FFCP PHASE1:Mm9::chr15:79664638..79664649,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:79664638..79664649,-
|short_description=p2@Npcd
|description=CAGE_peak_2_at_Npcd_5end
|association_with_transcript=0bp_to_ENSMUST00000089297_5end
|Entrez...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=504193 | |EntrezGene=504193 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q1P4 | |UniProt=E9Q1P4 | ||
|association_with_transcript=0bp_to_ENSMUST00000089297_5end | |||
|cluster_id=chr15:79664638..79664649,- | |||
|description=CAGE_peak_2_at_Npcd_5end | |||
|id=chr15:79664638..79664649,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.42e-17!73;UBERON:0005743!3.42e-17!73;UBERON:0000955!7.69e-16!50;UBERON:0006238!7.69e-16!50;UBERON:0000073!8.70e-16!75;UBERON:0001016!8.70e-16!75;UBERON:0001049!1.12e-15!52;UBERON:0005068!1.12e-15!52;UBERON:0006241!1.12e-15!52;UBERON:0007135!1.12e-15!52;UBERON:0002616!3.07e-15!49;UBERON:0000033!2.75e-14!63;UBERON:0002346!5.79e-14!71;UBERON:0003075!5.79e-14!71;UBERON:0007284!5.79e-14!71;UBERON:0004121!9.28e-13!102;UBERON:0000924!9.28e-13!102;UBERON:0006601!9.28e-13!102;UBERON:0003080!4.69e-12!40;UBERON:0002780!1.41e-11!39;UBERON:0001890!1.41e-11!39;UBERON:0006240!1.41e-11!39;UBERON:0003056!7.52e-11!49;UBERON:0000153!9.77e-11!94;UBERON:0004111!1.33e-10!122;UBERON:0007811!1.73e-10!86;UBERON:0000025!9.45e-10!114;UBERON:0002020!3.61e-09!34;UBERON:0002021!9.22e-08!10;UBERON:0000411!9.22e-08!10;UBERON:0001950!9.22e-08!10;UBERON:0002791!1.11e-07!29;UBERON:0003528!1.11e-07!29;UBERON:0001893!1.11e-07!29;UBERON:0000477!3.12e-07!154;UBERON:0000475!3.34e-07!200;UBERON:0000468!3.61e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.31e-17,73;UBERON:0000073,4.30e-17,54;UBERON:0001049,7.88e-16,52;UBERON:0005068,7.88e-16,52;UBERON:0006241,7.88e-16,52;UBERON:0007135,7.88e-16,52;UBERON:0001016,8.36e-16,75;UBERON:0000955,2.01e-14,47;UBERON:0006238,2.01e-14,47;UBERON:0002346,3.96e-14,64;UBERON:0003075,3.96e-14,64;UBERON:0007284,3.96e-14,64;UBERON:0002616,7.88e-14,46;UBERON:0010314,2.32e-13,92;UBERON:0003080,3.60e-12,40;UBERON:0004121,4.57e-12,95;UBERON:0000924,4.57e-12,95;UBERON:0006601,4.57e-12,95;UBERON:0002780,1.10e-11,39;UBERON:0001890,1.10e-11,39;UBERON:0006240,1.10e-11,39;UBERON:0010371,1.50e-11,73;UBERON:0003056,5.96e-11,49;UBERON:0004111,2.36e-10,122;UBERON:0000025,1.62e-09,114;UBERON:0002020,2.99e-09,34;UBERON:0002021,7.89e-08,10;UBERON:0000411,7.89e-08,10;UBERON:0001950,7.89e-08,10;UBERON:0003528,9.50e-08,29;UBERON:0002791,9.50e-08,29;UBERON:0001893,9.50e-08,29 | |||
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| ||
|short_description=p2@Npcd | |||
}} | }} |
Latest revision as of 03:14, 27 September 2015
Short description: | p2@Npcd |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Npcd_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000089297_5end |
EntrezGene: | Npcd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.31e-17 | 73 |
regional part of nervous system | 4.30e-17 | 54 |
neural tube | 7.88e-16 | 52 |
neural rod | 7.88e-16 | 52 |
future spinal cord | 7.88e-16 | 52 |
neural keel | 7.88e-16 | 52 |
nervous system | 8.36e-16 | 75 |
brain | 2.01e-14 | 47 |
future brain | 2.01e-14 | 47 |
neurectoderm | 3.96e-14 | 64 |
neural plate | 3.96e-14 | 64 |
presumptive neural plate | 3.96e-14 | 64 |
regional part of brain | 7.88e-14 | 46 |
structure with developmental contribution from neural crest | 2.32e-13 | 92 |
anterior neural tube | 3.60e-12 | 40 |
ectoderm-derived structure | 4.57e-12 | 95 |
ectoderm | 4.57e-12 | 95 |
presumptive ectoderm | 4.57e-12 | 95 |
regional part of forebrain | 1.10e-11 | 39 |
forebrain | 1.10e-11 | 39 |
future forebrain | 1.10e-11 | 39 |
ecto-epithelium | 1.50e-11 | 73 |
pre-chordal neural plate | 5.96e-11 | 49 |
anatomical conduit | 2.36e-10 | 122 |
tube | 1.62e-09 | 114 |
gray matter | 2.99e-09 | 34 |
occipital lobe | 7.89e-08 | 10 |
visual cortex | 7.89e-08 | 10 |
neocortex | 7.89e-08 | 10 |
brain grey matter | 9.50e-08 | 29 |
regional part of telencephalon | 9.50e-08 | 29 |
telencephalon | 9.50e-08 | 29 |