UBERON:0009722: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=entire pharyngeal arch endoderm | |name=entire pharyngeal arch endoderm | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0003929;;UBERON:0008814 | |part_of=UBERON:0003929;;UBERON:0008814 | ||
Latest revision as of 18:06, 12 September 2014
| Name: | entire pharyngeal arch endoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: | "pharyngeal arch endoderm" RELATED [EHDAA2:0004621] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004814(upper respiratory tract epithelium),UBERON:0005291(embryonic tissue),UBERON:0015833(foregut epithelium) |
|---|---|
| develops_from: | UBERON:0000925(endoderm) |
| part_of: | UBERON:0003929(gut epithelium),UBERON:0008814(pharyngeal arch system) |
Children
| part of: | UBERON:0007690 (early pharyngeal endoderm) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009722 (entire pharyngeal arch endoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.76e-68 | FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_ce71b0fa87b955ed9a8c3d5b2ba0537c | p4@uc009bpa.1 |
| 1.76e-68 | FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_ce71b0fa87b955ed9a8c3d5b2ba0537c | p4@uc009bpa.1 |
| 2.4e-67 | FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_75488f81e68740b01dba32f5b06e074c | p8@uc009bpa.1 |
| 2.4e-67 | FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_75488f81e68740b01dba32f5b06e074c | p8@uc009bpa.1 |
| 1.12e-65 | FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_5af33e79e00d67a6430d6a04ed3b64b9 | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 1.12e-65 | FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_5af33e79e00d67a6430d6a04ed3b64b9 | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 2.12e-64 | FFCP PHASE1:Mm9::chr6:41491752..41491776,-#_8483a3905d30fe2bb8ae7f36af946d77 | p@chr6:41491752..41491776, - |
| 2.12e-64 | FFCP PHASE2:Mm9::chr12:108361918..108361930,-#_8483a3905d30fe2bb8ae7f36af946d77 | p@chr12:108361918..108361930, - |
| 2.12e-64 | FFCP PHASE2:Mm9::chr6:41491752..41491776,-#_8483a3905d30fe2bb8ae7f36af946d77 | p@chr6:41491752..41491776, - |
| 2.12e-64 | FFCP PHASE1:Mm9::chr12:108361918..108361930,-#_8483a3905d30fe2bb8ae7f36af946d77 | p@chr12:108361918..108361930, - |
| 3.88e-63 | FFCP PHASE1:Mm9::chr6:41483173..41483188,+#_dc8b2eb0d065e28ce91c9e6867ae3433 | p2@ENSMUST00000103283 |
| 3.88e-63 | FFCP PHASE2:Mm9::chr6:41483173..41483188,+#_dc8b2eb0d065e28ce91c9e6867ae3433 | p2@ENSMUST00000103283 |
| 4.88e-63 | FFCP PHASE1:Mm9::chr6:41484803..41484826,+#_370ab862b14b56bc8e2096a41247bc6e | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 4.88e-63 | FFCP PHASE2:Mm9::chr6:41484803..41484826,+#_370ab862b14b56bc8e2096a41247bc6e | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 7.68e-62 | FFCP PHASE1:Mm9::chr9:44807434..44807445,-#_5cfc9c5ba5b566647f0c88dea29505e0 | p@chr9:44807434..44807445, - |
| 7.68e-62 | FFCP PHASE2:Mm9::chr9:44807434..44807445,-#_5cfc9c5ba5b566647f0c88dea29505e0 | p@chr9:44807434..44807445, - |
| 1.0e-61 | FFCP PHASE2:Mm9::chr6:41494001..41494028,+#_fe8fa712e39a209dc0d0609ca1fe9ecc | p@chr6:41494001..41494028, + |
| 1.0e-61 | FFCP PHASE1:Mm9::chr6:41494001..41494028,+#_fe8fa712e39a209dc0d0609ca1fe9ecc | p@chr6:41494001..41494028, + |
| 2.4e-61 | FFCP PHASE2:Mm9::chr9:44809185..44809215,-#_d47eba54fcc9386edb171139b752e29c | p@chr9:44809185..44809215, - |
| 2.4e-61 | FFCP PHASE1:Mm9::chr9:44809185..44809215,-#_d47eba54fcc9386edb171139b752e29c | p@chr9:44809185..44809215, - |
| 2.59e-61 | FFCP PHASE2:Mm9::chr2:11093788..11093799,+#_dafe74501d63272d4ad580e0367f0700 | p11@Prkcq |
| 2.59e-61 | FFCP PHASE1:Mm9::chr2:11093788..11093799,+#_dafe74501d63272d4ad580e0367f0700 | p11@Prkcq |
| 8.25e-61 | FFCP PHASE2:Mm9::chr14:54791784..54791787,+#_11c9d9c88db60a32f47827f378917d7f | p@chr14:54791784..54791787, + |
| 8.25e-61 | FFCP PHASE1:Mm9::chr14:54791784..54791787,+#_11c9d9c88db60a32f47827f378917d7f | p@chr14:54791784..54791787, + |
| 1.47e-60 | FFCP PHASE1:Mm9::chr6:40997465..40997489,+#_44825c29cb0239a5deaaed5a86a46216 | p1@ENSMUST00000103263 |
| 1.47e-60 | FFCP PHASE2:Mm9::chr6:40997465..40997489,+#_44825c29cb0239a5deaaed5a86a46216 | p1@ENSMUST00000103263 |
| 2.74e-60 | FFCP PHASE1:Mm9::chr10:28388454..28388458,+#_47f85880a74f630881b911dc427a92cb | p5@Themis |
| 2.74e-60 | FFCP PHASE2:Mm9::chr10:28388454..28388458,+#_47f85880a74f630881b911dc427a92cb | p5@Themis |
| 3.21e-60 | FFCP PHASE2:Mm9::chr6:41482920..41482933,+#_fb32db84704308fc00f6854037fead34 | p5@uc009bpa.1 |
| 3.21e-60 | FFCP PHASE1:Mm9::chr6:41482920..41482933,+#_fb32db84704308fc00f6854037fead34 | p5@uc009bpa.1 |
| 3.77e-60 | FFCP PHASE2:Mm9::chr9:44793518..44793537,+#_71187d34abe252dd5dd35dc8fad03470 | p@chr9:44793518..44793537, + |
| 3.77e-60 | FFCP PHASE1:Mm9::chr9:44793518..44793537,+#_71187d34abe252dd5dd35dc8fad03470 | p@chr9:44793518..44793537, + |
| 4.87e-60 | FFCP PHASE2:Mm9::chr6:41071548..41071565,+#_2e4f7771a92ee69b2d8d0adfc9cdd3a9 | p@chr6:41071548..41071565, + |
| 4.87e-60 | FFCP PHASE1:Mm9::chr6:41071548..41071565,+#_2e4f7771a92ee69b2d8d0adfc9cdd3a9 | p@chr6:41071548..41071565, + |
| 9.63e-60 | FFCP PHASE1:Mm9::chr6:40997323..40997349,+#_9e0c398b49247b975dd7f7d8ea568191 | p2@uc009bnp.1, p2@uc012eki.1 |
| 9.63e-60 | FFCP PHASE2:Mm9::chr6:40997323..40997349,+#_9e0c398b49247b975dd7f7d8ea568191 | p2@uc009bnp.1, p2@uc012eki.1 |
| 5.49e-59 | FFCP PHASE1:Mm9::chr11:52095797..52095809,-#_dd37798c2f5295288c2e6dc7ced72edf | p5@Tcf7 |
| 5.49e-59 | FFCP PHASE2:Mm9::chr11:52095797..52095809,-#_dd37798c2f5295288c2e6dc7ced72edf | p5@Tcf7 |
| 2.14e-58 | FFCP PHASE2:Mm9::chr14:61328148..61328173,+#_0fdb8f42db2d67152bf76a9c4def5458 | p@chr14:61328148..61328173, + |
| 2.14e-58 | FFCP PHASE1:Mm9::chr14:61328148..61328173,+#_0fdb8f42db2d67152bf76a9c4def5458 | p@chr14:61328148..61328173, + |
| 3.25e-58 | FFCP PHASE1:Mm9::chr6:41483016..41483036,+#_234811600a12b57946c5c70458218612 | p2@uc009bpa.1 |
| 3.25e-58 | FFCP PHASE2:Mm9::chr6:41483016..41483036,+#_234811600a12b57946c5c70458218612 | p2@uc009bpa.1 |
| 3.74e-58 | FFCP PHASE2:Mm9::chrX:39855684..39855699,+#_2801ae4cbd1ec7661fc4adb1939b0788 | p2@Sh2d1a |
| 3.74e-58 | FFCP PHASE1:Mm9::chrX:39855684..39855699,+#_2801ae4cbd1ec7661fc4adb1939b0788 | p2@Sh2d1a |
| 7.15e-58 | FFCP PHASE1:Mm9::chr6:41128981..41128995,+#_043f58669ec47be1f409269afd99ad39 | p1@uc012ekr.1 |
| 7.15e-58 | FFCP PHASE2:Mm9::chr6:41128981..41128995,+#_043f58669ec47be1f409269afd99ad39 | p1@uc012ekr.1 |
| 9.05e-58 | FFCP PHASE2:Mm9::chr6:40841675..40841691,+#_5d01038be7b87390b65695019a562b0b | p2@1810009J06Rik |
| 9.05e-58 | FFCP PHASE1:Mm9::chr6:40841675..40841691,+#_5d01038be7b87390b65695019a562b0b | p2@1810009J06Rik |
| 1.34e-57 | FFCP PHASE2:Mm9::chr6:41066036..41066054,+#_2133e3deb3a7ef049ec6767a72ff0d43 | p1@uc012ekk.1 |
| 1.34e-57 | FFCP PHASE1:Mm9::chr6:41066036..41066054,+#_2133e3deb3a7ef049ec6767a72ff0d43 | p1@uc012ekk.1 |
| 1.56e-57 | FFCP PHASE2:Mm9::chr6:41491943..41491953,+#_f68c315525833481f30681a46338990b | p3@uc009bpo.1, p3@uc009bpp.1 |
| 1.56e-57 | FFCP PHASE1:Mm9::chr6:41491943..41491953,+#_f68c315525833481f30681a46338990b | p3@uc009bpo.1, p3@uc009bpp.1 |
| 1.56e-57 | FFCP PHASE2:Mm9::chr6:41009432..41009454,+#_f68c315525833481f30681a46338990b | p1@ENSMUST00000103265 |
| 1.56e-57 | FFCP PHASE1:Mm9::chr6:41009432..41009454,+#_f68c315525833481f30681a46338990b | p1@ENSMUST00000103265 |
| 3.61e-57 | FFCP PHASE1:Mm9::chr7:133512043..133512060,-#_3827f84bc3a9420b082bce839e0a694b | p@chr7:133512043..133512060, - |
| 3.61e-57 | FFCP PHASE2:Mm9::chr7:133512043..133512060,-#_3827f84bc3a9420b082bce839e0a694b | p@chr7:133512043..133512060, - |
| 4.31e-57 | FFCP PHASE2:Mm9::chr6:41128837..41128859,+#_d7389c8031beefa06a88507fe7bef19f | p2@Gm5409 |
| 4.31e-57 | FFCP PHASE1:Mm9::chr6:41128837..41128859,+#_d7389c8031beefa06a88507fe7bef19f | p2@Gm5409 |
| 6.91e-57 | FFCP PHASE1:Mm9::chr16:48772215..48772256,-#_39a4bf838b5d58aec6e3fba8a4d60e37 | p4@Trat1 |
| 6.91e-57 | FFCP PHASE2:Mm9::chr16:48772215..48772256,-#_39a4bf838b5d58aec6e3fba8a4d60e37 | p4@Trat1 |
| 6.93e-57 | FFCP PHASE1:Mm9::chr16:48772258..48772270,-#_7f384b1f5daa97faebdcc79826973f17 | p5@Trat1 |
| 6.93e-57 | FFCP PHASE2:Mm9::chr16:48772258..48772270,-#_7f384b1f5daa97faebdcc79826973f17 | p5@Trat1 |
| 7.43e-57 | FFCP PHASE1:Mm9::chr6:41489240..41489252,+#_81cbd6b334488bf8a80c9b8db7ca031e | p@chr6:41489240..41489252, + |
| 7.43e-57 | FFCP PHASE2:Mm9::chr6:41489240..41489252,+#_81cbd6b334488bf8a80c9b8db7ca031e | p@chr6:41489240..41489252, + |
| 1.27e-56 | FFCP PHASE1:Mm9::chr6:41484314..41484337,+#_3a86d1f418c730619c824ef41e00af13 | p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1 |
| 1.27e-56 | FFCP PHASE2:Mm9::chr6:41484314..41484337,+#_3a86d1f418c730619c824ef41e00af13 | p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1 |
| 1.56e-56 | FFCP PHASE1:Mm9::chr6:41494376..41494389,-#_57af18264385cbb9f44c6dc5625694fa | p@chr6:41494376..41494389, - |
| 1.56e-56 | FFCP PHASE2:Mm9::chr6:41231266..41231303,+#_57af18264385cbb9f44c6dc5625694fa | p1@ENSMUST00000103282 |
| 1.56e-56 | FFCP PHASE2:Mm9::chr6:41494376..41494389,-#_57af18264385cbb9f44c6dc5625694fa | p@chr6:41494376..41494389, - |
| 1.56e-56 | FFCP PHASE1:Mm9::chr6:41231266..41231303,+#_57af18264385cbb9f44c6dc5625694fa | p1@ENSMUST00000103282 |
| 1.67e-56 | FFCP PHASE1:Mm9::chr6:41493801..41493826,+#_db01eb1ae74c026fcd27136887960dc3 | p1@ENSMUST00000103298, p1@uc009bpy.1 |
| 1.67e-56 | FFCP PHASE2:Mm9::chr6:41493801..41493826,+#_db01eb1ae74c026fcd27136887960dc3 | p1@ENSMUST00000103298, p1@uc009bpy.1 |
| 1.92e-56 | FFCP PHASE2:Mm9::chr6:41492643..41492662,+#_bbe0c53bde1c2dba6ded151191cd8ff6 | p@chr6:41492643..41492662, + |
| 1.92e-56 | FFCP PHASE1:Mm9::chr6:41492643..41492662,+#_bbe0c53bde1c2dba6ded151191cd8ff6 | p@chr6:41492643..41492662, + |
| 2.05e-56 | FFCP PHASE1:Mm9::chr14:54794540..54794554,+#_335ef7ec06c914a9b56f64e919f0e99f | p@chr14:54794540..54794554, + |
| 2.05e-56 | FFCP PHASE2:Mm9::chr14:54794540..54794554,+#_335ef7ec06c914a9b56f64e919f0e99f | p@chr14:54794540..54794554, + |
| 2.23e-56 | FFCP PHASE1:Mm9::chr6:41491801..41491815,-#_7a75f8944a7a9138e5240d4d1a223fbd | p@chr6:41491801..41491815, - |
| 2.23e-56 | FFCP PHASE2:Mm9::chr6:41491801..41491815,-#_7a75f8944a7a9138e5240d4d1a223fbd | p@chr6:41491801..41491815, - |
| 2.23e-56 | FFCP PHASE1:Mm9::chr14:54496363..54496388,+#_7a75f8944a7a9138e5240d4d1a223fbd | p@chr14:54496363..54496388, + |
| 2.23e-56 | FFCP PHASE2:Mm9::chr14:54496363..54496388,+#_7a75f8944a7a9138e5240d4d1a223fbd | p@chr14:54496363..54496388, + |
| 2.36e-56 | FFCP PHASE1:Mm9::chr6:41492605..41492621,+#_b45d96bb192ca5afdabd3117e2d7aa20 | p@chr6:41492605..41492621, + |
| 2.36e-56 | FFCP PHASE2:Mm9::chr6:41492605..41492621,+#_b45d96bb192ca5afdabd3117e2d7aa20 | p@chr6:41492605..41492621, + |
| 2.54e-56 | FFCP PHASE1:Mm9::chr11:53448200..53448205,-#_7f4bf382a3a7db4dbefa0829e40b7659 | p1@Il13 |
| 2.54e-56 | FFCP PHASE2:Mm9::chr11:53448200..53448205,-#_7f4bf382a3a7db4dbefa0829e40b7659 | p1@Il13 |
| 2.88e-56 | FFCP PHASE2:Mm9::chr7:133512914..133512925,-#_1d4fdbf09ed246730ea565b3e0a11c87 | p7@Lat |
| 2.88e-56 | FFCP PHASE1:Mm9::chr7:133512914..133512925,-#_1d4fdbf09ed246730ea565b3e0a11c87 | p7@Lat |
| 3.14e-56 | FFCP PHASE2:Mm9::chr6:41138311..41138333,+#_2c9bdea54dff0546e9458fbe9faed95e | p@chr6:41138311..41138333, + |
| 3.14e-56 | FFCP PHASE1:Mm9::chr6:41138311..41138333,+#_2c9bdea54dff0546e9458fbe9faed95e | p@chr6:41138311..41138333, + |
| 4.06e-56 | FFCP PHASE1:Mm9::chr6:40996879..40996890,+#_ba73c13c967c851e8699a362f5d3f7ac | p5@uc009bnp.1, p5@uc012eki.1 |
| 4.06e-56 | FFCP PHASE2:Mm9::chr6:40996879..40996890,+#_ba73c13c967c851e8699a362f5d3f7ac | p5@uc009bnp.1, p5@uc012eki.1 |
| 4.76e-56 | FFCP PHASE1:Mm9::chr6:41483146..41483158,+#_d07064e042a9bbd7d27e0303bd19a97b | p6@uc009bpa.1 |
| 4.76e-56 | FFCP PHASE2:Mm9::chr7:133512935..133512936,-#_d07064e042a9bbd7d27e0303bd19a97b | p8@Lat |
| 4.76e-56 | FFCP PHASE1:Mm9::chr7:133512935..133512936,-#_d07064e042a9bbd7d27e0303bd19a97b | p8@Lat |
| 4.76e-56 | FFCP PHASE2:Mm9::chr6:41483146..41483158,+#_d07064e042a9bbd7d27e0303bd19a97b | p6@uc009bpa.1 |
| 4.76e-56 | FFCP PHASE2:Mm9::chr4:125978325..125978339,-#_d07064e042a9bbd7d27e0303bd19a97b | p@chr4:125978325..125978339, - |
| 4.76e-56 | FFCP PHASE1:Mm9::chr4:125978325..125978339,-#_d07064e042a9bbd7d27e0303bd19a97b | p@chr4:125978325..125978339, - |
| 3.9e-55 | FFCP PHASE2:Mm9::chr19:10904535..10904553,-#_3869b6df03ffe01db4a12c10055a1dbe | p2@Cd6 |
| 3.9e-55 | FFCP PHASE1:Mm9::chr19:10904535..10904553,-#_3869b6df03ffe01db4a12c10055a1dbe | p2@Cd6 |
| 4.2e-55 | FFCP PHASE2:Mm9::chr11:52075039..52075066,+#_46ad7618bec1f935c786391a19d946ca | p@chr11:52075039..52075066, + |
| 4.2e-55 | FFCP PHASE1:Mm9::chr11:52075039..52075066,+#_46ad7618bec1f935c786391a19d946ca | p@chr11:52075039..52075066, + |
