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|located_in=
|located_in=
|name=frontal cortex
|name=frontal cortex
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0016525
|part_of=UBERON:0016525

Latest revision as of 17:21, 12 September 2014

Name:frontal cortex
Namespace:FANTOM
Definition:"Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border." [Wikipedia:Frontal_lobe]
Xrefs:
links:

BM:Tel-Cx-FR
BTO:0000484
EFO:0000913
EV:0100167
FMA:61824
GAID:674
[ Gray729.png Gray729.png]
[ 200px-Gray729.png 200px-Gray729.png]
MA:0000905
MAT:0000505
MESH:A.08.186.211.730.885.213.270
ncithesaurus:Frontal_Lobe
NIF_GrossAnatomy:birnlex_928
NIF_GrossAnatomy:nlx_anat_20090601
OpenCyc:Mx4rv3OJ8JwpEbGdrcN5Y29ycA

SCTID:180920004
Synonyms: "frontal lobe" EXACT [FMA:61824]
"frontal region" EXACT []
"lobus frontalis" RELATED LATIN [Wikipedia:Frontal_lobe]
"regio frontalis" EXACT [FMA:61824, FMA:TA]
Comments:Editor note: Many species don't have lobes but they do have frontal cortex. Lobe isn't a really well defined term though [MM]
Alt_id: UBERON:FMA_61824-MA_0000905
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0016529(cortex of cerebral lobe)
part_of:UBERON:0016525(frontal lobe)



Children

derives from:FF:0010040 (human frontal lobe - adult sample)
part of:UBERON:0002702 (middle frontal gyrus),UBERON:0015593 (frontal gyrus)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001870 (frontal cortex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
7.78e-118FFCP PHASE2:Hg19::chr4:176828307..176828316,-#_f4cad9e52bf0066fd1dd5690f753114bp35@GPM6A
7.78e-118FFCP PHASE1:Hg19::chr4:176828307..176828316,-#_f4cad9e52bf0066fd1dd5690f753114bp35@GPM6A
1.52e-87FFCP PHASE2:Hg19::chr5:160720498..160720507,-#_98a78fc70904259170d399847842994dp@chr5:160720498..160720507, -
1.52e-87FFCP PHASE1:Hg19::chr5:160720498..160720507,-#_98a78fc70904259170d399847842994dp@chr5:160720498..160720507, -
3.35e-66FFCP PHASE2:Hg19::chr6:133275544..133275556,+#_9b9b2616b100bd0e601477c6293f2a54p@chr6:133275544..133275556, +
3.35e-66FFCP PHASE1:Hg19::chr6:133275544..133275556,+#_9b9b2616b100bd0e601477c6293f2a54p@chr6:133275544..133275556, +
3.35e-66FFCP PHASE1:Hg19::chr2:179693063..179693074,+#_9b9b2616b100bd0e601477c6293f2a54p@chr2:179693063..179693074, +
3.35e-66FFCP PHASE2:Hg19::chr2:179693063..179693074,+#_9b9b2616b100bd0e601477c6293f2a54p@chr2:179693063..179693074, +
4.68e-66FFCP PHASE2:Hg19::chrX:12083655..12083665,+#_045e27b854b456d25b1cd1e0ea1ed9b6p@chrX:12083655..12083665, +
4.68e-66FFCP PHASE2:Hg19::chr8:24773140..24773144,+#_045e27b854b456d25b1cd1e0ea1ed9b6p20@NEFM
4.68e-66FFCP PHASE1:Hg19::chrX:12083655..12083665,+#_045e27b854b456d25b1cd1e0ea1ed9b6p@chrX:12083655..12083665, +
4.68e-66FFCP PHASE1:Hg19::chr8:24773140..24773144,+#_045e27b854b456d25b1cd1e0ea1ed9b6p20@NEFM
3.65e-60FFCP PHASE1:Hg19::chr21:16999470..16999481,-#_efe5ab200f931e41399c4954770d8e92p@chr21:16999470..16999481, -
3.65e-60FFCP PHASE2:Hg19::chr21:16999470..16999481,-#_efe5ab200f931e41399c4954770d8e92p@chr21:16999470..16999481, -
5.46e-60FFCP PHASE2:Hg19::chr18:5721892..5721909,+#_168340e5becdfc460f5d637533d4720bp@chr18:5721892..5721909, +
5.46e-60FFCP PHASE1:Hg19::chr18:5721892..5721909,+#_168340e5becdfc460f5d637533d4720bp@chr18:5721892..5721909, +
1.83e-59FFCP PHASE2:Hg19::chr12:75601501..75601517,-#_2f6486e32605d8a2abdf8cd49a475fd1p11@KCNC2
1.83e-59FFCP PHASE1:Hg19::chr12:75601501..75601517,-#_2f6486e32605d8a2abdf8cd49a475fd1p11@KCNC2
2.23e-59FFCP PHASE2:Hg19::chr12:55368219..55368234,-#_79d5c0ffad17e236b715519495a70fa4p@chr12:55368219..55368234, -
2.23e-59FFCP PHASE1:Hg19::chr12:55368219..55368234,-#_79d5c0ffad17e236b715519495a70fa4p@chr12:55368219..55368234, -
2.61e-54FFCP PHASE1:Hg19::chr2:73493786..73493808,-#_043a006cc24734cd788a910e5bf40eacp10@FBXO41
2.61e-54FFCP PHASE2:Hg19::chr2:73493786..73493808,-#_043a006cc24734cd788a910e5bf40eacp10@FBXO41
3.13e-54FFCP PHASE1:Hg19::chr12:120240554..120240562,-#_40332edce0484a3a9d9711866aa4b871p@chr12:120240554..120240562, -
3.13e-54FFCP PHASE2:Hg19::chr12:120240554..120240562,-#_40332edce0484a3a9d9711866aa4b871p@chr12:120240554..120240562, -
3.76e-54FFCP PHASE2:Hg19::chr7:39018373..39018384,+#_5103f150022fdada07db28f597b96643p@chr7:39018373..39018384, +
3.76e-54FFCP PHASE1:Hg19::chr7:39018373..39018384,+#_5103f150022fdada07db28f597b96643p@chr7:39018373..39018384, +
2.87e-53FFCP PHASE1:Hg19::chr2:17830681..17830687,+#_87fef0000773566bdb1915c89fbdeb6bp@chr2:17830681..17830687, +
2.87e-53FFCP PHASE2:Hg19::chr2:17830681..17830687,+#_87fef0000773566bdb1915c89fbdeb6bp@chr2:17830681..17830687, +
4.89e-53FFCP PHASE1:Hg19::chr6:133275530..133275540,+#_7e0b6d220781c8a5bc3537e04f90c6d4p@chr6:133275530..133275540, +
4.89e-53FFCP PHASE2:Hg19::chr6:133275530..133275540,+#_7e0b6d220781c8a5bc3537e04f90c6d4p@chr6:133275530..133275540, +
6.39e-53FFCP PHASE2:Hg19::chr13:99174373..99174384,-#_63c5efe6dbefe0dbd8d837691a8e4e4bp20@STK24
6.39e-53FFCP PHASE1:Hg19::chr13:99174373..99174384,-#_63c5efe6dbefe0dbd8d837691a8e4e4bp20@STK24
9.6e-51FFCP PHASE2:Hg19::chr2:220812508..220812521,+#_7647dd24a967a56c4dbf377deb63a1dcp@chr2:220812508..220812521, +
9.6e-51FFCP PHASE1:Hg19::chr2:220812508..220812521,+#_7647dd24a967a56c4dbf377deb63a1dcp@chr2:220812508..220812521, +
3.13e-50FFCP PHASE1:Hg19::chr12:91069081..91069092,+#_b95e5286c973c87ec33b46d04459a2b3p@chr12:91069081..91069092, +
3.13e-50FFCP PHASE2:Hg19::chr12:91069081..91069092,+#_b95e5286c973c87ec33b46d04459a2b3p@chr12:91069081..91069092, +
5.18e-50FFCP PHASE2:Hg19::chr3:123813487..123813494,+#_bc0559c7bd994a8ef426eac98d441aa8p22@KALRN
5.18e-50FFCP PHASE1:Hg19::chr3:123813487..123813494,+#_bc0559c7bd994a8ef426eac98d441aa8p22@KALRN
6.12e-50FFCP PHASE2:Hg19::chr17:57604227..57604236,-#_1810109cb36c38e86c721bfb67c4221ap@chr17:57604227..57604236, -
6.12e-50FFCP PHASE1:Hg19::chr17:57604227..57604236,-#_1810109cb36c38e86c721bfb67c4221ap@chr17:57604227..57604236, -
8.56e-50FFCP PHASE2:Hg19::chr14:71679425..71679447,+#_e9cf6aa91dc4bb4f2f998d8942f2338ap1@ENST00000553621
8.56e-50FFCP PHASE1:Hg19::chr14:71679425..71679447,+#_e9cf6aa91dc4bb4f2f998d8942f2338ap1@ENST00000553621
8.56e-50FFCP PHASE1:Hg19::chr10:68687632..68687644,+#_e9cf6aa91dc4bb4f2f998d8942f2338ap3@LRRTM3
8.56e-50FFCP PHASE2:Hg19::chr10:68687632..68687644,+#_e9cf6aa91dc4bb4f2f998d8942f2338ap3@LRRTM3
1.2e-49FFCP PHASE1:Hg19::chr2:76412119..76412138,+#_c92096bc79e1a380f24a96e413320a96p@chr2:76412119..76412138, +
1.2e-49FFCP PHASE2:Hg19::chr2:76412119..76412138,+#_c92096bc79e1a380f24a96e413320a96p@chr2:76412119..76412138, +
1.41e-49FFCP PHASE1:Hg19::chr3:123813509..123813520,+#_442182b91e02880b0fc3fa32a038d038p23@KALRN
1.41e-49FFCP PHASE2:Hg19::chr3:123813509..123813520,+#_442182b91e02880b0fc3fa32a038d038p23@KALRN
1.67e-49FFCP PHASE1:Hg19::chr8:56446949..56446952,+#_f876c60a71df1e6692333bd51262ff30p@chr8:56446949..56446952, +
1.67e-49FFCP PHASE2:Hg19::chr8:56446949..56446952,+#_f876c60a71df1e6692333bd51262ff30p@chr8:56446949..56446952, +
4.73e-47FFCP PHASE2:Hg19::chr4:118292684..118292695,+#_4ef2c61f9b3537c6589c143e98ac98f1p@chr4:118292684..118292695, +
4.73e-47FFCP PHASE1:Hg19::chr4:118292684..118292695,+#_4ef2c61f9b3537c6589c143e98ac98f1p@chr4:118292684..118292695, +
2.62e-46FFCP PHASE2:Hg19::chr5:68290656..68290670,-#_d702a2907ac4f5e67cfe0cc86685cb6cp@chr5:68290656..68290670, -
2.62e-46FFCP PHASE1:Hg19::chr5:68290656..68290670,-#_d702a2907ac4f5e67cfe0cc86685cb6cp@chr5:68290656..68290670, -
3.06e-46FFCP PHASE1:Hg19::chr4:118292629..118292651,+#_486d6004b7438b9cc781152e30d61579p@chr4:118292629..118292651, +
3.06e-46FFCP PHASE2:Hg19::chr4:118292629..118292651,+#_486d6004b7438b9cc781152e30d61579p@chr4:118292629..118292651, +
5.68e-46FFCP PHASE2:Hg19::chr12:79611406..79611425,+#_9963b5d808ec47aef3d7ef3994cbd414p4@AB384875
5.68e-46FFCP PHASE1:Hg19::chr12:79611406..79611425,+#_9963b5d808ec47aef3d7ef3994cbd414p4@AB384875
6.25e-45FFCP PHASE2:Hg19::chr7:107302674..107302681,-#_a234c0344042b3604f365afbabe7f43bp3@ENST00000449741
6.25e-45FFCP PHASE1:Hg19::chr7:107302674..107302681,-#_a234c0344042b3604f365afbabe7f43bp3@ENST00000449741
9.77e-45FFCP PHASE1:Hg19::chr8:4174981..4174993,+#_87b969845d3c803aecf1d33366661c02p@chr8:4174981..4174993, +
9.77e-45FFCP PHASE2:Hg19::chr5:143108438..143108440,-#_87b969845d3c803aecf1d33366661c02p@chr5:143108438..143108440, -
9.77e-45FFCP PHASE1:Hg19::chr5:143108438..143108440,-#_87b969845d3c803aecf1d33366661c02p@chr5:143108438..143108440, -
9.77e-45FFCP PHASE2:Hg19::chr8:4174981..4174993,+#_87b969845d3c803aecf1d33366661c02p@chr8:4174981..4174993, +
1.22e-44FFCP PHASE1:Hg19::chr10:64136269..64136280,+#_5ac94b86fa0d098bee0c1b7e1a1d6e55p8@ZNF365
1.22e-44FFCP PHASE2:Hg19::chr10:64136269..64136280,+#_5ac94b86fa0d098bee0c1b7e1a1d6e55p8@ZNF365
1.22e-44FFCP PHASE2:Hg19::chr13:53938493..53938506,+#_5ac94b86fa0d098bee0c1b7e1a1d6e55p@chr13:53938493..53938506, +
1.22e-44FFCP PHASE1:Hg19::chr13:53938493..53938506,+#_5ac94b86fa0d098bee0c1b7e1a1d6e55p@chr13:53938493..53938506, +
1.53e-44FFCP PHASE2:Hg19::chr1:6094185..6094192,-#_5d1f1451e02e21d277971e6022869027p@chr1:6094185..6094192, -
1.53e-44FFCP PHASE2:Hg19::chr14:76241802..76241811,+#_5d1f1451e02e21d277971e6022869027p@chr14:76241802..76241811, +
1.53e-44FFCP PHASE1:Hg19::chr14:76241802..76241811,+#_5d1f1451e02e21d277971e6022869027p@chr14:76241802..76241811, +
1.53e-44FFCP PHASE1:Hg19::chr1:6094185..6094192,-#_5d1f1451e02e21d277971e6022869027p@chr1:6094185..6094192, -
1.91e-44FFCP PHASE1:Hg19::chr2:86707340..86707351,+#_0ebd37e6b4a36550408a53cc23011923p@chr2:86707340..86707351, +
1.91e-44FFCP PHASE1:Hg19::chr18:70210391..70210400,-#_0ebd37e6b4a36550408a53cc23011923p@chr18:70210391..70210400, -
1.91e-44FFCP PHASE2:Hg19::chr2:86707340..86707351,+#_0ebd37e6b4a36550408a53cc23011923p@chr2:86707340..86707351, +
1.91e-44FFCP PHASE2:Hg19::chr18:70210391..70210400,-#_0ebd37e6b4a36550408a53cc23011923p@chr18:70210391..70210400, -
1.91e-44FFCP PHASE1:Hg19::chr17:29623088..29623102,-#_0ebd37e6b4a36550408a53cc23011923p6@OMG
1.91e-44FFCP PHASE2:Hg19::chr17:29623088..29623102,-#_0ebd37e6b4a36550408a53cc23011923p6@OMG
2.38e-44FFCP PHASE2:Hg19::chr1:36181014..36181023,-#_8c26389aa94e43c25340e3092aece1ecp@chr1:36181014..36181023, -
2.38e-44FFCP PHASE1:Hg19::chr1:36181014..36181023,-#_8c26389aa94e43c25340e3092aece1ecp@chr1:36181014..36181023, -
5.19e-44FFCP PHASE2:Hg19::chr12:45307764..45307772,-#_d02747af90b63357e14d8eba084b382cp16@NELL2
5.19e-44FFCP PHASE1:Hg19::chr12:45307764..45307772,-#_d02747af90b63357e14d8eba084b382cp16@NELL2
6.0e-44FFCP PHASE2:Hg19::chr21:16999573..16999589,-#_23e0a347051773951016b9f5de73862fp@chr21:16999573..16999589, -
6.0e-44FFCP PHASE1:Hg19::chr21:16999573..16999589,-#_23e0a347051773951016b9f5de73862fp@chr21:16999573..16999589, -
1.92e-43FFCP PHASE1:Hg19::chr12:90987338..90987355,+#_bd0b6f334623b88b7fa0abac755da991p@chr12:90987338..90987355, +
1.92e-43FFCP PHASE2:Hg19::chr12:90987338..90987355,+#_bd0b6f334623b88b7fa0abac755da991p@chr12:90987338..90987355, +
2.95e-43FFCP PHASE2:Hg19::chr4:90625735..90625756,-#_7083ca3d76fb104379db9a49259c0103p@chr4:90625735..90625756, -
2.95e-43FFCP PHASE1:Hg19::chr4:90625735..90625756,-#_7083ca3d76fb104379db9a49259c0103p@chr4:90625735..90625756, -
3.94e-43FFCP PHASE1:Hg19::chr18:35145465..35145472,-#_7fd22fd354cb0f98141dd1a151003a54p10@CELF4
3.94e-43FFCP PHASE2:Hg19::chr18:35145465..35145472,-#_7fd22fd354cb0f98141dd1a151003a54p10@CELF4
4.55e-43FFCP PHASE2:Hg19::chr8:48758335..48758346,-#_17361db7a65b4978355b9a2a181805c7p@chr8:48758335..48758346, -
4.55e-43FFCP PHASE1:Hg19::chr8:48758335..48758346,-#_17361db7a65b4978355b9a2a181805c7p@chr8:48758335..48758346, -
5.25e-43FFCP PHASE1:Hg19::chr4:88449898..88449925,-#_b03fb04185de5835f1dbff65ae7412e0p14@SPARCL1
5.25e-43FFCP PHASE1:Hg19::chr5:160717223..160717234,-#_b03fb04185de5835f1dbff65ae7412e0p@chr5:160717223..160717234, -
5.25e-43FFCP PHASE2:Hg19::chr4:88451026..88451042,-#_b03fb04185de5835f1dbff65ae7412e0p15@SPARCL1
5.25e-43FFCP PHASE1:Hg19::chr4:88451026..88451042,-#_b03fb04185de5835f1dbff65ae7412e0p15@SPARCL1
5.25e-43FFCP PHASE2:Hg19::chr4:88449898..88449925,-#_b03fb04185de5835f1dbff65ae7412e0p14@SPARCL1
5.25e-43FFCP PHASE2:Hg19::chr5:160717223..160717234,-#_b03fb04185de5835f1dbff65ae7412e0p@chr5:160717223..160717234, -
8.09e-43FFCP PHASE2:Hg19::chr7:14942334..14942341,-#_1d94bdf2ad19473f7fd1437178079416p9@DGKB
8.09e-43FFCP PHASE1:Hg19::chr7:14942334..14942341,-#_1d94bdf2ad19473f7fd1437178079416p9@DGKB

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