UBERON:0002294: Difference between revisions
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|located_in= | |located_in= | ||
|name=biliary system | |name=biliary system | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002423 | |part_of=UBERON:0002423 | ||
Latest revision as of 17:28, 12 September 2014
| Name: | biliary system | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Anatomical system that consists of the organs and ducts (bile ducts, gallbladder, and associated structures) that are involved in the production and transportation of bile." [Wikipedia:Biliary_system] | ||
| Xrefs: |
| ||
| Synonyms: | "biliary apparatus" EXACT [] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_79646-MA_0001273 | ||
| Subset: | uberon_slim |
200px-Digestive_system_showing_bile_duct.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000467(anatomical system) |
|---|---|
| disjoint_from: | UBERON:0002330(exocrine system),UBERON:0002390(hematopoietic system),UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system) |
| part_of: | UBERON:0002423(hepatobiliary system) |
Children
| disjoint from: | UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system) |
|---|---|
| part of: | UBERON:0001173 (biliary tree),UBERON:0002394 (bile duct) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10198-103E9 (gall bladder, adult)
- 10415-106C1 (gall bladder carcinoma cell line:TGBC2TKB)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
- 10432-106D9 (bile duct carcinoma cell line:HuCCT1)
- 10470-106I2 (gall bladder carcinoma cell line:TGBC14TKB)
- 10496-107C1 (bile duct carcinoma cell line:TFK-1)
- 10533-107G2
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10627-108H6
- 10629-108H8
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002294 (biliary system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:34796428..34796430, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:117829935..117829959, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr12:87046930..87046933, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr10:93942324..93942342, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:119254092..119254100, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr10:85585991..85586025, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr1:138241693..138241697, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr10:21389022..21389032, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr5:64344878..64344887, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr4:100890388..100890423, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr13:113053257..113053258, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr10:94580525..94580530, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr16:30944451..30944485, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr8:87745380..87745385, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:115280630..115280662, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:35106749..35106752, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr2:169549462..169549477, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr12:86691575..86691580, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:28107053..28107062, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:109223756..109223764, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr8:3311867..3311873, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:35093764..35093773, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr12:86691530..86691535, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr8:86713876..86713879, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:35093377..35093381, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr12:8400090..8400093, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:88890706..88890745, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p4@Pag1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p8@Map3k8 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr13:100000226..100000230, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr10:8586393..8586401, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr4:141645056..141645068, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr9:116223548..116223551, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr3:90270007..90270012, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr18:35900327..35900366, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr16:85547242..85547252, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr5:75375903..75375931, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p4@Gm4262 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p6@Adamts1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr8:114123814..114123821, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:35106363..35106372, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr1:66883923..66883955, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr13:100000226..100000230, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:109223756..109223764, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr6:48398664..48398684, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr15:88669906..88669914, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr1:137570295..137570315, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr18:5125608..5125613, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr15:82193340..82193343, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr10:93819538..93819549, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr9:42915220..42915225, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:34798555..34798562, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:12388232..12388237, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:67870501..67870507, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr12:81955014..81955018, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr9:116223548..116223551, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:119254092..119254100, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr8:25530071..25530072, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr2:84756280..84756286, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr10:85586219..85586227, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr9:42915101..42915106, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr7:118133901..118133904, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr16:91441786..91441787, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr15:88669906..88669914, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:117737077..117737096, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr15:59435855..59435878, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr6:34549876..34549892, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr7:109031260..109031268, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:35945332..35945335, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:68437375..68437378, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:109223779..109223789, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr6:91441074..91441080, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:35094068..35094092, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:11183699..11183703,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr8:11183699..11183703, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr12:86691575..86691580, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr11:88890706..88890745, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr6:129180613..129180616, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:39513150..39513152,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr18:39513150..39513152, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr12:85288471..85288502, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr17:28107053..28107062, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr5:32912678..32912687, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_ec700c5f8c4a9b77e8d490cfed8cbd04 | p@chr1:186559285..186559288, + |
