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FFCP PHASE1:Mm9::chr15:78004456..78004519,-: Difference between revisions

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(Created page with "{{FFCP |id=chr15:78004456..78004519,- |short_description=p1@Ift27 |description=CAGE_peak_1_at_Ift27_5end |association_with_transcript=18bp_to_ENSMUST00000016781,NM_025931,...")
 
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{{FFCP
{{FFCP
|id=chr15:78004456..78004519,-
|DHSsupport=NA
|short_description=p1@Ift27
|DPIdataset=NA
|description=CAGE_peak_1_at_Ift27_5end
|association_with_transcript=18bp_to_ENSMUST00000016781,NM_025931,uc007wor.1_5end
|EntrezGene=67042
|EntrezGene=67042
|HGNC=
|HGNC=
|MCL_coexpression_id=735
|TSSclassifier=NA
|UniProt=Q9D0P8
|UniProt=Q9D0P8
|association_with_transcript=18bp_to_ENSMUST00000016781,NM_025931,uc007wor.1_5end
|cluster_id=chr15:78004456..78004519,-
|description=CAGE_peak_1_at_Ift27_5end
|id=chr15:78004456..78004519,-
|ontology_enrichment_celltype=CL:0002319!1.06e-15!43;CL:0000221!2.16e-15!44;CL:0000133!2.16e-15!44;CL:0000540!2.69e-12!33;CL:0000047!2.69e-12!33;CL:0000031!2.69e-12!33;CL:0000404!2.69e-12!33;CL:0000117!2.22e-10!23;CL:0000337!2.22e-10!23;CL:0000055!3.38e-10!50;CL:0000393!7.81e-08!39;CL:0000211!7.81e-08!39
|ontology_enrichment_celltype_v019_2=CL:0002319,1.06e-15,43;CL:0000221,2.16e-15,44;CL:0000133,2.16e-15,44;CL:0000540,2.69e-12,33;CL:0000047,2.69e-12,33;CL:0000031,2.69e-12,33;CL:0000404,2.69e-12,33;CL:0000117,2.22e-10,23;CL:0000337,2.22e-10,23;CL:0000393,7.81e-08,39;CL:0000211,7.81e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-22,73;UBERON:0001016,3.95e-21,75;UBERON:0004121,8.57e-18,95;UBERON:0000924,8.57e-18,95;UBERON:0006601,8.57e-18,95;UBERON:0002346,1.08e-17,64;UBERON:0003075,1.08e-17,64;UBERON:0007284,1.08e-17,64;UBERON:0000073,2.83e-15,54;UBERON:0001049,3.94e-15,52;UBERON:0005068,3.94e-15,52;UBERON:0006241,3.94e-15,52;UBERON:0007135,3.94e-15,52;UBERON:0003056,5.94e-14,49;UBERON:0010371,9.37e-14,73;UBERON:0000955,4.77e-13,47;UBERON:0006238,4.77e-13,47;UBERON:0002616,8.00e-13,46;UBERON:0003080,3.56e-12,40;UBERON:0002780,3.97e-12,39;UBERON:0001890,3.97e-12,39;UBERON:0006240,3.97e-12,39;UBERON:0002020,6.85e-11,34;UBERON:0010314,1.63e-09,92;UBERON:0003528,8.92e-09,29;UBERON:0002791,8.92e-09,29;UBERON:0001893,8.92e-09,29
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4903,24.7332230481925,19.4452115293456,20.9628061196331,20.2296519577231,17.9357998923979,11.7790173892813,15.6834117683069,21.1255366449555,210.821159067887,28.8566933864879,29.9479867727347,34.8067627135845,24.6695262842466,27.8777607059784,20.4201595243612,19.6608621114365,15.7289016638566,87.6950358598402,99.6583821652215,33.1811676659587,39.1259665510017,41.2898047802606,37.6770386635606,41.7132200905232,34.9679184415026,27.7651488391128,35.5931760490731,31.9053981836147,40.4658143338049,35.2891647978942,34.0128003781736,30.8840011665458,28.0504565235765,18.8186218400625,16.8709324564289,15.6999249066582,15.6132693218593,19.8985281853156,17.6421526924111,18.8646172995283,15.4345232936927,25.5801773058035,27.1080884456192,36.365693684067,45.2587455617123,58.2582288145101,31.5137959094495,27.9495742034189,23.6257875081132,25.2179873805563,26.2822597210839,24.8524949640874,63.3102820263478,47.8829848081237,37.0491924486471,28.6865926140587,34.5861718336171,26.105778199902,16.8907513129228,19.1612603232172,19.5760717851007,19.2049880940486,25.0944506891337,21.8806556007848,25.1895655093984,18.631319349817,20.2747205413315,29.5302088595506,20.3956413662946,22.1845603533261,18.9559514369521,17.5166714959933,25.3723246765207,21.2970967391205,22.1745656651008,24.9995836607605,20.3276261697114,20.8151935413524,18.2927972872773,22.0978557607788,18.6051635968831,13.4674145197857,19.5747779904887,22.1635085345018,24.1446315470117,20.6065998777335,24.499139594605,38.7206395803816,21.9895711938684,21.0573632967332,17.7898148824024,18.0884963678003,20.1725016989767
|phase1_expression=29.1470901730725,0.348975407639361,2.72999543633722,1.81478526784098,0,4.19698179779725,3.73780224952841,9.94249590500137,1.40788722151667,1.87251621057595,2.73948749160808,1.99430397488341,14.7232627740837,13.2004807652686,44.6367080832988,30.5737653758637,46.1710839564577,24.4483178152634,15.219702130237,26.7365480632759,32.5715801278597,39.4185076267515,40.224767527396,5.59973479776923,6.65286915094793,1.14846392823004,3.4460959692726,3.878482188346,5.51067916423484,4.53654233567875,6.43018480900384,33.0215950199008,35.0586928923205,15.8481681015439,16.1756907060714,18.2858109894342,17.3543952823014,10.0447591376858,15.626706890476,7.85285615960697,5.88231488031014,2.04913645487534,6.79714494243615,13.7227531593379,12.9762471960979,10.4621648732158,92.3221786330686,86.3379619266568,52.0656253080698,78.3552493269362,53.0548537960124,66.1261796078869,15.268217151254,15.2326049822382,14.1159395639835,11.3194151855817,16.3324060765091,15.9858348606007,57.2555584232662,54.4860708650194,53.2418378945191,45.4051672972637,55.1362773588906,20.6976934974722,48.4544517657817,31.2611250576284,50.6324186776104,107.581125490035,57.6514244435136,63.4527910158946,78.0305606613627,49.9889222706656,49.695421714113,64.3076695878509,55.8779096036318,83.6489095815119,39.6417171597799,26.3035916455487,26.8811433198426,54.3371505448399,41.8098531263012,46.3612899795516,39.6439858581961,39.9561453122493,25.9757021220577,40.6587447953661,41.5725307933381,47.3454592396263,9.76867893998074,21.0844652697932,25.218210517046,6.0229671388697,4.75979933595425,10.7940638327563,9.74664626171504,4.03224198387602,12.3591089715942,10.0553890321054,13.2490862347463,12.3668851078619,23.0983208433756,8.98285341900225,7.64415719119937,21.3320010945999,19.9171757730317,20.7755089689581,17.6933555755174,10.6191008138726,20.7150306917737,17.5161724096493,32.4417561052674,28.010824004717,27.443244173471,21.1011696773672,21.4011446986983,19.729654838759,7.41584903203122,13.013942122792,25.6537060065464,21.8385247429002,26.5009822152472,25.6983884161668,24.2309289583559,24.3008061519584,25.5524982312415,12.7728527604296,28.515999632409,34.1944556666242,21.0936576941287,30.5572904385838,27.9075367719362,64.2093739296737,29.3763101124947,22.2472447877388,31.7915708176127,27.2565321953833,28.4131825142382,20.9003710624956,24.0086620511991,13.0473950649614,50.7469727554545,40.2328682758578,47.8965265282229,38.4297285481073,45.3803449339357,48.2988725473884,44.0398105430725,20.6962696591213,65.9638058374497,37.632109953396,33.9585669636421,37.0440787802601,30.3071501655902,18.4573648256748,19.9608672315705,33.4377568255069,25.9818879305897,32.4258362964541,30.689657934724,22.5767092063697,32.3645962773913,18.3663302690235,19.8865577891577,17.3152523937715,25.7626078521922,17.9051137457814,16.901224288176,15.6465558772007,17.9370236405694,17.237583728305,17.2676564332673,16.5205985790626,17.7835593385751,15.7021509949635,24.814213930567,51.7610200267801,3.30418782983798,8.19796756656987,46.496838616681,32.7453707323218,24.4848176511977,20.9750865608276,16.0112191568307,19.5932394895936,12.3377556001573,11.5289268306808,11.3100843960121,12.9321706826748,14.2323783596958,10.7858329038507,13.6166971421057,5.97423819763102,68.2804443431094,32.7893231189922,45.0830942692322,32.9915151109409,32.1961128698259,22.9344131041342,24.3460667928391,20.6654207171443,21.6658244421097,19.2499575718009,5.63259991465583,36.0385428346763,35.3806191203765,37.7768348806554,35.500521242988,25.3236017740038,23.1709525121092,24.4541716833189,20.7533090272045,24.7105271869273,12.9391385874619,17.8627654880882,12.4815069245824,10.6083128737787,8.07288360848605,5.78932225636041,32.3318082791558,31.26608294213,40.0893842047384,33.2700368119369,33.5607055052558,24.1209010716215,28.0891496245496,18.3425628986331,26.1674339216277,23.9181864820677,23.1209414553356,20.646777654183,16.9231282228578,21.1187625529007,12.0633027151418,15.7732648307426,12.7858710984949,8.27810238914197,27.1330497079368,23.7939723782172,13.9344703570174,11.1087207969924,32.8128548192907,31.6255382880277,37.6990946032398,35.3673820969777,32.5286064160295,42.4614796183249,48.5772842009873,42.3770993971402,29.2512955680427,35.024023489977,27.8202567008207,43.0918760874758,30.9485222771795,37.6131880377381,29.2039304347918,47.0994434140664,41.7206508611356,33.383099116794,35.4362271456927,20.9055900601871,12.9214146584111,23.2661586865604,20.6768479463138,27.495197940416,21.0837217149998,21.6584640821192,37.4483566329167,45.3753956958902,62.4802442670704,42.8674070063185,41.3202744386497,42.986885042099,45.9091767479918,53.5858310441695,12.4376005273766,12.4980921809654,21.1707262132763,18.6321465823872,19.6986600569005,19.9635781512196,17.6671069124642,17.7272171724666,13.9910801582328,30.5951748317341,35.7120140867512,33.2282857420788,27.7791791054568,44.4549558531071,48.663145068685,30.656275209674,20.3974115992626,18.8934460636938,17.8277966207707,17.184071124272,48.8739110082854,26.4315307264903,24.7332230481925,19.4452115293456,20.9628061196331,20.2296519577231,17.9357998923979,11.7790173892813,15.6834117683069,21.1255366449555,210.821159067887,28.8566933864879,29.9479867727347,34.8067627135845,24.6695262842466,27.8777607059784,20.4201595243612,19.6608621114365,15.7289016638566,87.6950358598402,99.6583821652215,33.1811676659587,39.1259665510017,41.2898047802606,37.6770386635606,41.7132200905232,34.9679184415026,27.7651488391128,35.5931760490731,31.9053981836147,40.4658143338049,35.2891647978942,34.0128003781736,30.8840011665458,28.0504565235765,18.8186218400625,16.8709324564289,15.6999249066582,15.6132693218593,19.8985281853156,17.6421526924111,18.8646172995283,15.4345232936927,25.5801773058035,27.1080884456192,36.365693684067,45.2587455617123,58.2582288145101,31.5137959094495,27.9495742034189,23.6257875081132,25.2179873805563,26.2822597210839,24.8524949640874,63.3102820263478,47.8829848081237,37.0491924486471,28.6865926140587,34.5861718336171,26.105778199902,16.8907513129228,19.1612603232172,19.5760717851007,19.2049880940486,25.0944506891337,21.8806556007848,25.1895655093984,18.631319349817,20.2747205413315,29.5302088595506,20.3956413662946,22.1845603533261,18.9559514369521,17.5166714959933,25.3723246765207,21.2970967391205,22.1745656651008,24.9995836607605,20.3276261697114,20.8151935413524,18.2927972872773,22.0978557607788,18.6051635968831,13.4674145197857,19.5747779904887,22.1635085345018,24.1446315470117,20.6065998777335,24.499139594605,38.7206395803816,21.9895711938684,21.0573632967332,17.7898148824024,18.0884963678003,20.1725016989767
|short_description=p1@Ift27
}}
}}

Latest revision as of 01:46, 27 September 2015

Short description:p1@Ift27
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ift27_5end
Coexpression cluster:MCL_coexpression_mm9:735
Association with transcript: 18bp_to_ENSMUST00000016781, NM_025931, uc007wor.1_5end
EntrezGene:Ift27
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ift27

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.15
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.72
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A144.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.57
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A546.17
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.22
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.74
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A332.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H239.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I940.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B95.51
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I333.02
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G635.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F618.29
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.98
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.46
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B792.32
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C286.34
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B852.07
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C378.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C453.05
Mouse Astrocytes, donor3.CNhs12107.11633-122C466.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.23
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.99
Mouse Granule cells, donor1.CNhs12131.11713-123C357.26
Mouse Granule cells, donor2.CNhs12357.11731-123E354.49
Mouse Granule cells, donor3.CNhs12108.11636-122C753.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C645.41
Mouse Meningeal cells, donor3.CNhs12109.11639-122D155.14
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C720.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E748.45
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D231.26
Mouse Microglia, donor1.CNhs12629.11718-123C850.63
Mouse Microglia, donor2.CNhs12634.11736-123E8107.58
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D557.65
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F563.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D978.03
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F149.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D549.70
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D264.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F255.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D683.65
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.88
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D454.34
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F441.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D846.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E439.64
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.98
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F641.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E147.35
Mouse Schwann, donor1.CNhs12507.11728-123D99.77
Mouse Schwann, donor2.CNhs12573.11746-123F921.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G325.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G220.78
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.69
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.62
accessory axillary lymph node, adult.CNhs10475.1063-29H920.72
adrenal gland, adult.CNhs10508.49-24D717.52
adrenal gland, embryo E14.CNhs11038.406-44C532.44
adrenal gland, embryo E16.CNhs11004.1254-43D628.01
adrenal gland, embryo E17.CNhs11043.1263-45I127.44
adrenal gland, embryo E18.CNhs11026.1262-18F521.10
adrenal gland, neonate N00.CNhs11191.1311-23C121.40
adrenal gland, neonate N25.CNhs11223.1377-27I319.73
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H113.01
bone (os femoris), adult.CNhs10483.56-12G225.65
bone (os femoris), neonate N02.CNhs11227.1985-43F521.84
bone (os femoris), neonate N16.CNhs11225.1525-43A626.50
bone (os femoris), neonate N20.CNhs11195.1350-25C325.70
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B224.30
cerebellum, neonate N30.CNhs11135.1395-42I225.55
colon, adult.CNhs10468.36-18H712.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D134.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D421.09
corpora quadrigemina, adult.CNhs10501.16-22A430.56
corpus striatum, adult.CNhs10487.19-21D827.91
corpus striatum, neonate N00.CNhs11226.630-43F164.21
cortex, adult.CNhs10473.12-14D529.38
cortex, neonate N30.CNhs11107.1392-42F222.25
diencephalon, adult.CNhs10482.20-12F231.79
diencephalon, neonate N30.CNhs11201.1388-42B227.26
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B128.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.90
epididymis, adult.CNhs10490.58-23B224.01
eyeball, adult.CNhs10484.31-12G413.05
eyeball, embryo E12.CNhs11016.345-16C650.75
eyeball, embryo E14.CNhs10521.399-16E240.23
eyeball, embryo E15.CNhs10593.426-16C947.90
eyeball, embryo E17.CNhs11023.1261-18D438.43
eyeball, neonate N00.CNhs11207.633-15C645.38
eyeball, neonate N01.CNhs11140.1532-43E748.30
eyeball, neonate N02.CNhs11205.1551-44G844.04
eyeball, neonate N16.CNhs11188.777-19A220.70
forelimb, embryo E11.CNhs10596.335-25E265.96
forelimb, embryo E12.CNhs10600.359-14H237.63
forelimb, embryo E13.CNhs10589.384-1E233.96
forelimb, embryo E14.CNhs10577.413-26A837.04
forelimb, embryo E15.CNhs11007.437-20E730.31
forelimb, embryo E17.CNhs10598.1517-43C418.46
forelimb, embryo E18.CNhs11008.1520-43B519.96
gonad, embryo E13.CNhs11044.1564-45I633.44
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.98
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D232.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D530.69
heart, embryo E11.CNhs10586.331-24E922.58
heart, embryo E12.CNhs11015.353-12F532.36
heart, embryo E13.CNhs11013.376-3I918.37
heart, embryo E14.CNhs10597.403-26D419.89
heart, embryo E15.CNhs11017.431-16C817.32
heart, embryo E16.CNhs11021.457-17C625.76
heart, embryo E17.CNhs11025.479-18E517.91
heart, embryo E18.CNhs11030.1283-20G316.90
heart, neonate N00.CNhs11213.639-21E315.65
heart, neonate N03.CNhs11221.1349-25I217.94
heart, neonate N10.CNhs11118.749-24G117.24
heart, neonate N16.CNhs11209.782-15G117.27
heart, neonate N20.CNhs11127.821-26I616.52
heart, neonate N25.CNhs11196.1351-25D317.78
heart, neonate N30.CNhs11202.1390-42D215.70
hippocampus, adult.CNhs10478.13-16E824.81
hippocampus, neonate N00.CNhs11228.627-43G151.76
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A38.20
intestine, embryo E12.CNhs11019.1251-16I546.50
intestine, embryo E13.CNhs11010.381-16D532.75
intestine, embryo E15.CNhs10602.976-16D824.48
intestine, embryo E16.CNhs10585.463-22H420.98
intestine, embryo E17.CNhs10582.482-18D316.01
intestine, embryo E18.CNhs10526.1289-20F719.59
intestine, neonate N00.CNhs11126.644-26D112.34
intestine, neonate N01.CNhs11192.1322-23E911.53
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F212.93
intestine, neonate N10.CNhs11098.755-23A514.23
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E313.62
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I968.28
kidney, embryo E15.CNhs10997.434-16F832.79
kidney, embryo E16.CNhs10584.464-22A545.08
kidney, embryo E17.CNhs11028.483-18I232.99
kidney, embryo E18.CNhs11001.1288-20C732.20
kidney, neonate N00.CNhs11214.646-21G722.93
kidney, neonate N10.CNhs11206.758-6D524.35
kidney, neonate N20.CNhs11113.832-19I120.67
kidney, neonate N25.CNhs11122.1353-25F321.67
kidney, neonate N30.CNhs11203.1385-42H119.25
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F836.04
liver, embryo E13.CNhs10524.378-3H635.38
liver, embryo E14.CNhs10594.409-16E137.78
liver, embryo E15.CNhs10520.433-16D735.50
liver, embryo E16.CNhs10523.462-17F525.32
liver, embryo E17.CNhs10510.481-18A323.17
liver, embryo E18.CNhs10579.499-43G424.45
liver, neonate N00.CNhs11117.641-24F420.75
liver, neonate N03.CNhs11123.1345-25G224.71
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H217.86
liver, neonate N10.CNhs11115.751-24B912.48
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H18.07
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B132.33
lung, embryo E12.CNhs10522.354-16G231.27
lung, embryo E14.CNhs10604.404-26F840.09
lung, embryo E15.CNhs11020.432-17C533.27
lung, embryo E16.CNhs10998.458-17B633.56
lung, embryo E17.CNhs10605.480-44A624.12
lung, embryo E18.CNhs10583.1287-20I628.09
lung, neonate N00.CNhs11224.640-42C618.34
lung, neonate N06.CNhs11212.683-20E526.17
lung, neonate N07.CNhs11111.715-19A323.92
lung, neonate N10.CNhs11219.750-23E623.12
lung, neonate N20.CNhs11109.822-18A420.65
lung, neonate N25.CNhs11119.1359-25C716.92
lung, neonate N30.CNhs11133.1394-42H221.12
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.77
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H28.28
medulla oblongata, adult.CNhs10477.17-12C227.13
medulla oblongata, neonate N30.CNhs11200.1396-42A323.79
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.11
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.81
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E231.63
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E337.70
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D735.37
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D832.53
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D942.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D448.58
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D542.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D629.25
olfactory brain, adult.CNhs10489.18-22I935.02
ovary, adult.CNhs10507.91-2I727.82
ovary, embryo E18.CNhs11040.505-44H743.09
ovary, neonate N00.CNhs11217.1299-22I430.95
oviduct, adult pregnant day01.CNhs10500.988-6G637.61
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F447.10
pancreas, embryo E15.CNhs11042.1556-45F241.72
pancreas, embryo E16.CNhs11003.460-26E533.38
pancreas, embryo E17.CNhs10599.1558-45G335.44
pancreas, embryo E18.CNhs10580.1535-43I720.91
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D723.27
pancreas, neonate N02.CNhs11139.1539-43D820.68
pancreas, neonate N16.CNhs11136.787-43B627.50
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G837.45
pituitary gland, embryo E12.CNhs11018.346-16E645.38
pituitary gland, embryo E13.CNhs11009.370-44C762.48
pituitary gland, embryo E14.CNhs11037.398-44A542.87
pituitary gland, embryo E15.CNhs10592.427-16B941.32
pituitary gland, embryo E16.CNhs11036.449-43F642.99
pituitary gland, embryo E17.CNhs11039.1265-44F545.91
pituitary gland, neonate N00.CNhs11190.1308-22E953.59
placenta, adult pregnant day10.CNhs10472.539-13I712.44
placenta, adult pregnant day17.CNhs10464.577-18G312.50
prostate, adult.CNhs10470.859-1F821.17
skin, adult.CNhs10492.30-1C318.63
skin, neonate N00.CNhs11124.650-25G419.70
skin, neonate N03.CNhs11215.662-22H319.96
skin, neonate N06.CNhs11097.693-20I517.67
skin, neonate N10.CNhs11108.762-6C417.73
small intestine, neonate N16.CNhs11114.790-21I113.99
spinal cord, adult.CNhs10505.24-13C930.60
spleen, adult.CNhs10465.25-2G235.71
spleen, embryo E16.CNhs11035.461-43C133.23
spleen, embryo E18.CNhs11011.1271-21F227.78
spleen, neonate N10.CNhs11116.752-24D144.45
spleen, neonate N20.CNhs11112.824-19H148.66
spleen, neonate N25.CNhs11099.1354-25G330.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C620.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.83
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E348.87
stomach, embryo E15.CNhs10603.1252-16G826.43
stomach, embryo E16.CNhs11022.459-17D424.73
stomach, embryo E17.CNhs11006.1035-18D519.45
stomach, embryo E18.CNhs10999.1286-20C620.96
stomach, neonate N03.CNhs11193.1340-24B820.23
stomach, neonate N07.CNhs11210.718-18A917.94
stomach, neonate N25.CNhs11104.1355-25E411.78
stomach, neonate N30.CNhs11134.1386-42I115.68
submandibular gland, adult.CNhs10469.59-29C121.13
testis, adult.CNhs10504.57-7G5210.82
testis, embryo E13.CNhs11031.389-23F528.86
testis, embryo E15.CNhs11034.443-27C529.95
testis, embryo E16.CNhs11033.470-26G534.81
testis, embryo E17.CNhs11029.486-18I524.67
testis, embryo E18.CNhs11027.503-18G527.88
testis, neonate N00.CNhs11189.1300-22B720.42
testis, neonate N07.CNhs11222.726-26I419.66
testis, neonate N10.CNhs11204.763-44D915.73
testis, neonate N20.CNhs11110.839-18H387.70
testis, neonate N30.CNhs11130.1391-42E299.66
thymus, adult.CNhs10471.38-12B533.18
thymus, embryo E14.CNhs11041.402-44I439.13
thymus, embryo E15.CNhs11005.430-45I241.29
thymus, embryo E16.CNhs11002.456-26C537.68
thymus, embryo E17.CNhs10581.478-18C141.71
thymus, embryo E18.CNhs10595.1273-19G434.97
thymus, neonate N02.CNhs11181.1541-43F827.77
thymus, neonate N03.CNhs11137.2104-43C735.59
thymus, neonate N06.CNhs11197.681-26C431.91
thymus, neonate N07.CNhs11211.713-19D340.47
thymus, neonate N10.CNhs11194.748-24E435.29
thymus, neonate N20.CNhs11186.820-7A234.01
thymus, neonate N25.CNhs11125.1362-25G730.88
thymus, neonate N30.CNhs11132.1393-42G228.05
tongue, adult.CNhs10499.32-1B418.82
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F715.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.61
urinary bladder, adult.CNhs10481.879-12E419.90
uterus, adult pregnant day19.CNhs10497.590-15F517.64
uterus, adult.CNhs10509.92-27E518.86
vagina, adult.CNhs10502.89-27D515.43
vesicular gland, adult.CNhs10491.51-27F825.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A236.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A345.26
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D758.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A431.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.95
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A623.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I863.31
whole body, embryo E12.CNhs10587.857-27C947.88
whole body, embryo E13.CNhs10512.372-23H237.05
whole body, embryo E14.5.CNhs10578.420-27D228.69
whole body, embryo E14.CNhs10519.395-14B134.59
whole body, embryo E16.CNhs10514.453-14F226.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G525.09
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G521.88
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G525.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.18
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.52
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.61
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.61
whole body, embryo E17.5.CNhs10513.490-9F924.50
whole body, embryo E17.CNhs10517.475-3I538.72
whole body, embryo E18.CNhs10516.493-3B321.99
whole body, neonate N00.CNhs10525.657-19C221.06
whole body, neonate N01.CNhs10576.659-23C617.79
whole body, neonate N06.CNhs10515.692-21D118.09
whole body, neonate N10.CNhs10518.761-6B420.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.06e-1543
ectodermal cell2.16e-1544
neurectodermal cell2.16e-1544
neuron2.69e-1233
neuronal stem cell2.69e-1233
neuroblast2.69e-1233
electrically signaling cell2.69e-1233
CNS neuron (sensu Vertebrata)2.22e-1023
neuroblast (sensu Vertebrata)2.22e-1023
electrically responsive cell7.81e-0839
electrically active cell7.81e-0839

Uber anatomy
Ontology termp-valuen
central nervous system1.96e-2273
nervous system3.95e-2175
ectoderm-derived structure8.57e-1895
ectoderm8.57e-1895
presumptive ectoderm8.57e-1895
neurectoderm1.08e-1764
neural plate1.08e-1764
presumptive neural plate1.08e-1764
regional part of nervous system2.83e-1554
neural tube3.94e-1552
neural rod3.94e-1552
future spinal cord3.94e-1552
neural keel3.94e-1552
pre-chordal neural plate5.94e-1449
ecto-epithelium9.37e-1473
brain4.77e-1347
future brain4.77e-1347
regional part of brain8.00e-1346
anterior neural tube3.56e-1240
regional part of forebrain3.97e-1239
forebrain3.97e-1239
future forebrain3.97e-1239
gray matter6.85e-1134
structure with developmental contribution from neural crest1.63e-0992
brain grey matter8.92e-0929
regional part of telencephalon8.92e-0929
telencephalon8.92e-0929
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