FFCP PHASE2:Hg19::chr10:30348439..30348531,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:57608 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:29283 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=57608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=29283 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9P266 | ||
|association_with_transcript=0bp_to_ENST00000375377,NM_020848,uc001iuy.2,uc009xle.1_5end | |association_with_transcript=0bp_to_ENST00000375377,NM_020848,uc001iuy.2,uc009xle.1_5end | ||
|cluster_id=chr10:30348439..30348531,- | |cluster_id=chr10:30348439..30348531,- |
Latest revision as of 21:40, 17 September 2015
Short description: | p1@KIAA1462 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA1462_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375377, NM_020848, uc001iuy.2, uc009xle.1_5end |
EntrezGene: | KIAA1462 |
HGNC: | 29283 |
UniProt: | Q9P266 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@KIAA1462 |
---|
0
20
40
60
80
100
120
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.85e-11 | 76 |
endothelial cell of vascular tree | 1.77e-10 | 24 |
endothelial cell | 6.57e-10 | 36 |
meso-epithelial cell | 1.04e-09 | 45 |
mesodermal cell | 3.55e-09 | 121 |
blood vessel endothelial cell | 8.89e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.89e-08 | 18 |
lining cell | 9.06e-07 | 58 |
barrier cell | 9.06e-07 | 58 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 5.39e-15 | 240 |
adult organism | 1.62e-14 | 114 |
tube | 7.11e-13 | 192 |
cell layer | 1.75e-12 | 309 |
vasculature | 1.88e-12 | 78 |
vascular system | 1.88e-12 | 78 |
epithelium | 1.12e-11 | 306 |
vessel | 2.11e-11 | 68 |
splanchnic layer of lateral plate mesoderm | 3.09e-11 | 83 |
circulatory system | 6.80e-11 | 112 |
Showing 1 to 10 of 24 entries