 | 47 |
regional part of brain | 2.27e-08 | 46 |
regional part of nervous system | 2.49e-08 | 54 |
regional part of cerebral cortex | 4.79e-07 | 17 |