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|located_in=
|located_in=
|name=vestibulo-auditory system
|name=vestibulo-auditory system
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 17:26, 12 September 2014

Name:vestibulo-auditory system
Namespace:FANTOM
Definition:"A sensory system for the sense of hearing[WP]." [Wikipedia:Auditory_system]
Xrefs:
links:

AAO:0000631
FMA:7192
FMA:78500
[1]
[2]
MA:0002443
ncithesaurus:Auditory_System
NIF_GrossAnatomy:nlx_anat_090817
OpenCyc:Mx4rvViwtJwpEbGdrcN5Y29ycA
TAO:0001138
XAO:0003195

ZFA:0001138
Synonyms: "auditory organ system" EXACT []
"auditory system" RELATED []
"auditory/vestibular system" RELATED []
"vestibuloauditory system" EXACT []
"vestibuloauditory system" RELATED []
Comments:Auditory system is general anatomical term in FMA
Alt_id: UBERON:FMA_7192-MA_0002443
Subset: functional_classification
uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001032(sensory system)



Children

part of:UBERON:0001690 (ear),UBERON:0002827 (vestibulocochlear ganglion),UBERON:0004681 (vestibular system),UBERON:0016490 (auditory system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 11959-126C6 (Neurons - spiral ganglion, pool1)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002105 (vestibulo-auditory system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_c61890a629f48235895cf0426ce3701cp@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_c61890a629f48235895cf0426ce3701cp@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_c61890a629f48235895cf0426ce3701cp@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_c61890a629f48235895cf0426ce3701cp@chr7:29733825..29733837, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_c61890a629f48235895cf0426ce3701cp1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_c61890a629f48235895cf0426ce3701cp18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_c61890a629f48235895cf0426ce3701cp@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_c61890a629f48235895cf0426ce3701cp@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_c61890a629f48235895cf0426ce3701cp@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_c61890a629f48235895cf0426ce3701cp1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_c61890a629f48235895cf0426ce3701cp13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_c61890a629f48235895cf0426ce3701cp4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_c61890a629f48235895cf0426ce3701cp@chr6:113251606..113251613, +
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_c61890a629f48235895cf0426ce3701cp@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_c61890a629f48235895cf0426ce3701cp@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_c61890a629f48235895cf0426ce3701cp@chr6:86745686..86745727, -
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_c61890a629f48235895cf0426ce3701cp@chr11:4689776..4689785, -
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_c61890a629f48235895cf0426ce3701cp1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_c61890a629f48235895cf0426ce3701cp12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_c61890a629f48235895cf0426ce3701cp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_c61890a629f48235895cf0426ce3701cp1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_c61890a629f48235895cf0426ce3701cp@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_c61890a629f48235895cf0426ce3701cp@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_c61890a629f48235895cf0426ce3701cp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_c61890a629f48235895cf0426ce3701cp@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_c61890a629f48235895cf0426ce3701cp1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_c61890a629f48235895cf0426ce3701cp6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_c61890a629f48235895cf0426ce3701cp2@Plscr5
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_c61890a629f48235895cf0426ce3701cp@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_c61890a629f48235895cf0426ce3701cp@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_c61890a629f48235895cf0426ce3701cp@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_c61890a629f48235895cf0426ce3701cp2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_c61890a629f48235895cf0426ce3701cp12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_c61890a629f48235895cf0426ce3701cp6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_c61890a629f48235895cf0426ce3701cp@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_c61890a629f48235895cf0426ce3701cp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_c61890a629f48235895cf0426ce3701cp@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_c61890a629f48235895cf0426ce3701cp@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_c61890a629f48235895cf0426ce3701cp3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_c61890a629f48235895cf0426ce3701cp3@Strc
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_c61890a629f48235895cf0426ce3701cp@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_c61890a629f48235895cf0426ce3701cp2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_c61890a629f48235895cf0426ce3701cp@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_c61890a629f48235895cf0426ce3701cp@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_c61890a629f48235895cf0426ce3701cp@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_c61890a629f48235895cf0426ce3701cp@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_c61890a629f48235895cf0426ce3701cp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_c61890a629f48235895cf0426ce3701cp@chr4:133802857..133802884, +
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_c61890a629f48235895cf0426ce3701cp@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_c61890a629f48235895cf0426ce3701cp@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_c61890a629f48235895cf0426ce3701cp@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_c61890a629f48235895cf0426ce3701cp@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_c61890a629f48235895cf0426ce3701cp@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_c61890a629f48235895cf0426ce3701cp3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_c61890a629f48235895cf0426ce3701cp@chr6:29428397..29428407, -
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_c61890a629f48235895cf0426ce3701cp3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_c61890a629f48235895cf0426ce3701cp@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_c61890a629f48235895cf0426ce3701cp@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_c61890a629f48235895cf0426ce3701cp@chr15:58022966..58022995, -
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_c61890a629f48235895cf0426ce3701cp@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_c61890a629f48235895cf0426ce3701cp@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_c61890a629f48235895cf0426ce3701cp@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_c61890a629f48235895cf0426ce3701cp@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_c61890a629f48235895cf0426ce3701cp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_c61890a629f48235895cf0426ce3701cp9@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_c61890a629f48235895cf0426ce3701cp@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_c61890a629f48235895cf0426ce3701cp@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_c61890a629f48235895cf0426ce3701cp@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_c61890a629f48235895cf0426ce3701cp@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_c61890a629f48235895cf0426ce3701cp@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_c61890a629f48235895cf0426ce3701cp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_c61890a629f48235895cf0426ce3701cp@chr17:13983095..13983100, +
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_c61890a629f48235895cf0426ce3701cp@chr14:63099970..63099980, -
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_c61890a629f48235895cf0426ce3701cp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_c61890a629f48235895cf0426ce3701cp@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_c61890a629f48235895cf0426ce3701cp2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_c61890a629f48235895cf0426ce3701cp@chr8:13425469..13425503, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_c61890a629f48235895cf0426ce3701cp2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_c61890a629f48235895cf0426ce3701cp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_c61890a629f48235895cf0426ce3701cp5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_c61890a629f48235895cf0426ce3701cp3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_c61890a629f48235895cf0426ce3701cp@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_c61890a629f48235895cf0426ce3701cp4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_c61890a629f48235895cf0426ce3701cp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_c61890a629f48235895cf0426ce3701cp3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_c61890a629f48235895cf0426ce3701cp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_c61890a629f48235895cf0426ce3701cp2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_c61890a629f48235895cf0426ce3701cp@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_c61890a629f48235895cf0426ce3701cp@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_c61890a629f48235895cf0426ce3701cp@chr9:42206730..42206739, -
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_c61890a629f48235895cf0426ce3701cp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_c61890a629f48235895cf0426ce3701cp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_c61890a629f48235895cf0426ce3701cp1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_c61890a629f48235895cf0426ce3701cp@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_c61890a629f48235895cf0426ce3701cp2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_c61890a629f48235895cf0426ce3701cp@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_c61890a629f48235895cf0426ce3701cp@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_c61890a629f48235895cf0426ce3701cp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_c61890a629f48235895cf0426ce3701cp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_c61890a629f48235895cf0426ce3701cp@chr12:77084875..77084885, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "The sensory system used for balance and hearing.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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