UBERON:0004872: Difference between revisions
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|located_in= | |located_in= | ||
|name=splanchnic layer of lateral plate mesoderm | |name=splanchnic layer of lateral plate mesoderm | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000922;;UBERON:0003081 | |part_of=UBERON:0000922;;UBERON:0003081 | ||
Latest revision as of 17:49, 12 September 2014
| Name: | splanchnic layer of lateral plate mesoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Layer of lateral plate mesoderm that forms the circulatory system and future gut wall - overlies endoderm[WP]." [Wikipedia:Lateral_plate_mesoderm#Division_into_layers] | ||
| Xrefs: |
| ||
| Synonyms: |
"inner layer of lateral plate mesoderm" EXACT [] "splanchnic mesoderm" RELATED [ISBN:9780878932504] "visceral mesoderm" BROAD [BILA:0000044, http://www.drugs.com/dict/visceral-mesoderm.html, http://www.stedmans.com/] | ||
| Comments: | todo - check BILA |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0000922(embryo),UBERON:0003081(lateral plate mesoderm) |
Children
| develops from: | UBERON:0001040 (yolk sac),UBERON:0001981 (blood vessel),UBERON:0004340 (allantois),UBERON:0005891 (coelomic epithelium),UBERON:0006293 (spleen primordium),UBERON:0007005 (cardiac mesoderm) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004872 (splanchnic layer of lateral plate mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.38e-91 | FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_5140c8532f7003be7f1060e5144843ce | p2@SOX17 |
| 2.38e-91 | FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_5140c8532f7003be7f1060e5144843ce | p2@SOX17 |
| 1.3e-70 | FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_2cca5271f3db14b85cf7251983bfcdb6 | p@chr12:96830430..96830450, + |
| 1.3e-70 | FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_2cca5271f3db14b85cf7251983bfcdb6 | p@chr12:96830430..96830450, + |
| 7.7e-69 | FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_78fa3a2213289f78a7f5a58e5d9fcac5 | p4@SULT1B1 |
| 7.7e-69 | FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_78fa3a2213289f78a7f5a58e5d9fcac5 | p4@SULT1B1 |
| 1.35e-66 | FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_4406f286d5521195adf5a83a112e03f3 | p@chr3:30334038..30334060, + |
| 1.35e-66 | FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_4406f286d5521195adf5a83a112e03f3 | p@chr3:30334038..30334060, + |
| 3.3e-66 | FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_8e1743e9cd07fcfe84539d673c80a5af | p3@SULT1B1 |
| 3.3e-66 | FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_8e1743e9cd07fcfe84539d673c80a5af | p3@SULT1B1 |
| 1.61e-64 | FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_bd76005f14ac992f3cfdf35dc711b25a | p1@ENST00000439823 |
| 1.61e-64 | FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_bd76005f14ac992f3cfdf35dc711b25a | p1@ENST00000439823 |
| 4.43e-59 | FFCP PHASE2:Hg19::chr11:128562673..128562716,-#_7d532eacb61c4abe67ea62e6bbc432cb | p@chr11:128562673..128562716, - |
| 4.43e-59 | FFCP PHASE1:Hg19::chr11:128562673..128562716,-#_7d532eacb61c4abe67ea62e6bbc432cb | p@chr11:128562673..128562716, - |
| 7.02e-57 | FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_717774197e51889dc3ae959a42d4ad72 | p@chr22:21138343..21138378, + |
| 7.02e-57 | FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_717774197e51889dc3ae959a42d4ad72 | p@chr22:21138343..21138378, + |
| 1.91e-56 | FFCP PHASE2:Hg19::chr1:21606171..21606188,-#_da019028347854013f332253021cde08 | p10@ECE1 |
| 1.91e-56 | FFCP PHASE1:Hg19::chr1:21606171..21606188,-#_da019028347854013f332253021cde08 | p10@ECE1 |
| 1.04e-54 | FFCP PHASE1:Hg19::chr4:145567374..145567390,+#_cbf7c85ca4ff5c95a30d0de85cf0be39 | p6@HHIP |
| 1.04e-54 | FFCP PHASE2:Hg19::chr4:145567374..145567390,+#_cbf7c85ca4ff5c95a30d0de85cf0be39 | p6@HHIP |
| 2.07e-54 | FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_88deb30491bd03f5ea49a84e9dceba84 | p4@MMP1 |
| 2.07e-54 | FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_88deb30491bd03f5ea49a84e9dceba84 | p4@MMP1 |
| 2.72e-54 | FFCP PHASE2:Hg19::chr14:63671393..63671437,+#_9b965de18e4f39c2fcce01391a4066d4 | p2@RHOJ |
| 2.72e-54 | FFCP PHASE1:Hg19::chr14:63671393..63671437,+#_9b965de18e4f39c2fcce01391a4066d4 | p2@RHOJ |
| 6.61e-53 | FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_84cc1226486a2f871ca4acc20b791390 | p@chr11:102667477..102667490, - |
| 6.61e-53 | FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_84cc1226486a2f871ca4acc20b791390 | p@chr11:102667477..102667490, - |
| 1.26e-52 | FFCP PHASE2:Hg19::chr8:55370487..55370503,+#_7348b160dff661b922baeeb305262155 | p1@SOX17 |
| 1.26e-52 | FFCP PHASE1:Hg19::chr8:55370487..55370503,+#_7348b160dff661b922baeeb305262155 | p1@SOX17 |
| 1.29e-52 | FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_2656d2b4385e3fbffa169c0e99169657 | p@chr4:7846444..7846449, - |
| 1.29e-52 | FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_2656d2b4385e3fbffa169c0e99169657 | p@chr4:7846444..7846449, - |
| 1.8e-52 | FFCP PHASE2:Hg19::chr4:145567563..145567572,+#_3c2b93ba6e09b31bc4addd21db672b3d | p8@HHIP |
| 1.8e-52 | FFCP PHASE1:Hg19::chr4:145567563..145567572,+#_3c2b93ba6e09b31bc4addd21db672b3d | p8@HHIP |
| 2.12e-52 | FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_83bca3b93a0474fa39f7d2f10e296d24 | p@chr10:4823096..4823144, - |
| 2.12e-52 | FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_83bca3b93a0474fa39f7d2f10e296d24 | p@chr10:4823096..4823144, - |
| 2.73e-52 | FFCP PHASE1:Hg19::chr4:145566841..145566862,+#_3d9d9de7c6dc7a1cbee9762567a44c5e | p10@HHIP |
| 2.73e-52 | FFCP PHASE2:Hg19::chr4:145566841..145566862,+#_3d9d9de7c6dc7a1cbee9762567a44c5e | p10@HHIP |
| 2.12e-51 | FFCP PHASE2:Hg19::chr1:79472458..79472472,-#_eda09eecdb90c75a71b6243ed664f012 | p3@ELTD1 |
| 2.12e-51 | FFCP PHASE1:Hg19::chr1:79472458..79472472,-#_eda09eecdb90c75a71b6243ed664f012 | p3@ELTD1 |
| 2.44e-51 | FFCP PHASE1:Hg19::chr6:153019023..153019043,+#_b82a76e950bf7db5128cda92eeea6284 | p2@MYCT1 |
| 2.44e-51 | FFCP PHASE2:Hg19::chr6:153019023..153019043,+#_b82a76e950bf7db5128cda92eeea6284 | p2@MYCT1 |
| 5.39e-50 | FFCP PHASE1:Hg19::chr2:109271481..109271493,+#_07495567484dd74dc2f47307799cc1aa | p6@LIMS1 |
| 5.39e-50 | FFCP PHASE2:Hg19::chr2:109271481..109271493,+#_07495567484dd74dc2f47307799cc1aa | p6@LIMS1 |
| 8.34e-50 | FFCP PHASE2:Hg19::chr4:145567426..145567455,+#_bff9a5a0305d3c57a956c7fc3404c2dd | p5@HHIP |
| 8.34e-50 | FFCP PHASE1:Hg19::chr4:145567426..145567455,+#_bff9a5a0305d3c57a956c7fc3404c2dd | p5@HHIP |
| 4.34e-49 | FFCP PHASE2:Hg19::chr11:102668016..102668028,-#_7a5cd38f245fea279892ede4ed574da1 | p5@MMP1 |
| 4.34e-49 | FFCP PHASE1:Hg19::chr11:102668016..102668028,-#_7a5cd38f245fea279892ede4ed574da1 | p5@MMP1 |
| 6.85e-49 | FFCP PHASE1:Hg19::chr3:149258838..149258848,-#_caa939f413c663a497103eec2f98655d | p24@WWTR1 |
| 6.85e-49 | FFCP PHASE2:Hg19::chr3:149258838..149258848,-#_caa939f413c663a497103eec2f98655d | p24@WWTR1 |
| 9.72e-49 | FFCP PHASE2:Hg19::chr1:21606132..21606156,-#_3e5a61e548fea1eec62a33ee2662f33d | p9@ECE1 |
| 9.72e-49 | FFCP PHASE1:Hg19::chr1:21606132..21606156,-#_3e5a61e548fea1eec62a33ee2662f33d | p9@ECE1 |
| 3.07e-48 | FFCP PHASE1:Hg19::chr4:145567391..145567425,+#_12952ab4dd0d3ba40d5d83508d8d04a3 | p4@HHIP |
| 3.07e-48 | FFCP PHASE2:Hg19::chr4:145567391..145567425,+#_12952ab4dd0d3ba40d5d83508d8d04a3 | p4@HHIP |
| 5.7e-48 | FFCP PHASE1:Hg19::chr5:54281535..54281547,-#_a6b2f146035c60d8c7bd27ce5154bc2e | p2@ESM1 |
| 5.7e-48 | FFCP PHASE2:Hg19::chr5:54281535..54281547,-#_a6b2f146035c60d8c7bd27ce5154bc2e | p2@ESM1 |
| 1.35e-47 | FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_1c8f8118170b970af6bccec9ad5faabd | p@chr11:102668178..102668206, + |
| 1.35e-47 | FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_1c8f8118170b970af6bccec9ad5faabd | p@chr11:102668178..102668206, + |
| 1.62e-47 | FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_8eb9e52951c64876d4a82956bf934dbc | p@chr11:102662162..102662217, - |
| 1.62e-47 | FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_8eb9e52951c64876d4a82956bf934dbc | p@chr11:102662162..102662217, - |
| 2.53e-47 | FFCP PHASE2:Hg19::chr22:50553000..50553012,+#_14a53f0e55d54c805390f165afc8af7e | p2@MOV10L1 |
| 2.53e-47 | FFCP PHASE1:Hg19::chr22:50553000..50553012,+#_14a53f0e55d54c805390f165afc8af7e | p2@MOV10L1 |
| 3.06e-47 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_53965fa67a454560822a0b880438182f | p@chr11:102661517..102661541, - |
| 3.06e-47 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_53965fa67a454560822a0b880438182f | p@chr11:102661517..102661541, - |
| 7.02e-47 | FFCP PHASE2:Hg19::chr1:186946626..186946652,+#_8d8205ce4b26099996c16a103342ea8b | p@chr1:186946626..186946652, + |
| 7.02e-47 | FFCP PHASE1:Hg19::chr1:186946626..186946652,+#_8d8205ce4b26099996c16a103342ea8b | p@chr1:186946626..186946652, + |
| 9.67e-47 | FFCP PHASE2:Hg19::chr9:27109392..27109435,+#_3f286b25d47f25a7494b035b6835c4a1 | p1@TEK |
| 9.67e-47 | FFCP PHASE1:Hg19::chr9:27109392..27109435,+#_3f286b25d47f25a7494b035b6835c4a1 | p1@TEK |
| 1.31e-46 | FFCP PHASE1:Hg19::chr5:141060389..141060439,-#_3d97fb2f5dec448200962b84247dba6d | p3@ARAP3 |
| 1.31e-46 | FFCP PHASE2:Hg19::chr5:141060389..141060439,-#_3d97fb2f5dec448200962b84247dba6d | p3@ARAP3 |
| 2.48e-46 | FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_17d81d5fe393e5554037c8e525917932 | p@chr19:36187511..36187515, - |
| 2.48e-46 | FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_17d81d5fe393e5554037c8e525917932 | p@chr19:36187511..36187515, - |
| 3.1e-46 | FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_5507afb86c0202107f7bbc7028619cb4 | p@chr22:21138313..21138336, + |
| 3.1e-46 | FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_5507afb86c0202107f7bbc7028619cb4 | p@chr22:21138313..21138336, + |
| 1.43e-45 | FFCP PHASE1:Hg19::chr1:79472477..79472510,-#_43d88c1c8acadbb63c236ec4948d0575 | p2@ELTD1 |
| 1.43e-45 | FFCP PHASE2:Hg19::chr1:79472477..79472510,-#_43d88c1c8acadbb63c236ec4948d0575 | p2@ELTD1 |
| 2.23e-45 | FFCP PHASE2:Hg19::chr11:86649508..86649546,-#_0de06e67404131a90482e511f3e9658f | p@chr11:86649508..86649546, - |
| 2.23e-45 | FFCP PHASE1:Hg19::chr11:86649508..86649546,-#_0de06e67404131a90482e511f3e9658f | p@chr11:86649508..86649546, - |
| 2.6e-45 | FFCP PHASE1:Hg19::chr6:153019069..153019091,+#_869923e2151b779887bd808339d818f0 | p1@MYCT1 |
| 2.6e-45 | FFCP PHASE2:Hg19::chr6:153019069..153019091,+#_869923e2151b779887bd808339d818f0 | p1@MYCT1 |
| 8.03e-45 | FFCP PHASE1:Hg19::chr4:145567356..145567368,+#_9a8463d766752c2cab60a0d82cd3a0b8 | p7@HHIP |
| 8.03e-45 | FFCP PHASE2:Hg19::chr4:145567356..145567368,+#_9a8463d766752c2cab60a0d82cd3a0b8 | p7@HHIP |
| 9.8e-45 | FFCP PHASE2:Hg19::chr1:21606082..21606114,-#_11e549f5bb4a91920a990ca4dccbcb9d | p7@ECE1 |
| 9.8e-45 | FFCP PHASE1:Hg19::chr1:21606082..21606114,-#_11e549f5bb4a91920a990ca4dccbcb9d | p7@ECE1 |
| 1.88e-44 | FFCP PHASE2:Hg19::chr17:25887330..25887369,+#_3c664e188caecf9ad0c60c0a380fd507 | p2@KSR1 |
| 1.88e-44 | FFCP PHASE1:Hg19::chr17:25887330..25887369,+#_3c664e188caecf9ad0c60c0a380fd507 | p2@KSR1 |
| 2.54e-44 | FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_c90bc39f4ab474968193400cd563208e | p3@MMP1 |
| 2.54e-44 | FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_c90bc39f4ab474968193400cd563208e | p3@MMP1 |
| 7.76e-44 | FFCP PHASE2:Hg19::chr10:13934004..13934022,-#_c618c07f684ad0179ae130d2fe0d7f8c | p@chr10:13934004..13934022, - |
| 7.76e-44 | FFCP PHASE1:Hg19::chr10:13934004..13934022,-#_c618c07f684ad0179ae130d2fe0d7f8c | p@chr10:13934004..13934022, - |
| 9.18e-44 | FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_d1b0d5a1b21b1b08542e2fb9e0df2467 | p@chr4:147375434..147375447, + |
| 9.18e-44 | FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_d1b0d5a1b21b1b08542e2fb9e0df2467 | p@chr9:24549775..24549776, - |
| 9.18e-44 | FFCP PHASE2:Mm9::chr4:151692832..151692868,+#_d1b0d5a1b21b1b08542e2fb9e0df2467 | p@chr4:151692832..151692868, + |
| 9.18e-44 | FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_d1b0d5a1b21b1b08542e2fb9e0df2467 | p@chr1:137747392..137747402, - |
| 9.18e-44 | FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_d1b0d5a1b21b1b08542e2fb9e0df2467 | p@chr1:137747392..137747402, - |
| 9.18e-44 | FFCP PHASE1:Mm9::chr4:151692832..151692868,+#_d1b0d5a1b21b1b08542e2fb9e0df2467 | p@chr4:151692832..151692868, + |
| 9.18e-44 | FFCP PHASE1:Mm9::chr8:87888940..87888961,-#_d1b0d5a1b21b1b08542e2fb9e0df2467 | p@chr8:87888940..87888961, - |
| 9.18e-44 | FFCP PHASE2:Mm9::chr8:87888940..87888961,-#_d1b0d5a1b21b1b08542e2fb9e0df2467 | p@chr8:87888940..87888961, - |
| 9.18e-44 | FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_d1b0d5a1b21b1b08542e2fb9e0df2467 | p@chr9:24549775..24549776, - |
| 9.18e-44 | FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_d1b0d5a1b21b1b08542e2fb9e0df2467 | p@chr4:147375434..147375447, + |
| 1.23e-43 | FFCP PHASE1:Hg19::chr16:86964992..86965035,-#_1eb1487a92c521128c488ef0d820ab84 | p@chr16:86964992..86965035, - |
| 1.23e-43 | FFCP PHASE2:Hg19::chr16:86964992..86965035,-#_1eb1487a92c521128c488ef0d820ab84 | p@chr16:86964992..86965035, - |
