Personal tools

FFCP PHASE1:Mm9::chr15:96472712..96472741,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr15:96472712..96472741,- |short_description=p4@Slc38a1 |description=CAGE_peak_4_at_Slc38a1_5end |association_with_transcript=32bp_to_ENSMUST00000088454,NM_001...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr15:96472712..96472741,-
|DHSsupport=NA
|short_description=p4@Slc38a1
|DPIdataset=NA
|description=CAGE_peak_4_at_Slc38a1_5end
|association_with_transcript=32bp_to_ENSMUST00000088454,NM_001166456,uc007xki.2,uc007xkk.2,uc007xkl.2_5end
|EntrezGene=105727
|EntrezGene=105727
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q8K2P7
|UniProt=Q8K2P7
|association_with_transcript=32bp_to_ENSMUST00000088454,NM_001166456,uc007xki.2,uc007xkk.2,uc007xkl.2_5end
|cluster_id=chr15:96472712..96472741,-
|description=CAGE_peak_4_at_Slc38a1_5end
|id=chr15:96472712..96472741,-
|ontology_enrichment_celltype=CL:0000084!8.56e-07!11;CL:0000827!8.56e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000084,8.00e-07,11;CL:0000827,8.00e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!2.42e-07!94;UBERON:0007811!6.23e-07!86
|ontology_enrichment_uberon_v019_2=
|phase1_expression=1.28119077683835,3.14077866875425,0.909998478779072,0.30246421130683,2.00358291978539,2.85394762250213,6.30754129607919,4.51931632045517,176.126691411735,195.209814952543,34.586029581552,32.4672687111019,6.50562773738582,5.68232615723483,3.99731714178795,3.44207954562704,2.09868563438444,3.62781490161973,3.29074640653773,3.39511721438424,2.97651515528744,10.425549876093,8.097193463307,2.55987876469451,2.75291137280604,1.14846392823004,2.58457197695445,3.878482188346,2.66032787238923,1.76421090831952,4.8780712344167,1.27006134691926,4.92051830067656,0,3.17736781726402,5.31950865147176,2.45003227514843,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0.183546752161682,0.782391344348039,9.59310688073965,10.5449367712546,11.8602238435313,11.7588594165305,7.18762821824858,3.52343472721246,8.70434570413613,5.71359458542189,1.02903774414379,0.85960031981627,1.54701627683233,5.66486090406874,5.28990979272033,5.70448263155561,1.35537812827653,0,0,0,0.7104801149461,8.38880309451533,12.6792040756113,2.69592992002042,3.24014251996058,3.57552434297349,5.42736870367227,3.97563373712904,3.42974237801871,2.20444583341944,0,12.1127469099328,9.70423769447427,7.0659005297872,3.95658863190582,4.57438218012048,3.12548022334056,9.49222196604695,4.50210088025344,7.48711414106369,4.41942878210502,5.97961059356232,4.47358669980721,1.13589289999776,0.529000920747499,0.289864488701678,0,0,0,0,0,2.38755514223978,0,0,0,1.26759077799012,0,0,0,1.29894624606728,0.760079596425296,3.0331466700887,1.02765491747154,12.6879562987114,1.7813056687779,2.60227990149204,2.13125834818499,2.7673859670727,2.56228488939458,3.76283862834255,0.628332956648377,10.3821886448437,2.60278842455841,4.42305275974937,1.29413479957927,1.54589062922275,2.90925151881133,9.31958806090611,21.6657789788545,9.21565509979202,3.57639877292028,8.2672435909085,4.79922184794726,4.82866862877646,9.58660092190865,5.03250663100489,2.63874139437015,4.86708096538374,2.04572365864264,10.5971902725376,4.2182728397617,1.32391173005411,1.11966273549084,0,2.52530227063769,2.60240885925407,2.5289231487682,2.88099407688559,2.71268672104287,1.90502197623718,2.562274405697,1.87403449119458,3.10444044886819,6.46703978798527,5.29497024469894,2.28736461413134,3.06874025398605,3.61461423993277,2.089512999133,0.411564272815887,1.99034266818493,3.51106593656617,2.83082697826187,5.11494298912067,3.93538967817454,4.92504725960302,4.32148947506436,2.60419209143731,2.75469924446365,2.1597395804233,3.72054311600653,1.87791380979733,1.86824547787471,3.62031669809657,3.2833492815819,2.1888578577381,2.19299981137998,4.17145219052996,2.54992195644706,3.15434922846191,3.2929475961371,5.61711931072457,5.81791246659797,2.98603550749328,5.10920678092965,4.51036114627327,6.25218926332362,5.55945109612176,7.22857379227725,6.16887780007865,3.95277491337626,4.52403375840485,6.96347652144028,6.23885078781184,3.59527763461689,4.75503709724327,4.77939055810481,2.65535061334314,2.85621281524322,2.25415471346161,1.4255592949172,2.13347735884388,1.82353131714828,1.45444035385792,1.47610147979602,1.09899109488962,0.987177311374404,0,3.83743743147016,4.71741588271687,4.49724224769707,1.82574109249653,2.17059443777175,0.763877555344259,1.72617682470486,1.45921704097532,0,0,2.23284568601102,0.624075346229121,0,0,0,2.40179147216586,2.4633883530163,3.7481944581666,2.03694102930226,3.98973422090454,1.17254380209271,1.6663054862021,1.56106918286239,0.157635144106191,0.221464689648775,0.956728611944923,2.29408640602033,1.72684981865896,2.02508682014116,0,2.17562273527484,1.47529281905711,1.10374698521893,9.31193421929193,9.25972324078405,2.78689407140348,0,0.94652465824877,2.34263246577983,1.07711698866399,2.86762557543062,1.11399337041197,0.566153061577665,1.21443210502468,0.292255857911312,1.58115111178609,11.2462460747632,5.81954349353901,0.712262414669021,1.79175655288934,8.41347627159931,0,3.8844901784797,0.906970670894253,3.39489143560617,3.83892460745005,1.53717573971964,3.6179961043551,5.45300594216258,2.85197902707777,3.47640433729398,2.10837217149998,0,2.7235168460303,2.88097750450096,2.45781499187234,1.92903331528433,3.01478397191865,2.67553226403106,2.96188237083818,1.2178597964584,30.7419937563461,57.8301553458229,13.0111754852428,0.16488625294148,0.322928853391811,0.663442174209714,0.238744688006273,0.656563598980245,7.57850175237612,11.6817940266621,4.61351378154202,2.27025554759545,3.88908507476395,3.20226376907975,2.7338845544205,3.43167259809784,11.728511669576,9.37674730568509,10.0885980877229,0.954670618015114,4.4287039101359,3.25311147402958,3.67218158794124,3.3454127362315,4.58561383866973,6.60835297285622,4.21532624199213,1.83229159388821,4.14767914533737,4.97071450469541,0,3.73791365109947,3.47462829959905,3.11121901350476,3.87479470433193,2.87225413334323,1.76035857968631,0.39061315453185,0.419437377702843,0.241584120826006,0,2.52808896502543,3.24360344464263,5.6491026440655,8.18501184760109,6.80301443536429,6.35780335300048,6.37035882455835,5.46451250545936,5.95702054694071,4.19137436602499,4.43635214602098,5.06780979846713,5.8689223400601,4.44132228289962,1.81384306892169,12.6531993423217,12.5599399253266,10.4088462145729,3.28422309854724,21.2081197259836,9.70703608616505,4.93047271881851,4.51414893631827,1.6942555278512,1.84130094602871,5.15605962095457,2.40594455281163,2.05524755931193,1.5107877947794,1.35004500046361,3.15224842256954,3.62513927187364,2.07104124700728,3.42498247027783,5.1873233542134,2.73173769206615,3.16038732188782,1.46729213839588,1.65459157605013,2.22246727801615,2.67845574410562,1.60459604795908,2.27427490587418,1.2673964994512,1.88626341386076,1.96647165686753,1.92075457214608,2.46972516509137,2.38146845641537,0.927074607558844,2.31491064556446,0.412085900803307,1.91358596174717,2.40008476669791,1.77475806159337,1.43061713968393,1.59881058295561,2.72917203204459,1.94613598150856,1.09756783723664,1.8414879800649,1.22223702461276,1.68342681497322,1.42362021749009,1.37906275325789,2.86461730218783,0.77468420592983,1.54325288784913,2.24829520144151,2.33931608445408,1.71896843238639,1.53030665655075,1.54413993383661,0.463735671240843
|phase1_expression=1.28119077683835,3.14077866875425,0.909998478779072,0.30246421130683,2.00358291978539,2.85394762250213,6.30754129607919,4.51931632045517,176.126691411735,195.209814952543,34.586029581552,32.4672687111019,6.50562773738582,5.68232615723483,3.99731714178795,3.44207954562704,2.09868563438444,3.62781490161973,3.29074640653773,3.39511721438424,2.97651515528744,10.425549876093,8.097193463307,2.55987876469451,2.75291137280604,1.14846392823004,2.58457197695445,3.878482188346,2.66032787238923,1.76421090831952,4.8780712344167,1.27006134691926,4.92051830067656,0,3.17736781726402,5.31950865147176,2.45003227514843,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0.183546752161682,0.782391344348039,9.59310688073965,10.5449367712546,11.8602238435313,11.7588594165305,7.18762821824858,3.52343472721246,8.70434570413613,5.71359458542189,1.02903774414379,0.85960031981627,1.54701627683233,5.66486090406874,5.28990979272033,5.70448263155561,1.35537812827653,0,0,0,0.7104801149461,8.38880309451533,12.6792040756113,2.69592992002042,3.24014251996058,3.57552434297349,5.42736870367227,3.97563373712904,3.42974237801871,2.20444583341944,0,12.1127469099328,9.70423769447427,7.0659005297872,3.95658863190582,4.57438218012048,3.12548022334056,9.49222196604695,4.50210088025344,7.48711414106369,4.41942878210502,5.97961059356232,4.47358669980721,1.13589289999776,0.529000920747499,0.289864488701678,0,0,0,0,0,2.38755514223978,0,0,0,1.26759077799012,0,0,0,1.29894624606728,0.760079596425296,3.0331466700887,1.02765491747154,12.6879562987114,1.7813056687779,2.60227990149204,2.13125834818499,2.7673859670727,2.56228488939458,3.76283862834255,0.628332956648377,10.3821886448437,2.60278842455841,4.42305275974937,1.29413479957927,1.54589062922275,2.90925151881133,9.31958806090611,21.6657789788545,9.21565509979202,3.57639877292028,8.2672435909085,4.79922184794726,4.82866862877646,9.58660092190865,5.03250663100489,2.63874139437015,4.86708096538374,2.04572365864264,10.5971902725376,4.2182728397617,1.32391173005411,1.11966273549084,0,2.52530227063769,2.60240885925407,2.5289231487682,2.88099407688559,2.71268672104287,1.90502197623718,2.562274405697,1.87403449119458,3.10444044886819,6.46703978798527,5.29497024469894,2.28736461413134,3.06874025398605,3.61461423993277,2.089512999133,0.411564272815887,1.99034266818493,3.51106593656617,2.83082697826187,5.11494298912067,3.93538967817454,4.92504725960302,4.32148947506436,2.60419209143731,2.75469924446365,2.1597395804233,3.72054311600653,1.87791380979733,1.86824547787471,3.62031669809657,3.2833492815819,2.1888578577381,2.19299981137998,4.17145219052996,2.54992195644706,3.15434922846191,3.2929475961371,5.61711931072457,5.81791246659797,2.98603550749328,5.10920678092965,4.51036114627327,6.25218926332362,5.55945109612176,7.22857379227725,6.16887780007865,3.95277491337626,4.52403375840485,6.96347652144028,6.23885078781184,3.59527763461689,4.75503709724327,4.77939055810481,2.65535061334314,2.85621281524322,2.25415471346161,1.4255592949172,2.13347735884388,1.82353131714828,1.45444035385792,1.47610147979602,1.09899109488962,0.987177311374404,0,3.83743743147016,4.71741588271687,4.49724224769707,1.82574109249653,2.17059443777175,0.763877555344259,1.72617682470486,1.45921704097532,0,0,2.23284568601102,0.624075346229121,0,0,0,2.40179147216586,2.4633883530163,3.7481944581666,2.03694102930226,3.98973422090454,1.17254380209271,1.6663054862021,1.56106918286239,0.157635144106191,0.221464689648775,0.956728611944923,2.29408640602033,1.72684981865896,2.02508682014116,0,2.17562273527484,1.47529281905711,1.10374698521893,9.31193421929193,9.25972324078405,2.78689407140348,0,0.94652465824877,2.34263246577983,1.07711698866399,2.86762557543062,1.11399337041197,0.566153061577665,1.21443210502468,0.292255857911312,1.58115111178609,11.2462460747632,5.81954349353901,0.712262414669021,1.79175655288934,8.41347627159931,0,3.8844901784797,0.906970670894253,3.39489143560617,3.83892460745005,1.53717573971964,3.6179961043551,5.45300594216258,2.85197902707777,3.47640433729398,2.10837217149998,0,2.7235168460303,2.88097750450096,2.45781499187234,1.92903331528433,3.01478397191865,2.67553226403106,2.96188237083818,1.2178597964584,30.7419937563461,57.8301553458229,13.0111754852428,0.16488625294148,0.322928853391811,0.663442174209714,0.238744688006273,0.656563598980245,7.57850175237612,11.6817940266621,4.61351378154202,2.27025554759545,3.88908507476395,3.20226376907975,2.7338845544205,3.43167259809784,11.728511669576,9.37674730568509,10.0885980877229,0.954670618015114,4.4287039101359,3.25311147402958,3.67218158794124,3.3454127362315,4.58561383866973,6.60835297285622,4.21532624199213,1.83229159388821,4.14767914533737,4.97071450469541,0,3.73791365109947,3.47462829959905,3.11121901350476,3.87479470433193,2.87225413334323,1.76035857968631,0.39061315453185,0.419437377702843,0.241584120826006,0,2.52808896502543,3.24360344464263,5.6491026440655,8.18501184760109,6.80301443536429,6.35780335300048,6.37035882455835,5.46451250545936,5.95702054694071,4.19137436602499,4.43635214602098,5.06780979846713,5.8689223400601,4.44132228289962,1.81384306892169,12.6531993423217,12.5599399253266,10.4088462145729,3.28422309854724,21.2081197259836,9.70703608616505,4.93047271881851,4.51414893631827,1.6942555278512,1.84130094602871,5.15605962095457,2.40594455281163,2.05524755931193,1.5107877947794,1.35004500046361,3.15224842256954,3.62513927187364,2.07104124700728,3.42498247027783,5.1873233542134,2.73173769206615,3.16038732188782,1.46729213839588,1.65459157605013,2.22246727801615,2.67845574410562,1.60459604795908,2.27427490587418,1.2673964994512,1.88626341386076,1.96647165686753,1.92075457214608,2.46972516509137,2.38146845641537,0.927074607558844,2.31491064556446,0.412085900803307,1.91358596174717,2.40008476669791,1.77475806159337,1.43061713968393,1.59881058295561,2.72917203204459,1.94613598150856,1.09756783723664,1.8414879800649,1.22223702461276,1.68342681497322,1.42362021749009,1.37906275325789,2.86461730218783,0.77468420592983,1.54325288784913,2.24829520144151,2.33931608445408,1.71896843238639,1.53030665655075,1.54413993383661,0.463735671240843
|short_description=p4@Slc38a1
}}
}}

Latest revision as of 11:37, 1 October 2015

Short description:p4@Slc38a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Slc38a1_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 32bp_to_ENSMUST00000088454, NM_001166456, uc007xki.2, uc007xkk.2, uc007xkl.2_5end
EntrezGene:Slc38a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Slc38a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.31
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7176.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2195.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E634.59
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F132.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.59
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H912.69
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A810.38
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.83
corpora quadrigemina, adult.CNhs10501.16-22A49.59
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E26.47
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F77.23
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C29.31
medulla oblongata, neonate N30.CNhs11200.1396-42A39.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I75.82
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G68.41
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I730.74
placenta, adult pregnant day17.CNhs10464.577-18G357.83
prostate, adult.CNhs10470.859-1F813.01
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C911.68
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F23.89
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.09
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B86.61
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I25.65
thymus, embryo E16.CNhs11002.456-26C58.19
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C75.46
thymus, neonate N06.CNhs11197.681-26C45.96
thymus, neonate N07.CNhs11211.713-19D34.19
thymus, neonate N10.CNhs11194.748-24E44.44
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G75.87
thymus, neonate N30.CNhs11132.1393-42G24.44
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.56
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.41
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F521.21
uterus, adult.CNhs10509.92-27E59.71
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I83.42
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell8.00e-0711
pro-T cell8.00e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:96472712..96472741,-&oldid=4301933"